Strain Fitness in Bosea sp. OAE506 around ABIE41_RS05240

Experiment: DMSO control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	DMSO control
1,083,095	+		ABIE41_RS05235	0.23	+1.2
1,083,344	-		ABIE41_RS05235	0.47	-0.4
1,083,501	-		ABIE41_RS05235	0.62	+1.0
1,083,501	-		ABIE41_RS05235	0.62	+0.2
1,083,501	-		ABIE41_RS05235	0.62	-0.3
1,083,501	-		ABIE41_RS05235	0.62	-0.1
1,083,501	-		ABIE41_RS05235	0.62	+1.0
1,083,537	-		ABIE41_RS05235	0.66	+0.1
1,083,537	-		ABIE41_RS05235	0.66	+0.5
1,083,537	-		ABIE41_RS05235	0.66	-0.9
1,083,537	-		ABIE41_RS05235	0.66	+2.1
1,083,587	+		ABIE41_RS05235	0.70	+0.9
1,083,587	+		ABIE41_RS05235	0.70	-0.4
1,083,587	+		ABIE41_RS05235	0.70	+1.5
1,083,981	+				-0.4
1,083,981	+				-0.8
1,083,986	+				-0.5
1,084,042	+				-1.3
1,084,128	-				+0.2
1,084,128	-				-0.6
1,084,128	-				+0.6
1,084,128	-				-0.4
1,084,223	+		ABIE41_RS05240	0.15	+0.0
1,084,223	+		ABIE41_RS05240	0.15	+0.5
1,084,223	+		ABIE41_RS05240	0.15	-1.0
1,084,224	-		ABIE41_RS05240	0.15	+0.7
1,084,224	-		ABIE41_RS05240	0.15	+0.5
1,084,224	-		ABIE41_RS05240	0.15	-0.0
1,084,224	-		ABIE41_RS05240	0.15	+0.3
1,084,317	-		ABIE41_RS05240	0.22	-0.3
1,084,337	+		ABIE41_RS05240	0.24	+0.4
1,084,337	+		ABIE41_RS05240	0.24	+0.7
1,084,338	-		ABIE41_RS05240	0.24	+0.1
1,084,338	-		ABIE41_RS05240	0.24	+2.1
1,084,338	-		ABIE41_RS05240	0.24	+0.9
1,084,811	+		ABIE41_RS05240	0.61	-1.0
1,084,811	+		ABIE41_RS05240	0.61	-0.2
1,084,811	+		ABIE41_RS05240	0.61	-0.6
1,084,811	+		ABIE41_RS05240	0.61	+0.5
1,084,811	+		ABIE41_RS05240	0.61	+0.2
1,084,811	+		ABIE41_RS05240	0.61	-0.3
1,084,811	+		ABIE41_RS05240	0.61	-0.5
1,084,811	+		ABIE41_RS05240	0.61	+0.5
1,084,811	+		ABIE41_RS05240	0.61	+1.5
1,084,811	+		ABIE41_RS05240	0.61	+0.2
1,084,811	+		ABIE41_RS05240	0.61	+0.3
1,084,811	+		ABIE41_RS05240	0.61	+0.7
1,084,811	+		ABIE41_RS05240	0.61	+0.9
1,084,811	+		ABIE41_RS05240	0.61	-0.4
1,084,811	+		ABIE41_RS05240	0.61	-1.8
1,084,811	+		ABIE41_RS05240	0.61	+1.1
1,084,811	+		ABIE41_RS05240	0.61	+0.5
1,084,811	+		ABIE41_RS05240	0.61	-1.0
1,084,812	-		ABIE41_RS05240	0.61	-0.3
1,084,812	-		ABIE41_RS05240	0.61	+0.4
1,084,812	-		ABIE41_RS05240	0.61	+0.5
1,084,812	-		ABIE41_RS05240	0.61	+1.2
1,084,812	-		ABIE41_RS05240	0.61	-1.6
1,084,812	-		ABIE41_RS05240	0.61	+1.0
1,084,812	-		ABIE41_RS05240	0.61	+0.2
1,084,812	-		ABIE41_RS05240	0.61	+0.3
