Strain Fitness in Pseudomonas sp. RS175 around PFR28_04318

Experiment: methyl-trans-p-coumarate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methyl-trans-p-coumarate (C)
4,925,553	+		PFR28_04317	0.58	+1.4
4,925,553	+		PFR28_04317	0.58	-0.2
4,925,553	+		PFR28_04317	0.58	+0.4
4,925,553	+		PFR28_04317	0.58	-2.1
4,925,553	+		PFR28_04317	0.58	-0.9
4,925,553	+		PFR28_04317	0.58	-0.3
4,925,553	+		PFR28_04317	0.58	+0.5
4,925,554	-		PFR28_04317	0.58	+0.0
4,925,554	-		PFR28_04317	0.58	-0.3
4,925,554	-		PFR28_04317	0.58	-1.6
4,925,554	-		PFR28_04317	0.58	-0.1
4,925,554	-		PFR28_04317	0.58	-1.0
4,925,769	+		PFR28_04317	0.72	-0.8
4,925,769	+		PFR28_04317	0.72	-1.3
4,925,769	+		PFR28_04317	0.72	-0.6
4,925,769	+		PFR28_04317	0.72	+0.7
4,925,770	-		PFR28_04317	0.72	-0.4
4,925,770	-		PFR28_04317	0.72	-2.7
4,925,770	-		PFR28_04317	0.72	-0.9
4,925,770	-		PFR28_04317	0.72	-0.2
4,925,770	-		PFR28_04317	0.72	-0.3
4,925,770	-		PFR28_04317	0.72	-0.2
4,925,775	+		PFR28_04317	0.72	-0.8
4,925,775	+		PFR28_04317	0.72	+0.1
4,925,775	+		PFR28_04317	0.72	+1.0
4,925,775	+		PFR28_04317	0.72	-0.1
4,925,775	+		PFR28_04317	0.72	-0.0
4,925,775	+		PFR28_04317	0.72	-0.6
4,925,775	+		PFR28_04317	0.72	-0.9
4,925,775	+		PFR28_04317	0.72	-0.2
4,925,776	-		PFR28_04317	0.72	+0.9
4,925,776	-		PFR28_04317	0.72	-0.2
4,925,776	-		PFR28_04317	0.72	-1.7
4,925,776	-		PFR28_04317	0.72	-0.4
4,925,776	-		PFR28_04317	0.72	-2.2
4,925,776	-		PFR28_04317	0.72	+0.2
4,925,776	-		PFR28_04317	0.72	+0.8
4,925,776	-		PFR28_04317	0.72	+0.8
4,925,776	-		PFR28_04317	0.72	-1.7
4,925,776	-		PFR28_04317	0.72	+0.5
4,925,781	+		PFR28_04317	0.72	+0.2
4,925,781	+		PFR28_04317	0.72	-1.4
4,925,781	+		PFR28_04317	0.72	+0.6
4,925,781	+		PFR28_04317	0.72	-1.8
4,925,781	+		PFR28_04317	0.72	-2.3
4,925,782	-		PFR28_04317	0.73	-0.2
4,925,782	-		PFR28_04317	0.73	+0.2
4,925,782	-		PFR28_04317	0.73	-0.4
4,925,782	-		PFR28_04317	0.73	+0.8
4,925,782	-		PFR28_04317	0.73	-1.4
4,925,782	-		PFR28_04317	0.73	+0.2
4,925,782	-		PFR28_04317	0.73	+0.4
4,925,782	-		PFR28_04317	0.73	+0.9
4,925,782	-		PFR28_04317	0.73	+0.1
4,925,782	-		PFR28_04317	0.73	+1.4
4,925,782	-		PFR28_04317	0.73	-0.4
4,925,925	+		PFR28_04317	0.81	+0.3
4,925,925	+		PFR28_04317	0.81	-1.7
4,925,925	+		PFR28_04317	0.81	-0.1
4,925,925	+		PFR28_04317	0.81	+1.8
4,925,925	+		PFR28_04317	0.81	+0.7
4,925,925	+		PFR28_04317	0.81	-2.7
4,925,925	+		PFR28_04317	0.81	+1.4
4,925,925	+		PFR28_04317	0.81	+0.8
4,925,926	-		PFR28_04317	0.81	-0.3
4,925,926	-		PFR28_04317	0.81	+0.6
4,925,926	-		PFR28_04317	0.81	+0.6
