Strain Fitness in Bosea sp. OAE506 around ABIE41_RS06820

Experiment: DMSO control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	DMSO control
1,396,884	+		ABIE41_RS06810	0.50	-1.4
1,396,884	+		ABIE41_RS06810	0.50	+0.7
1,396,885	-		ABIE41_RS06810	0.50	+0.7
1,396,885	-		ABIE41_RS06810	0.50	-0.2
1,396,885	-		ABIE41_RS06810	0.50	-0.1
1,396,909	-		ABIE41_RS06810	0.52	+0.5
1,396,909	-		ABIE41_RS06810	0.52	-0.1
1,396,909	-		ABIE41_RS06810	0.52	-0.0
1,396,935	+		ABIE41_RS06810	0.53	-0.2
1,396,935	+		ABIE41_RS06810	0.53	-0.8
1,396,935	+		ABIE41_RS06810	0.53	-0.9
1,396,935	+		ABIE41_RS06810	0.53	-0.2
1,396,935	+		ABIE41_RS06810	0.53	+0.6
1,396,935	+		ABIE41_RS06810	0.53	-1.1
1,396,935	+		ABIE41_RS06810	0.53	+0.9
1,396,935	+		ABIE41_RS06810	0.53	-0.4
1,396,935	+		ABIE41_RS06810	0.53	+0.2
1,396,959	+		ABIE41_RS06810	0.55	+0.4
1,396,959	+		ABIE41_RS06810	0.55	-1.0
1,396,959	+		ABIE41_RS06810	0.55	+1.7
1,396,959	+		ABIE41_RS06810	0.55	-1.7
1,396,960	-		ABIE41_RS06810	0.55	+0.5
1,396,960	-		ABIE41_RS06810	0.55	-0.0
1,396,960	-		ABIE41_RS06810	0.55	-0.3
1,396,960	-		ABIE41_RS06810	0.55	+0.0
1,396,960	-		ABIE41_RS06810	0.55	-0.0
1,396,960	-		ABIE41_RS06810	0.55	-0.7
1,396,998	+		ABIE41_RS06810	0.58	-0.6
1,396,999	-		ABIE41_RS06810	0.58	-1.1
1,396,999	-		ABIE41_RS06810	0.58	-0.7
1,397,121	+		ABIE41_RS06810	0.66	-1.8
1,397,122	-		ABIE41_RS06810	0.66	-0.9
1,397,122	-		ABIE41_RS06810	0.66	+1.8
1,397,171	+		ABIE41_RS06810	0.70	-0.8
1,397,172	-		ABIE41_RS06810	0.70	+1.2
1,397,199	+		ABIE41_RS06810	0.71	-0.6
1,397,199	+		ABIE41_RS06810	0.71	+0.2
1,397,199	+		ABIE41_RS06810	0.71	-0.8
1,397,200	-		ABIE41_RS06810	0.72	+1.5
1,397,200	-		ABIE41_RS06810	0.72	+0.5
1,397,217	+		ABIE41_RS06810	0.73	-0.7
1,397,217	+		ABIE41_RS06810	0.73	-1.5
1,397,217	+		ABIE41_RS06810	0.73	-0.9
1,397,217	+		ABIE41_RS06810	0.73	-0.5
1,397,217	+		ABIE41_RS06810	0.73	-0.2
1,397,217	+		ABIE41_RS06810	0.73	-1.1
1,397,217	+		ABIE41_RS06810	0.73	-0.3
1,397,217	+		ABIE41_RS06810	0.73	-0.2
1,397,217	+		ABIE41_RS06810	0.73	-0.8
1,397,218	-		ABIE41_RS06810	0.73	-2.3
1,397,218	-		ABIE41_RS06810	0.73	-0.1
1,397,218	-		ABIE41_RS06810	0.73	+1.7
1,397,218	-		ABIE41_RS06810	0.73	-0.7
1,397,218	-		ABIE41_RS06810	0.73	+2.4
1,397,218	-		ABIE41_RS06810	0.73	-0.2
1,397,218	-		ABIE41_RS06810	0.73	+0.8
