Strain Fitness in Pseudomonas sp. RS175 around PFR28_03389

Experiment: 4-Acetoxy-3-methoxycinnamic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Acetoxy-3-methoxycinnamic (C)
3,898,201	+		PFR28_03388	0.45	-0.3
3,898,225	+		PFR28_03388	0.47	+0.3
3,898,226	-		PFR28_03388	0.48	-2.5
3,898,227	+		PFR28_03388	0.48	+0.1
3,898,227	+		PFR28_03388	0.48	+0.5
3,898,227	+		PFR28_03388	0.48	-0.9
3,898,227	+		PFR28_03388	0.48	-0.4
3,898,227	+		PFR28_03388	0.48	+0.9
3,898,227	+		PFR28_03388	0.48	-0.3
3,898,227	+		PFR28_03388	0.48	-1.8
3,898,227	+		PFR28_03388	0.48	+0.4
3,898,227	+		PFR28_03388	0.48	-0.1
3,898,227	+		PFR28_03388	0.48	-0.7
3,898,227	+		PFR28_03388	0.48	-1.6
3,898,227	+		PFR28_03388	0.48	-0.7
3,898,227	+		PFR28_03388	0.48	+0.6
3,898,227	+		PFR28_03388	0.48	-0.9
3,898,227	+		PFR28_03388	0.48	+0.2
3,898,227	+		PFR28_03388	0.48	-0.6
3,898,227	+		PFR28_03388	0.48	-0.8
3,898,228	-		PFR28_03388	0.48	+0.8
3,898,228	-		PFR28_03388	0.48	-0.7
3,898,228	-		PFR28_03388	0.48	+0.1
3,898,228	-		PFR28_03388	0.48	-0.8
3,898,228	-		PFR28_03388	0.48	-0.1
3,898,228	-		PFR28_03388	0.48	-1.0
3,898,228	-		PFR28_03388	0.48	+0.1
3,898,228	-		PFR28_03388	0.48	-2.0
3,898,228	-		PFR28_03388	0.48	-1.3
3,898,228	-		PFR28_03388	0.48	-2.3
3,898,228	-		PFR28_03388	0.48	-1.0
3,898,228	-		PFR28_03388	0.48	+0.4
3,898,362	+		PFR28_03388	0.60	-0.9
3,898,362	+		PFR28_03388	0.60	-3.3
3,898,362	+		PFR28_03388	0.60	-1.3
3,898,362	+		PFR28_03388	0.60	-0.1
3,898,362	+		PFR28_03388	0.60	-2.4
3,898,362	+		PFR28_03388	0.60	+0.5
3,898,362	+		PFR28_03388	0.60	+1.1
3,898,362	+		PFR28_03388	0.60	-0.3
3,898,362	+		PFR28_03388	0.60	-1.8
3,898,362	+		PFR28_03388	0.60	+1.1
3,898,362	+		PFR28_03388	0.60	-1.9
3,898,363	-		PFR28_03388	0.61	-0.1
3,898,363	-		PFR28_03388	0.61	-0.5
3,898,363	-		PFR28_03388	0.61	-4.2
3,898,363	-		PFR28_03388	0.61	+0.7
3,898,363	-		PFR28_03388	0.61	-0.4
3,898,363	-		PFR28_03388	0.61	-1.9
3,898,467	-		PFR28_03388	0.70	-0.1
3,898,632	+		PFR28_03388	0.86	-4.8
3,898,632	+		PFR28_03388	0.86	-2.5
3,898,633	-		PFR28_03388	0.86	-2.1
3,898,754	+				-3.5
3,898,754	+				-0.4
3,898,754	+				-1.2
3,898,755	-				+0.3
3,898,820	+				-0.4
3,898,821	-				+1.1
3,898,821	-				+0.8
3,898,821	-				+0.9
3,898,822	+				+0.7
3,898,822	+				+0.5
3,898,822	+				-0.7
