Strain Fitness in Pseudomonas sp. RS175 around PFR28_03611

Experiment: 4-Acetoxy-3-methoxycinnamic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Acetoxy-3-methoxycinnamic (C)
4,170,107	+		PFR28_03610	0.28	+0.6
4,170,107	+		PFR28_03610	0.28	+0.4
4,170,108	-		PFR28_03610	0.28	+1.7
4,170,224	-		PFR28_03610	0.38	+1.0
4,170,224	-		PFR28_03610	0.38	-0.2
4,170,481	+		PFR28_03610	0.61	-0.8
4,170,481	+		PFR28_03610	0.61	+0.1
4,170,481	+		PFR28_03610	0.61	+1.4
4,170,481	+		PFR28_03610	0.61	-1.3
4,170,481	+		PFR28_03610	0.61	+0.8
4,170,481	+		PFR28_03610	0.61	+0.1
4,170,481	+		PFR28_03610	0.61	-2.6
4,170,481	+		PFR28_03610	0.61	+1.0
4,170,481	+		PFR28_03610	0.61	-0.8
4,170,481	+		PFR28_03610	0.61	-1.3
4,170,481	+		PFR28_03610	0.61	-0.3
4,170,481	+		PFR28_03610	0.61	-1.6
4,170,481	+		PFR28_03610	0.61	-0.6
4,170,481	+		PFR28_03610	0.61	+0.4
4,170,481	+		PFR28_03610	0.61	+1.2
4,170,481	+		PFR28_03610	0.61	+0.9
4,170,481	+		PFR28_03610	0.61	-0.9
4,170,481	+		PFR28_03610	0.61	-3.1
4,170,482	-		PFR28_03610	0.61	+0.9
4,170,482	-		PFR28_03610	0.61	-0.3
4,170,482	-		PFR28_03610	0.61	-0.8
4,170,482	-		PFR28_03610	0.61	-0.2
4,170,482	-		PFR28_03610	0.61	-0.5
4,170,482	-		PFR28_03610	0.61	+0.0
4,170,482	-		PFR28_03610	0.61	+0.1
4,170,482	-		PFR28_03610	0.61	+0.2
4,170,482	-		PFR28_03610	0.61	-0.3
4,170,482	-		PFR28_03610	0.61	-0.3
4,170,482	-		PFR28_03610	0.61	+0.6
4,170,482	-		PFR28_03610	0.61	+0.2
4,170,482	-		PFR28_03610	0.61	+1.7
4,170,482	-		PFR28_03610	0.61	-0.8
4,170,595	+		PFR28_03610	0.71	+0.8
4,170,595	+		PFR28_03610	0.71	-1.0
4,170,595	+		PFR28_03610	0.71	-1.3
4,170,595	+		PFR28_03610	0.71	+0.1
4,170,595	+		PFR28_03610	0.71	-0.3
4,170,596	-		PFR28_03610	0.71	+1.3
4,170,596	-		PFR28_03610	0.71	-0.8
4,170,596	-		PFR28_03610	0.71	+0.6
4,170,596	-		PFR28_03610	0.71	+0.6
4,170,596	-		PFR28_03610	0.71	-0.3
4,170,596	-		PFR28_03610	0.71	-0.6
4,170,596	-		PFR28_03610	0.71	-0.3
4,170,634	+		PFR28_03610	0.74	+0.4
4,170,634	+		PFR28_03610	0.74	+1.7
4,170,634	+		PFR28_03610	0.74	-1.8
4,170,634	+		PFR28_03610	0.74	-3.5
4,170,634	+		PFR28_03610	0.74	-1.3
4,170,634	+		PFR28_03610	0.74	-3.7
4,170,635	-		PFR28_03610	0.74	-0.6
4,170,635	-		PFR28_03610	0.74	-1.3
4,170,635	-		PFR28_03610	0.74	-0.8
4,170,635	-		PFR28_03610	0.74	+0.4
4,170,645	+		PFR28_03610	0.75	+0.1
4,170,646	-		PFR28_03610	0.75	+0.7
4,170,719	-		PFR28_03610	0.82	+1.8
4,170,745	+		PFR28_03610	0.84	-0.7
4,170,745	+		PFR28_03610	0.84	+0.4
4,170,746	-		PFR28_03610	0.84	-0.6
4,170,746	-		PFR28_03610	0.84	+0.3
4,170,746	-		PFR28_03610	0.84	+0.5
4,170,746	-		PFR28_03610	0.84	+0.4
4,170,813	-				-1.0
4,170,813	-				-0.1
4,170,813	-				-0.8
4,170,813	-				-0.6
4,170,841	+				+0.7
4,170,873	+				+0.5
4,170,873	+				+0.7
4,170,873	+				+1.2
4,170,873	+				-1.3
4,170,971	+				-0.7
4,170,971	+				+1.0
4,170,971	+				-1.1
4,170,972	-				+0.5
4,171,052	+				-3.5
4,171,054	+				-1.3
4,171,071	+				+0.7
4,171,071	+				+0.7
4,171,072	-				-0.9
4,171,489	+		PFR28_03611	0.42	-0.9
4,171,489	+		PFR28_03611	0.42	-0.6
4,171,490	-		PFR28_03611	0.42	+1.6
4,171,490	-		PFR28_03611	0.42	-1.6
4,171,490	-		PFR28_03611	0.42	-0.6
4,171,490	-		PFR28_03611	0.42	-2.5
4,171,490	-		PFR28_03611	0.42	-1.8
4,171,612	+		PFR28_03611	0.54	-2.8
4,171,612	+		PFR28_03611	0.54	-2.5