1,397,218	-		ABIE41_RS06810	0.73	+1.2
1,397,218	-		ABIE41_RS06810	0.73	-0.1
1,397,218	-		ABIE41_RS06810	0.73	+0.4
1,397,218	-		ABIE41_RS06810	0.73	-0.5
1,397,218	-		ABIE41_RS06810	0.73	+1.4
1,397,218	-		ABIE41_RS06810	0.73	+0.1
1,397,218	-		ABIE41_RS06810	0.73	+0.1
1,397,220	+		ABIE41_RS06810	0.73	-0.3
1,397,220	+		ABIE41_RS06810	0.73	-1.0
1,397,220	+		ABIE41_RS06810	0.73	-1.0
1,397,220	+		ABIE41_RS06810	0.73	+2.0
1,397,220	+		ABIE41_RS06810	0.73	-0.6
1,397,220	+		ABIE41_RS06810	0.73	+0.1
1,397,220	+		ABIE41_RS06810	0.73	+0.4
1,397,220	+		ABIE41_RS06810	0.73	-0.3
1,397,220	+		ABIE41_RS06810	0.73	-0.8
1,397,221	-		ABIE41_RS06810	0.73	-0.4
1,397,221	-		ABIE41_RS06810	0.73	+0.4
1,397,221	-		ABIE41_RS06810	0.73	-0.8
1,397,221	-		ABIE41_RS06810	0.73	+0.5
1,397,221	-		ABIE41_RS06810	0.73	-0.4
1,397,221	-		ABIE41_RS06810	0.73	-0.2
1,397,221	-		ABIE41_RS06810	0.73	+0.5
1,397,221	-		ABIE41_RS06810	0.73	+0.2
1,397,335	+		ABIE41_RS06810	0.81	-1.0
1,397,336	-		ABIE41_RS06810	0.81	+1.0
1,397,336	-		ABIE41_RS06810	0.81	-0.4
1,397,336	-		ABIE41_RS06810	0.81	-0.0
1,397,336	-		ABIE41_RS06810	0.81	-0.1
1,397,342	+		ABIE41_RS06810	0.81	-1.0
1,397,342	+		ABIE41_RS06810	0.81	-2.7
1,397,342	+		ABIE41_RS06810	0.81	-1.2
1,397,343	-		ABIE41_RS06810	0.81	+0.7
1,397,495	+				+0.8
1,397,495	+				-2.4
1,397,495	+				-0.9
1,397,495	+				-1.6
1,397,495	+				-2.3
1,397,495	+				-1.1
1,397,495	+				-1.3
1,397,495	+				-2.1
1,397,495	+				-1.7
1,397,495	+				-0.7
1,397,495	+				-1.7
1,397,495	+				-1.4
1,397,495	+				-1.4
1,397,495	+				-1.4
1,397,495	+				-0.8
1,397,495	+				-0.5
1,397,495	+				-1.2
1,397,495	+				-1.4
1,397,495	+				+0.3
1,397,495	+				-1.2
1,397,495	+				-1.9
1,397,495	+				-2.1
1,397,495	+				-0.1
1,397,495	+				-0.3
1,397,496	-				+0.2
1,397,496	-				-0.3
1,397,496	-				+1.0
1,397,496	-				-0.5
1,397,496	-				-0.0
1,397,496	-				+1.0
1,397,496	-				-0.3
1,397,496	-				-0.1
1,397,496	-				-0.4
1,397,496	-				+0.6
1,397,496	-				+0.7
1,397,496	-				+1.0
1,397,496	-				-0.1
1,397,496	-				+0.7
1,397,496	-				+0.1
1,397,496	-				-0.4
1,397,496	-				+0.6
1,397,499	+				-0.4
1,397,499	+				-1.5
1,397,500	-				-1.5
1,397,500	-				-1.2
1,397,500	-				+0.5
1,397,500	-				-0.0
1,397,586	+				-1.9
1,397,586	+				+0.4
1,397,586	+				-0.1
1,397,586	+				-2.9