3,898,822	+				-0.7
3,898,822	+				+0.4
3,898,822	+				+0.6
3,898,822	+				+0.7
3,898,822	+				+0.0
3,898,822	+				-1.9
3,898,822	+				-3.5
3,898,822	+				+0.6
3,898,823	-				+1.8
3,898,823	-				-2.7
3,898,823	-				+0.7
3,898,823	-				-1.4
3,898,823	-				-1.5
3,898,903	+				-1.7
3,899,021	+				-0.7
3,899,022	-				-1.0
3,899,115	+				-2.4
3,899,115	+				-1.7
3,899,115	+				+2.7
3,899,115	+				-2.6
3,899,115	+				-1.5
3,899,115	+				+0.3
3,899,115	+				-1.0
3,899,116	-				+0.0
3,899,116	-				-1.1
3,899,116	-				-3.5
3,899,151	+				-1.4
3,899,152	-				+1.7
3,899,241	+				-2.6
3,899,241	+				-0.7
3,899,241	+				-3.2
3,899,241	+				-0.6
3,899,241	+				-1.3
3,899,241	+				-0.9
3,899,241	+				+0.1
3,899,242	-				-1.1
3,899,242	-				+0.0
3,899,242	-				-1.7
3,899,242	-				-0.2
3,899,242	-				-1.0
3,899,242	-				-2.2
3,899,242	-				-3.6
3,899,498	+		PFR28_03389	0.20	+0.7
3,899,498	+		PFR28_03389	0.20	-3.4
3,899,498	+		PFR28_03389	0.20	+0.9
3,899,498	+		PFR28_03389	0.20	-1.2
3,899,498	+		PFR28_03389	0.20	-3.2
3,899,499	-		PFR28_03389	0.20	-3.6
3,899,499	-		PFR28_03389	0.20	+0.4
3,899,499	-		PFR28_03389	0.20	-3.4
3,899,534	+		PFR28_03389	0.22	-3.4
3,899,534	+		PFR28_03389	0.22	-3.2
3,899,535	-		PFR28_03389	0.22	-3.2
3,899,535	-		PFR28_03389	0.22	-2.3
3,899,535	-		PFR28_03389	0.22	-1.9
3,899,535	-		PFR28_03389	0.22	-0.9
3,899,535	-		PFR28_03389	0.22	+2.0
3,899,535	-		PFR28_03389	0.22	-3.1
3,899,540	+		PFR28_03389	0.23	-2.4
3,899,540	+		PFR28_03389	0.23	-3.9
3,899,579	+		PFR28_03389	0.25	-0.1
3,899,636	+		PFR28_03389	0.28	-2.2
3,899,636	+		PFR28_03389	0.28	-2.5
3,899,637	-		PFR28_03389	0.28	-1.5
3,899,637	-		PFR28_03389	0.28	-2.7
3,899,644	-		PFR28_03389	0.28	-1.0
3,899,712	-		PFR28_03389	0.32	+1.0
3,899,712	-		PFR28_03389	0.32	-3.6
3,899,712	-		PFR28_03389	0.32	-3.5
3,899,714	+		PFR28_03389	0.32	-0.6
3,899,714	+		PFR28_03389	0.32	-2.5
3,899,714	+		PFR28_03389	0.32	-1.2
3,899,714	+		PFR28_03389	0.32	-2.4
3,899,714	+		PFR28_03389	0.32	-1.9
3,899,714	+		PFR28_03389	0.32	-1.5
3,899,714	+		PFR28_03389	0.32	+0.6
3,899,714	+		PFR28_03389	0.32	-0.7
3,899,714	+		PFR28_03389	0.32	-3.9
3,899,714	+		PFR28_03389	0.32	+0.1
3,899,714	+		PFR28_03389	0.32	+0.7
3,899,715	-		PFR28_03389	0.32	-1.7
3,899,715	-		PFR28_03389	0.32	-2.8
3,899,715	-		PFR28_03389	0.32	+1.7