4,925,926	-		PFR28_04317	0.81	-0.3
4,925,926	-		PFR28_04317	0.81	-0.3
4,925,926	-		PFR28_04317	0.81	+0.6
4,925,926	-		PFR28_04317	0.81	-0.3
4,925,926	-		PFR28_04317	0.81	+0.5
4,926,271	+				-0.9
4,926,271	+				-1.0
4,926,271	+				-0.1
4,926,271	+				-0.1
4,926,271	+				-1.1
4,926,271	+				-1.2
4,926,271	+				+0.5
4,926,271	+				+1.6
4,926,271	+				-1.9
4,926,271	+				+1.8
4,926,271	+				+0.1
4,926,271	+				-2.1
4,926,271	+				+2.0
4,926,271	+				+0.9
4,926,272	-				-0.5
4,926,272	-				+0.0
4,926,272	-				-0.1
4,926,272	-				+0.4
4,926,272	-				-1.0
4,926,272	-				-0.9
4,926,272	-				-0.2
4,926,272	-				+0.1
4,926,272	-				+0.4
4,926,272	-				-1.2
4,926,272	-				+0.4
4,926,272	-				-0.4
4,926,272	-				-0.1
4,926,276	+				+0.5
4,926,277	-				+0.7
4,926,277	-				-1.2
4,926,277	-				+0.4
4,926,277	-				-0.4
4,926,667	+		PFR28_04318	0.23	+0.3
4,926,667	+		PFR28_04318	0.23	-1.6
4,926,667	+		PFR28_04318	0.23	-1.1
4,926,667	+		PFR28_04318	0.23	+1.1
4,926,667	+		PFR28_04318	0.23	+0.8
4,926,667	+		PFR28_04318	0.23	-1.2
4,926,667	+		PFR28_04318	0.23	+0.1
4,926,667	+		PFR28_04318	0.23	+0.6
4,926,667	+		PFR28_04318	0.23	-0.1
4,926,668	-		PFR28_04318	0.23	+0.2
4,926,668	-		PFR28_04318	0.23	-0.1
4,926,778	+		PFR28_04318	0.34	+0.6
4,926,778	+		PFR28_04318	0.34	+1.6
4,926,778	+		PFR28_04318	0.34	+0.7
4,926,778	+		PFR28_04318	0.34	+0.0
4,926,778	+		PFR28_04318	0.34	-2.2
4,926,778	+		PFR28_04318	0.34	+0.2
4,926,778	+		PFR28_04318	0.34	+0.8
4,926,779	-		PFR28_04318	0.34	-1.2
4,926,779	-		PFR28_04318	0.34	+0.3
4,926,779	-		PFR28_04318	0.34	-0.3
4,926,779	-		PFR28_04318	0.34	+0.7
4,926,779	-		PFR28_04318	0.34	-1.5
4,926,779	-		PFR28_04318	0.34	+0.4
4,926,779	-		PFR28_04318	0.34	+0.3
4,926,781	+		PFR28_04318	0.34	+0.6
4,926,781	+		PFR28_04318	0.34	-0.9
4,926,781	+		PFR28_04318	0.34	-0.9
4,926,781	+		PFR28_04318	0.34	-0.2
4,926,781	+		PFR28_04318	0.34	-1.4
4,926,781	+		PFR28_04318	0.34	-1.3
4,926,781	+		PFR28_04318	0.34	+1.4
4,926,781	+		PFR28_04318	0.34	+1.1
4,926,781	+		PFR28_04318	0.34	+0.7
4,926,781	+		PFR28_04318	0.34	-0.0
4,926,781	+		PFR28_04318	0.34	+0.2
4,926,781	+		PFR28_04318	0.34	+0.8
4,926,781	+		PFR28_04318	0.34	+1.2
4,926,782	-		PFR28_04318	0.34	-0.3
4,926,782	-		PFR28_04318	0.34	+0.2
4,926,782	-		PFR28_04318	0.34	+0.4
4,926,782	-		PFR28_04318	0.34	+0.5
4,926,782	-		PFR28_04318	0.34	-0.1
4,926,782	-		PFR28_04318	0.34	+0.2
4,926,840	-		PFR28_04318	0.40	+0.7
4,926,949	+		PFR28_04318	0.51	+0.6
4,926,950	-		PFR28_04318	0.51	-3.1
4,926,950	-		PFR28_04318	0.51	+0.2
4,926,950	-		PFR28_04318	0.51	-3.2