1,397,586	+				+0.4
1,397,587	-				+0.9
1,397,587	-				+0.1
1,397,587	-				-1.4
1,397,587	-				+0.0
1,397,587	-				+0.2
1,397,605	+				+0.5
1,397,605	+				-1.0
1,397,606	-				+0.4
1,397,606	-				-1.0
1,397,820	-				+0.1
1,397,859	+				+0.0
1,397,859	+				+0.8
1,397,860	-				-0.4
1,397,860	-				-0.1
1,397,860	-				+0.1
1,397,860	-				+0.8
1,397,909	+				+0.4
1,397,910	-				+0.3
1,397,910	-				+0.4
1,397,915	-				+0.9
1,397,934	+				-0.0
1,397,934	+				-0.1
1,397,935	-				-0.4
1,397,935	-				-0.6
1,397,935	-				-0.1
1,397,935	-				-0.5
1,397,935	-				-0.3
1,398,089	+		ABIE41_RS06820	0.39	+0.1
1,398,089	+		ABIE41_RS06820	0.39	+0.3
1,398,090	-		ABIE41_RS06820	0.39	+1.6
1,398,141	+		ABIE41_RS06820	0.49	+0.1
1,398,141	+		ABIE41_RS06820	0.49	+1.8
1,398,141	+		ABIE41_RS06820	0.49	+0.0
1,398,141	+		ABIE41_RS06820	0.49	+0.4
1,398,141	+		ABIE41_RS06820	0.49	-1.9
1,398,141	+		ABIE41_RS06820	0.49	+2.0
1,398,141	+		ABIE41_RS06820	0.49	+0.5
1,398,141	+		ABIE41_RS06820	0.49	-0.8
1,398,141	+		ABIE41_RS06820	0.49	-0.3
1,398,141	+		ABIE41_RS06820	0.49	+0.4
1,398,141	+		ABIE41_RS06820	0.49	-0.7
1,398,141	+		ABIE41_RS06820	0.49	-0.2
1,398,141	+		ABIE41_RS06820	0.49	+0.1
1,398,141	+		ABIE41_RS06820	0.49	+0.0
1,398,141	+		ABIE41_RS06820	0.49	+1.2
1,398,142	-		ABIE41_RS06820	0.49	-0.1
1,398,142	-		ABIE41_RS06820	0.49	-1.7
1,398,142	-		ABIE41_RS06820	0.49	+0.2
1,398,142	-		ABIE41_RS06820	0.49	+1.3
1,398,142	-		ABIE41_RS06820	0.49	+0.3
1,398,142	-		ABIE41_RS06820	0.49	-0.6
1,398,142	-		ABIE41_RS06820	0.49	-0.2
1,398,142	-		ABIE41_RS06820	0.49	+0.3
1,398,142	-		ABIE41_RS06820	0.49	-1.3
1,398,142	-		ABIE41_RS06820	0.49	+0.7
1,398,142	-		ABIE41_RS06820	0.49	+0.2
1,398,142	-		ABIE41_RS06820	0.49	-2.1
1,398,142	-		ABIE41_RS06820	0.49	-0.3
1,398,246	+		ABIE41_RS06820	0.68	+0.0
1,398,246	+		ABIE41_RS06820	0.68	-0.6
1,398,328	+		ABIE41_RS06820	0.84	+0.6
1,398,329	-		ABIE41_RS06820	0.84	-0.2
1,398,447	+				-0.5
1,398,447	+				+2.0
1,398,447	+				+1.3
1,398,448	-				-0.2
1,398,533	+				+0.4
1,398,533	+				-0.1
1,398,533	+				+1.6
1,398,533	+				+0.6
1,398,533	+				-0.4
1,398,534	-				+0.1
1,398,685	+		ABIE41_RS06825	0.71	+0.8
1,398,685	+		ABIE41_RS06825	0.71	+0.4
1,398,685	+		ABIE41_RS06825	0.71	+2.5
1,398,686	-		ABIE41_RS06825	0.71	-0.5
1,398,686	-		ABIE41_RS06825	0.71	-1.0