3,899,715	-		PFR28_03389	0.32	-1.1
3,899,715	-		PFR28_03389	0.32	-0.3
3,899,715	-		PFR28_03389	0.32	-4.2
3,899,715	-		PFR28_03389	0.32	-2.7
3,899,715	-		PFR28_03389	0.32	-2.1
3,899,715	-		PFR28_03389	0.32	-0.2
3,899,715	-		PFR28_03389	0.32	-4.4
3,899,715	-		PFR28_03389	0.32	-3.0
3,899,715	-		PFR28_03389	0.32	-0.9
3,899,720	+		PFR28_03389	0.32	-3.0
3,899,720	+		PFR28_03389	0.32	-2.3
3,899,720	+		PFR28_03389	0.32	+0.1
3,899,720	+		PFR28_03389	0.32	-3.3
3,899,720	+		PFR28_03389	0.32	-2.4
3,899,720	+		PFR28_03389	0.32	-0.5
3,899,720	+		PFR28_03389	0.32	-1.8
3,899,721	-		PFR28_03389	0.32	+0.7
3,899,721	-		PFR28_03389	0.32	-2.2
3,899,721	-		PFR28_03389	0.32	-1.7
3,899,721	-		PFR28_03389	0.32	-0.1
3,899,855	+		PFR28_03389	0.40	-0.2
3,899,855	+		PFR28_03389	0.40	-1.2
3,899,855	+		PFR28_03389	0.40	-1.7
3,899,855	+		PFR28_03389	0.40	-0.9
3,899,855	+		PFR28_03389	0.40	-3.4
3,899,855	+		PFR28_03389	0.40	-1.6
3,899,855	+		PFR28_03389	0.40	-1.3
3,899,855	+		PFR28_03389	0.40	-2.0
3,899,855	+		PFR28_03389	0.40	-2.1
3,899,855	+		PFR28_03389	0.40	-2.3
3,899,855	+		PFR28_03389	0.40	-3.3
3,899,855	+		PFR28_03389	0.40	-0.7
3,899,855	+		PFR28_03389	0.40	-0.4
3,899,856	-		PFR28_03389	0.40	-1.8
3,899,856	-		PFR28_03389	0.40	-1.1
3,899,856	-		PFR28_03389	0.40	-1.1
3,899,856	-		PFR28_03389	0.40	+0.3
3,899,856	-		PFR28_03389	0.40	-1.6
3,899,856	-		PFR28_03389	0.40	-1.3
3,899,856	-		PFR28_03389	0.40	+0.2
3,899,856	-		PFR28_03389	0.40	-0.9
3,899,861	+		PFR28_03389	0.40	-1.3
3,899,861	+		PFR28_03389	0.40	-0.7
3,899,861	+		PFR28_03389	0.40	-2.7
3,899,861	+		PFR28_03389	0.40	-1.3
3,899,861	+		PFR28_03389	0.40	-0.5
3,899,862	-		PFR28_03389	0.40	-1.7
3,899,862	-		PFR28_03389	0.40	-3.1
3,899,862	-		PFR28_03389	0.40	-1.4
3,899,862	-		PFR28_03389	0.40	-0.7
3,899,862	-		PFR28_03389	0.40	-1.9
3,899,862	-		PFR28_03389	0.40	-1.0
3,899,862	-		PFR28_03389	0.40	-1.7
3,899,960	+		PFR28_03389	0.45	-1.1
3,899,960	+		PFR28_03389	0.45	-3.0
3,899,960	+		PFR28_03389	0.45	-2.8
3,899,960	+		PFR28_03389	0.45	+0.0
3,899,961	-		PFR28_03389	0.45	-0.6
3,899,961	-		PFR28_03389	0.45	-3.7
3,899,961	-		PFR28_03389	0.45	-4.2
3,899,970	+		PFR28_03389	0.46	-1.6
3,899,970	+		PFR28_03389	0.46	-3.3
3,899,970	+		PFR28_03389	0.46	-0.9
3,899,970	+		PFR28_03389	0.46	-0.4