4,927,012	+		PFR28_04318	0.57	-0.6
4,927,012	+		PFR28_04318	0.57	-1.2
4,927,012	+		PFR28_04318	0.57	+1.3
4,927,012	+		PFR28_04318	0.57	+1.2
4,927,012	+		PFR28_04318	0.57	+0.1
4,927,012	+		PFR28_04318	0.57	+1.5
4,927,012	+		PFR28_04318	0.57	+1.0
4,927,012	+		PFR28_04318	0.57	+0.7
4,927,012	+		PFR28_04318	0.57	+1.0
4,927,012	+		PFR28_04318	0.57	+0.7
4,927,012	+		PFR28_04318	0.57	+0.5
4,927,012	+		PFR28_04318	0.57	+0.3
4,927,012	+		PFR28_04318	0.57	-0.2
4,927,013	-		PFR28_04318	0.57	+0.1
4,927,013	-		PFR28_04318	0.57	+0.7
4,927,013	-		PFR28_04318	0.57	+2.6
4,927,013	-		PFR28_04318	0.57	+0.8
4,927,013	-		PFR28_04318	0.57	-0.7
4,927,013	-		PFR28_04318	0.57	-0.5
4,927,013	-		PFR28_04318	0.57	-0.9
4,927,013	-		PFR28_04318	0.57	+1.4
4,927,013	-		PFR28_04318	0.57	-0.1
4,927,013	-		PFR28_04318	0.57	+0.9
4,927,013	-		PFR28_04318	0.57	+3.2
4,927,013	-		PFR28_04318	0.57	+0.5
4,927,013	-		PFR28_04318	0.57	-0.7
4,927,013	-		PFR28_04318	0.57	+0.2
4,927,013	-		PFR28_04318	0.57	+0.6
4,927,013	-		PFR28_04318	0.57	-0.1
4,927,013	-		PFR28_04318	0.57	+0.4
4,927,016	+		PFR28_04318	0.58	+0.7
4,927,016	+		PFR28_04318	0.58	+0.3
4,927,016	+		PFR28_04318	0.58	-1.8
4,927,017	-		PFR28_04318	0.58	+0.1
4,927,017	-		PFR28_04318	0.58	+0.1
4,927,017	-		PFR28_04318	0.58	+0.0
4,927,017	-		PFR28_04318	0.58	-0.8
4,927,017	-		PFR28_04318	0.58	+0.3
4,927,304	+		PFR28_04318	0.86	+0.7
4,927,304	+		PFR28_04318	0.86	-0.3
4,927,304	+		PFR28_04318	0.86	-0.5
4,927,304	+		PFR28_04318	0.86	-0.1
4,927,304	+		PFR28_04318	0.86	-1.2
4,927,304	+		PFR28_04318	0.86	-0.2
4,927,305	-		PFR28_04318	0.86	-0.0
4,927,305	-		PFR28_04318	0.86	-0.8
4,927,305	-		PFR28_04318	0.86	-0.6
4,927,305	-		PFR28_04318	0.86	+0.6
4,927,305	-		PFR28_04318	0.86	+1.5
4,927,305	-		PFR28_04318	0.86	-1.6
4,927,309	+		PFR28_04318	0.87	+0.4
4,927,309	+		PFR28_04318	0.87	+0.8
4,927,309	+		PFR28_04318	0.87	+0.4
4,927,309	+		PFR28_04318	0.87	+0.1
4,927,309	+		PFR28_04318	0.87	+0.8
4,927,309	+		PFR28_04318	0.87	+0.8
4,927,309	+		PFR28_04318	0.87	-2.1
4,927,310	-		PFR28_04318	0.87	+0.5
4,927,310	-		PFR28_04318	0.87	+1.8
4,927,310	-		PFR28_04318	0.87	-0.0
4,927,310	-		PFR28_04318	0.87	+1.1
4,927,310	-		PFR28_04318	0.87	+0.3
4,927,310	-		PFR28_04318	0.87	+1.1
4,927,310	-		PFR28_04318	0.87	+0.0
4,927,310	-		PFR28_04318	0.87	+0.6
4,927,344	-				+0.6
4,927,354	+				-1.0
4,927,354	+				+1.4
4,927,355	-				-0.6
4,927,355	-				+0.6
4,927,355	-				+0.4
4,927,445	+				-0.2
4,927,446	-				+1.2
4,927,460	+				+0.9
4,927,461	-				+1.4
4,927,461	-				+1.1
4,927,480	-				+0.2
4,927,608	-				+1.1