Strain Fitness in Bosea sp. OAE506 around ABIE41_RS09155

Experiment: DMSO control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS09150 and ABIE41_RS09155 are separated by 138 nucleotidesABIE41_RS09155 and ABIE41_RS09160 are separated by 180 nucleotides ABIE41_RS09150: ABIE41_RS09150 - 5-dehydro-2-deoxygluconokinase, at 1,894,970 to 1,896,904 _RS09150 ABIE41_RS09155: ABIE41_RS09155 - MurR/RpiR family transcriptional regulator, at 1,897,043 to 1,897,922 _RS09155 ABIE41_RS09160: ABIE41_RS09160 - aspartate/glutamate racemase family protein, at 1,898,103 to 1,898,849 _RS09160 Position (kb) 1897 1898Strain fitness (log2 ratio) -2 -1 0 1 2at 1896.069 kb on + strand, within ABIE41_RS09150at 1896.069 kb on + strand, within ABIE41_RS09150at 1896.069 kb on + strand, within ABIE41_RS09150at 1896.069 kb on + strand, within ABIE41_RS09150at 1896.069 kb on + strand, within ABIE41_RS09150at 1896.135 kb on + strand, within ABIE41_RS09150at 1896.135 kb on + strand, within ABIE41_RS09150at 1896.135 kb on + strand, within ABIE41_RS09150at 1896.136 kb on - strand, within ABIE41_RS09150at 1896.136 kb on - strand, within ABIE41_RS09150at 1896.324 kb on + strand, within ABIE41_RS09150at 1896.324 kb on + strand, within ABIE41_RS09150at 1896.324 kb on + strand, within ABIE41_RS09150at 1896.324 kb on + strand, within ABIE41_RS09150at 1896.325 kb on - strand, within ABIE41_RS09150at 1896.325 kb on - strand, within ABIE41_RS09150at 1896.397 kb on + strand, within ABIE41_RS09150at 1896.397 kb on + strand, within ABIE41_RS09150at 1896.416 kb on - strand, within ABIE41_RS09150at 1896.559 kb on - strand, within ABIE41_RS09150at 1896.559 kb on - strand, within ABIE41_RS09150at 1896.757 kb on + strandat 1896.758 kb on - strandat 1896.986 kb on + strandat 1897.420 kb on - strand, within ABIE41_RS09155at 1897.428 kb on + strand, within ABIE41_RS09155at 1897.428 kb on + strand, within ABIE41_RS09155at 1897.429 kb on - strand, within ABIE41_RS09155at 1897.443 kb on + strand, within ABIE41_RS09155at 1897.465 kb on + strand, within ABIE41_RS09155at 1897.466 kb on - strand, within ABIE41_RS09155at 1897.466 kb on - strand, within ABIE41_RS09155at 1897.466 kb on - strand, within ABIE41_RS09155at 1897.467 kb on + strand, within ABIE41_RS09155at 1897.467 kb on + strand, within ABIE41_RS09155at 1897.467 kb on + strand, within ABIE41_RS09155at 1897.467 kb on + strand, within ABIE41_RS09155at 1897.467 kb on + strand, within ABIE41_RS09155at 1897.467 kb on + strand, within ABIE41_RS09155at 1897.467 kb on + strand, within ABIE41_RS09155at 1897.467 kb on + strand, within ABIE41_RS09155at 1897.468 kb on - strand, within ABIE41_RS09155at 1897.468 kb on - strand, within ABIE41_RS09155at 1897.642 kb on + strand, within ABIE41_RS09155at 1897.642 kb on + strand, within ABIE41_RS09155at 1897.643 kb on - strand, within ABIE41_RS09155at 1897.643 kb on - strand, within ABIE41_RS09155at 1897.643 kb on - strand, within ABIE41_RS09155at 1897.643 kb on - strand, within ABIE41_RS09155at 1897.643 kb on - strand, within ABIE41_RS09155at 1898.229 kb on + strand, within ABIE41_RS09160at 1898.229 kb on + strand, within ABIE41_RS09160at 1898.229 kb on + strand, within ABIE41_RS09160at 1898.229 kb on + strand, within ABIE41_RS09160at 1898.230 kb on - strand, within ABIE41_RS09160at 1898.230 kb on - strand, within ABIE41_RS09160at 1898.230 kb on - strand, within ABIE41_RS09160at 1898.230 kb on - strand, within ABIE41_RS09160at 1898.231 kb on + strand, within ABIE41_RS09160at 1898.231 kb on + strand, within ABIE41_RS09160at 1898.232 kb on - strand, within ABIE41_RS09160at 1898.232 kb on - strand, within ABIE41_RS09160at 1898.276 kb on + strand, within ABIE41_RS09160at 1898.304 kb on + strand, within ABIE41_RS09160at 1898.305 kb on - strand, within ABIE41_RS09160at 1898.305 kb on - strand, within ABIE41_RS09160at 1898.470 kb on - strand, within ABIE41_RS09160