3,899,970	+		PFR28_03389	0.46	-2.9
3,899,970	+		PFR28_03389	0.46	-0.5
3,899,970	+		PFR28_03389	0.46	-0.0
3,899,970	+		PFR28_03389	0.46	-0.7
3,899,970	+		PFR28_03389	0.46	-0.7
3,899,970	+		PFR28_03389	0.46	-2.8
3,899,970	+		PFR28_03389	0.46	-0.7
3,899,971	-		PFR28_03389	0.46	+0.0
3,899,971	-		PFR28_03389	0.46	-2.6
3,899,971	-		PFR28_03389	0.46	-1.9
3,899,971	-		PFR28_03389	0.46	-3.0
3,899,971	-		PFR28_03389	0.46	-3.8
3,899,971	-		PFR28_03389	0.46	+0.7
3,899,971	-		PFR28_03389	0.46	-1.1
3,899,971	-		PFR28_03389	0.46	-1.2
3,899,971	-		PFR28_03389	0.46	-1.0
3,899,971	-		PFR28_03389	0.46	-2.9
3,899,971	-		PFR28_03389	0.46	-4.1
3,899,971	-		PFR28_03389	0.46	-0.2
3,899,971	-		PFR28_03389	0.46	-0.3
3,900,017	+		PFR28_03389	0.48	-0.5
3,900,017	+		PFR28_03389	0.48	+1.7
3,900,017	+		PFR28_03389	0.48	-0.7
3,900,018	-		PFR28_03389	0.48	+1.7
3,900,068	+		PFR28_03389	0.51	-1.7
3,900,068	+		PFR28_03389	0.51	-4.2
3,900,068	+		PFR28_03389	0.51	-0.3
3,900,068	+		PFR28_03389	0.51	-3.8
3,900,068	+		PFR28_03389	0.51	-0.6
3,900,068	+		PFR28_03389	0.51	-1.9
3,900,068	+		PFR28_03389	0.51	+1.2
3,900,069	-		PFR28_03389	0.51	-0.6
3,900,069	-		PFR28_03389	0.51	+0.1
3,900,069	-		PFR28_03389	0.51	-4.4
3,900,069	-		PFR28_03389	0.51	-2.4
3,900,069	-		PFR28_03389	0.51	+0.3
3,900,069	-		PFR28_03389	0.51	-1.9
3,900,069	-		PFR28_03389	0.51	-1.2
3,900,069	-		PFR28_03389	0.51	-1.6
3,900,101	+		PFR28_03389	0.53	-1.3
3,900,101	+		PFR28_03389	0.53	-1.3
3,900,101	+		PFR28_03389	0.53	-0.8
3,900,101	+		PFR28_03389	0.53	-3.1
3,900,101	+		PFR28_03389	0.53	-1.6
3,900,102	-		PFR28_03389	0.53	-4.1
3,900,102	-		PFR28_03389	0.53	-1.4
3,900,102	-		PFR28_03389	0.53	-2.6
3,900,102	-		PFR28_03389	0.53	-3.2
3,900,102	-		PFR28_03389	0.53	-1.8
3,900,102	-		PFR28_03389	0.53	-3.0
3,900,102	-		PFR28_03389	0.53	-0.2
3,900,102	-		PFR28_03389	0.53	+0.5
3,900,103	+		PFR28_03389	0.53	-0.8
3,900,103	+		PFR28_03389	0.53	-1.4
3,900,103	+		PFR28_03389	0.53	-1.2
3,900,103	+		PFR28_03389	0.53	-1.1
3,900,103	+		PFR28_03389	0.53	-1.2
3,900,103	+		PFR28_03389	0.53	-2.7
3,900,103	+		PFR28_03389	0.53	+0.1
3,900,103	+		PFR28_03389	0.53	-2.8
3,900,104	-		PFR28_03389	0.53	-0.4
3,900,104	-		PFR28_03389	0.53	-1.5
3,900,104	-		PFR28_03389	0.53	-3.5
3,900,565	-		PFR28_03389	0.78	-2.2
3,900,572	+		PFR28_03389	0.78	-1.9