4,171,612	+		PFR28_03611	0.54	-1.7
4,171,612	+		PFR28_03611	0.54	-2.0
4,171,612	+		PFR28_03611	0.54	-0.6
4,171,612	+		PFR28_03611	0.54	-1.2
4,171,612	+		PFR28_03611	0.54	-1.0
4,171,612	+		PFR28_03611	0.54	-2.2
4,171,612	+		PFR28_03611	0.54	+0.4
4,171,612	+		PFR28_03611	0.54	-1.5
4,171,612	+		PFR28_03611	0.54	-2.1
4,171,612	+		PFR28_03611	0.54	+0.3
4,171,612	+		PFR28_03611	0.54	+0.4
4,171,612	+		PFR28_03611	0.54	-0.8
4,171,612	+		PFR28_03611	0.54	-4.1
4,171,612	+		PFR28_03611	0.54	-2.5
4,171,613	-		PFR28_03611	0.54	-1.2
4,171,613	-		PFR28_03611	0.54	-3.6
4,171,613	-		PFR28_03611	0.54	-0.6
4,171,613	-		PFR28_03611	0.54	-4.1
4,171,613	-		PFR28_03611	0.54	-0.6
4,171,613	-		PFR28_03611	0.54	-1.7
4,171,613	-		PFR28_03611	0.54	-0.3
4,171,613	-		PFR28_03611	0.54	-1.7
4,171,613	-		PFR28_03611	0.54	-4.1
4,171,613	-		PFR28_03611	0.54	-1.8
4,171,613	-		PFR28_03611	0.54	-1.5
4,171,613	-		PFR28_03611	0.54	-1.3
4,171,613	-		PFR28_03611	0.54	-2.4
4,171,618	+		PFR28_03611	0.55	-0.6
4,171,618	+		PFR28_03611	0.55	-3.3
4,171,618	+		PFR28_03611	0.55	-3.3
4,171,618	+		PFR28_03611	0.55	-3.4
4,171,618	+		PFR28_03611	0.55	-3.1
4,171,618	+		PFR28_03611	0.55	-3.1
4,171,618	+		PFR28_03611	0.55	-1.3
4,171,619	-		PFR28_03611	0.55	-0.6
4,171,619	-		PFR28_03611	0.55	-1.3
4,171,619	-		PFR28_03611	0.55	-1.9
4,171,619	-		PFR28_03611	0.55	-0.9
4,171,619	-		PFR28_03611	0.55	-0.3
4,171,619	-		PFR28_03611	0.55	-0.8
4,171,619	-		PFR28_03611	0.55	-1.8
4,171,619	-		PFR28_03611	0.55	-0.8
4,171,619	-		PFR28_03611	0.55	-2.9
4,171,619	-		PFR28_03611	0.55	-0.8
4,171,679	-		PFR28_03611	0.61	+1.9
4,171,679	-		PFR28_03611	0.61	-1.6
4,171,679	-		PFR28_03611	0.61	-3.4
4,171,679	-		PFR28_03611	0.61	-2.7
4,171,679	-		PFR28_03611	0.61	+0.6
4,171,679	-		PFR28_03611	0.61	-2.1
4,171,679	-		PFR28_03611	0.61	-3.0
4,171,696	+		PFR28_03611	0.63	-0.8
4,171,696	+		PFR28_03611	0.63	-4.0
4,171,696	+		PFR28_03611	0.63	-0.6
4,171,696	+		PFR28_03611	0.63	+0.7
4,171,696	+		PFR28_03611	0.63	-1.9
4,171,697	-		PFR28_03611	0.63	-0.6
4,171,697	-		PFR28_03611	0.63	-4.4
4,171,697	-		PFR28_03611	0.63	-0.3
4,171,697	-		PFR28_03611	0.63	-2.0
4,171,888	+		PFR28_03611	0.82	-0.9
4,171,888	+		PFR28_03611	0.82	-2.0
4,171,889	-		PFR28_03611	0.82	-0.8
4,171,889	-		PFR28_03611	0.82	-0.4
4,171,907	+		PFR28_03611	0.84	-2.0
4,171,908	-		PFR28_03611	0.84	-0.4
4,171,908	-		PFR28_03611	0.84	-3.1
4,171,908	-		PFR28_03611	0.84	-3.1
4,171,963	+		PFR28_03611	0.89	-2.1
4,171,963	+		PFR28_03611	0.89	-3.7
4,171,963	+		PFR28_03611	0.89	-2.2
4,171,963	+		PFR28_03611	0.89	-3.9
4,171,963	+		PFR28_03611	0.89	-0.7
4,171,963	+		PFR28_03611	0.89	-2.6
4,171,963	+		PFR28_03611	0.89	-1.4
4,171,964	-		PFR28_03611	0.90	-0.0
4,171,964	-		PFR28_03611	0.90	-0.9
4,171,964	-		PFR28_03611	0.90	-2.3
4,171,964	-		PFR28_03611	0.90	-1.0
4,171,964	-		PFR28_03611	0.90	-1.1
4,171,964	-		PFR28_03611	0.90	-0.2
4,171,964	-		PFR28_03611	0.90	-0.5
4,172,260	+				+0.6
4,172,356	+				-2.0
4,172,357	-				+1.7
4,172,357	-				+0.7
4,172,357	-				-1.3
4,172,410	+		PFR28_03612	0.15	-1.1
4,172,521	+		PFR28_03612	0.26	-1.5
4,172,522	-		PFR28_03612	0.26	+1.7
4,172,522	-		PFR28_03612	0.26	+0.7
4,172,714	-		PFR28_03612	0.45	-0.6
4,172,845	+		PFR28_03612	0.57	+1.7
4,172,845	+		PFR28_03612	0.57	-1.1
4,172,846	-		PFR28_03612	0.58	+0.7