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Per-strain Table

Position Strand Gene LocusTag Fraction DMSO control
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1,896,069 + ABIE41_RS09150 0.57 +0.1
1,896,069 + ABIE41_RS09150 0.57 -0.0
1,896,069 + ABIE41_RS09150 0.57 -0.1
1,896,069 + ABIE41_RS09150 0.57 -0.0
1,896,069 + ABIE41_RS09150 0.57 -0.1
1,896,135 + ABIE41_RS09150 0.60 +0.7
1,896,135 + ABIE41_RS09150 0.60 +0.4
1,896,135 + ABIE41_RS09150 0.60 +1.4
1,896,136 - ABIE41_RS09150 0.60 -0.8
1,896,136 - ABIE41_RS09150 0.60 +1.0
1,896,324 + ABIE41_RS09150 0.70 -0.1
1,896,324 + ABIE41_RS09150 0.70 -0.6
1,896,324 + ABIE41_RS09150 0.70 +0.8
1,896,324 + ABIE41_RS09150 0.70 -0.6
1,896,325 - ABIE41_RS09150 0.70 -1.5
1,896,325 - ABIE41_RS09150 0.70 -1.5
1,896,397 + ABIE41_RS09150 0.74 -0.4
1,896,397 + ABIE41_RS09150 0.74 -0.0
1,896,416 - ABIE41_RS09150 0.75 +0.6
1,896,559 - ABIE41_RS09150 0.82 +1.8
1,896,559 - ABIE41_RS09150 0.82 +0.3
1,896,757 + +0.1
1,896,758 - -0.6
1,896,986 + +0.7
1,897,420 - ABIE41_RS09155 0.43 +0.3
1,897,428 + ABIE41_RS09155 0.44 -1.8
1,897,428 + ABIE41_RS09155 0.44 -0.1
1,897,429 - ABIE41_RS09155 0.44 +2.1
1,897,443 + ABIE41_RS09155 0.45 -1.0
1,897,465 + ABIE41_RS09155 0.48 -0.2
1,897,466 - ABIE41_RS09155 0.48 -0.0
1,897,466 - ABIE41_RS09155 0.48 +0.1
1,897,466 - ABIE41_RS09155 0.48 -0.2
1,897,467 + ABIE41_RS09155 0.48 -0.4
1,897,467 + ABIE41_RS09155 0.48 -0.5
1,897,467 + ABIE41_RS09155 0.48 -0.0
1,897,467 + ABIE41_RS09155 0.48 +0.6
1,897,467 + ABIE41_RS09155 0.48 -0.1
1,897,467 + ABIE41_RS09155 0.48 -0.1
1,897,467 + ABIE41_RS09155 0.48 -0.1
1,897,467 + ABIE41_RS09155 0.48 +0.7
1,897,468 - ABIE41_RS09155 0.48 -0.4
1,897,468 - ABIE41_RS09155 0.48 -0.0
1,897,642 + ABIE41_RS09155 0.68 -0.4
1,897,642 + ABIE41_RS09155 0.68 +0.5
1,897,643 - ABIE41_RS09155 0.68 +0.9
1,897,643 - ABIE41_RS09155 0.68 -0.2
1,897,643 - ABIE41_RS09155 0.68 -0.6
1,897,643 - ABIE41_RS09155 0.68 +0.8
1,897,643 - ABIE41_RS09155 0.68 -0.2
1,898,229 + ABIE41_RS09160 0.17 -0.9
1,898,229 + ABIE41_RS09160 0.17 -0.1
1,898,229 + ABIE41_RS09160 0.17 +1.1
1,898,229 + ABIE41_RS09160 0.17 -0.8
1,898,230 - ABIE41_RS09160 0.17 +0.5
1,898,230 - ABIE41_RS09160 0.17 +0.6
1,898,230 - ABIE41_RS09160 0.17 -0.6
1,898,230 - ABIE41_RS09160 0.17 +0.4
1,898,231 + ABIE41_RS09160 0.17 -0.1
1,898,231 + ABIE41_RS09160 0.17 +1.1
1,898,232 - ABIE41_RS09160 0.17 +2.0
1,898,232 - ABIE41_RS09160 0.17 +0.4
1,898,276 + ABIE41_RS09160 0.23 +0.5
1,898,304 + ABIE41_RS09160 0.27 +1.4
1,898,305 - ABIE41_RS09160 0.27 +0.7
1,898,305 - ABIE41_RS09160 0.27 +0.5
1,898,470 - ABIE41_RS09160 0.49 +0.1

Or see this region's nucleotide sequence