3,900,572	+		PFR28_03389	0.78	-1.3
3,900,572	+		PFR28_03389	0.78	-2.4
3,900,572	+		PFR28_03389	0.78	-1.4
3,900,572	+		PFR28_03389	0.78	-1.5
3,900,573	-		PFR28_03389	0.78	-0.9
3,900,573	-		PFR28_03389	0.78	-2.7
3,900,590	-		PFR28_03389	0.79	-4.7
3,900,720	-		PFR28_03389	0.86	-1.0
3,900,720	-		PFR28_03389	0.86	-1.3
3,900,741	+		PFR28_03389	0.87	-2.7
3,900,741	+		PFR28_03389	0.87	-3.2
3,900,742	-		PFR28_03389	0.87	-1.2
3,900,742	-		PFR28_03389	0.87	-0.9
3,900,833	-				-0.7
3,900,833	-				+0.1
3,901,003	+				-3.8
3,901,164	+		PFR28_03390	0.20	-2.2
3,901,207	+		PFR28_03390	0.25	-0.7
3,901,208	-		PFR28_03390	0.25	-1.7
3,901,208	-		PFR28_03390	0.25	-0.1
3,901,208	-		PFR28_03390	0.25	-1.4
3,901,208	-		PFR28_03390	0.25	-2.6
3,901,511	+		PFR28_03390	0.59	-1.3
3,901,528	+		PFR28_03390	0.61	-0.3
3,901,528	+		PFR28_03390	0.61	-1.3
3,901,528	+		PFR28_03390	0.61	-3.0
3,901,528	+		PFR28_03390	0.61	-2.4
3,901,528	+		PFR28_03390	0.61	-1.7
3,901,528	+		PFR28_03390	0.61	-1.5
3,901,529	-		PFR28_03390	0.61	-1.3
3,901,529	-		PFR28_03390	0.61	-1.3
3,901,529	-		PFR28_03390	0.61	-1.7
3,901,529	-		PFR28_03390	0.61	-0.7
3,901,529	-		PFR28_03390	0.61	-1.7
3,901,529	-		PFR28_03390	0.61	-2.9
3,901,529	-		PFR28_03390	0.61	+0.5
3,901,529	-		PFR28_03390	0.61	-0.9
3,901,529	-		PFR28_03390	0.61	-1.8
3,901,555	+		PFR28_03390	0.64	-1.7
3,901,555	+		PFR28_03390	0.64	-2.8
3,901,556	-		PFR28_03390	0.65	-0.5
3,901,556	-		PFR28_03390	0.65	-1.4
3,901,556	-		PFR28_03390	0.65	-1.0
3,901,556	-		PFR28_03390	0.65	-2.7
3,901,583	+		PFR28_03390	0.68	-1.5
3,901,584	-		PFR28_03390	0.68	-1.7
3,901,601	-		PFR28_03390	0.70	-1.8
3,901,601	-		PFR28_03390	0.70	-1.0
3,901,601	-		PFR28_03390	0.70	-1.0
3,901,601	-		PFR28_03390	0.70	-1.9
3,901,685	+		PFR28_03390	0.79	+0.1
3,901,686	-		PFR28_03390	0.79	-0.1
3,901,756	+		PFR28_03390	0.87	-3.0
3,901,756	+		PFR28_03390	0.87	-4.6
3,901,756	+		PFR28_03390	0.87	-3.1
3,901,757	-		PFR28_03390	0.87	-2.8
3,901,757	-		PFR28_03390	0.87	-2.4
3,901,757	-		PFR28_03390	0.87	-0.6
3,901,801	+				-1.8
3,901,916	+				+0.3
3,901,916	+				-0.9
3,901,916	+				-0.4
3,901,916	+				-0.9
3,901,916	+				-1.5
3,901,916	+				+0.6
3,901,917	-				-0.3
3,901,917	-				+1.2
3,901,917	-				-1.1
3,901,917	-				+2.0
3,901,917	-				+0.2
3,901,917	-				+0.7
3,901,917	-				-2.9