1,398,686	-		ABIE41_RS06825	0.71	-0.4
1,398,718	-		ABIE41_RS06825	0.84	+0.2
1,398,789	+				+0.1
1,398,834	+				+0.4
1,398,834	+				-0.3
1,398,834	+				+0.5
1,398,834	+				+0.1
1,398,834	+				+0.0
1,398,835	-				-0.8
1,398,835	-				+0.7
1,398,835	-				+0.4
1,398,853	+				-0.0
1,398,853	+				-0.8
1,398,853	+				-0.0
1,398,853	+				+0.8
1,398,853	+				-0.0
1,398,853	+				+3.3
1,398,853	+				+0.6
1,398,853	+				+1.4
1,398,853	+				+0.7
1,398,853	+				+2.0
1,398,853	+				-0.2
1,398,854	-				-0.0
1,398,854	-				+2.4
1,398,854	-				+0.7
1,398,854	-				-0.8
1,398,854	-				+0.1
1,398,854	-				-0.9
1,398,854	-				-1.1
1,398,858	+				+0.2
1,398,940	+				-0.5
1,398,940	+				+0.2
1,398,941	-				+0.3
1,398,941	-				+2.0
1,398,941	-				-0.0
1,398,941	-				-0.9
1,398,941	-				-2.0
1,398,941	-				+0.4
1,398,941	-				-1.2
1,398,951	+				+0.4
1,398,951	+				-1.3
1,398,951	+				+0.4
1,398,951	+				-0.5
1,398,951	+				+2.4
1,398,952	-				+0.1
1,398,952	-				+0.0
1,398,952	-				+0.4
1,398,990	+				+0.5
1,398,991	-				-0.2
1,399,018	+				+0.1
1,399,018	+				+0.2
1,399,018	+				-1.3
1,399,018	+				+0.3
1,399,019	-				-0.4
1,399,019	-				+0.2
1,399,019	-				+2.3
1,399,022	+				-0.4
1,399,023	+				+0.2
1,399,023	+				-0.4
1,399,023	+				+0.6
1,399,024	-				+1.0
1,399,024	-				+0.8
1,399,024	-				+0.5
1,399,024	-				-0.9
1,399,024	-				+0.3
1,399,024	-				+1.0
1,399,133	+				-0.4
1,399,133	+				-2.1
1,399,133	+				-0.3
1,399,133	+				-1.8
1,399,133	+				-0.7
1,399,133	+				-1.1
1,399,133	+				-0.0
1,399,133	+				+0.1
1,399,133	+				-0.4
1,399,133	+				-0.0
1,399,133	+				-0.1
1,399,133	+				-1.8
1,399,133	+				+0.1
1,399,133	+				+0.7
1,399,134	-				+1.8
1,399,134	-				-1.5
1,399,134	-				+1.6
1,399,134	-				+1.6
1,399,134	-				-0.3
1,399,134	-				+1.0
1,399,134	-				-0.8
1,399,134	-				-1.1
1,399,134	-				-0.8
1,399,181	-				-0.8
1,399,333	+				-0.2
1,399,333	+				-0.4
1,399,333	+				+0.4
1,399,334	-				+0.8
1,399,334	-				-1.3
1,399,334	-				+0.7
1,399,334	-				+0.0
1,399,334	-				+1.4
1,399,352	+				+0.3
1,399,352	+				-0.0
1,399,366	+				+0.5
1,399,367	-				+0.1
1,399,414	+				+0.2
1,399,414	+				-0.1
1,399,414	+				+0.8
1,399,414	+				+1.5
1,399,414	+				+0.2
1,399,414	+				-0.4
1,399,415	-				-0.8
1,399,415	-				+0.4
1,399,415	-				-0.6
1,399,415	-				-0.8