1,084,812	-		ABIE41_RS05240	0.61	+0.7
1,084,812	-		ABIE41_RS05240	0.61	-0.3
1,084,812	-		ABIE41_RS05240	0.61	+0.5
1,084,812	-		ABIE41_RS05240	0.61	+0.3
1,084,812	-		ABIE41_RS05240	0.61	-0.4
1,084,812	-		ABIE41_RS05240	0.61	+0.1
1,084,812	-		ABIE41_RS05240	0.61	-1.1
1,084,812	-		ABIE41_RS05240	0.61	+0.6
1,084,812	-		ABIE41_RS05240	0.61	-0.2
1,084,988	+		ABIE41_RS05240	0.75	-1.0
1,084,988	+		ABIE41_RS05240	0.75	+1.2
1,084,989	-		ABIE41_RS05240	0.75	-0.4
1,084,989	-		ABIE41_RS05240	0.75	+0.1
1,084,989	-		ABIE41_RS05240	0.75	+0.1
1,085,021	+		ABIE41_RS05240	0.77	-0.0
1,085,021	+		ABIE41_RS05240	0.77	-0.5
1,085,021	+		ABIE41_RS05240	0.77	-1.4
1,085,021	+		ABIE41_RS05240	0.77	+0.0
1,085,022	-		ABIE41_RS05240	0.77	+2.1
1,085,078	+		ABIE41_RS05240	0.82	+0.5
1,085,078	+		ABIE41_RS05240	0.82	-0.1
1,085,079	-		ABIE41_RS05240	0.82	-0.7
1,085,156	+		ABIE41_RS05240	0.88	-0.1
1,085,156	+		ABIE41_RS05240	0.88	-1.9
1,085,156	+		ABIE41_RS05240	0.88	-0.1
1,085,157	-		ABIE41_RS05240	0.88	+1.6
1,085,157	-		ABIE41_RS05240	0.88	+0.0
1,085,172	-		ABIE41_RS05240	0.89	+0.6
1,085,172	-		ABIE41_RS05240	0.89	-0.4
1,085,172	-		ABIE41_RS05240	0.89	-0.3
1,085,255	+				+2.1
1,085,256	-				+0.2
1,085,256	-				+0.2
1,085,309	+				-1.1
1,085,382	+				+0.5
1,085,382	+				-0.3
1,085,382	+				-0.1
1,085,383	-				-0.9
1,085,450	+		ABIE41_RS05245	0.13	-0.7
1,085,450	+		ABIE41_RS05245	0.13	+0.4
1,085,450	+		ABIE41_RS05245	0.13	+0.1
1,085,450	+		ABIE41_RS05245	0.13	-0.2
1,085,450	+		ABIE41_RS05245	0.13	-0.3
1,085,450	+		ABIE41_RS05245	0.13	+0.2
1,085,450	+		ABIE41_RS05245	0.13	-1.3
1,085,450	+		ABIE41_RS05245	0.13	+0.1
1,085,451	-		ABIE41_RS05245	0.13	-0.1
1,085,451	-		ABIE41_RS05245	0.13	-0.1
1,085,451	-		ABIE41_RS05245	0.13	-0.4
1,085,451	-		ABIE41_RS05245	0.13	+0.3
1,085,451	-		ABIE41_RS05245	0.13	-0.2
1,085,451	-		ABIE41_RS05245	0.13	-0.6
1,085,451	-		ABIE41_RS05245	0.13	+0.2
1,085,585	+		ABIE41_RS05245	0.26	+2.1
1,085,585	+		ABIE41_RS05245	0.26	-1.9
1,085,585	+		ABIE41_RS05245	0.26	+0.4
1,085,585	+		ABIE41_RS05245	0.26	-0.6
1,085,585	+		ABIE41_RS05245	0.26	-0.4
1,085,585	+		ABIE41_RS05245	0.26	+0.6
1,085,591	+		ABIE41_RS05245	0.27	+2.2
1,085,591	+		ABIE41_RS05245	0.27	+0.5
1,085,591	+		ABIE41_RS05245	0.27	+0.1
1,085,591	+		ABIE41_RS05245	0.27	-1.0
1,085,591	+		ABIE41_RS05245	0.27	+0.5
1,085,591	+		ABIE41_RS05245	0.27	-0.4
1,085,591	+		ABIE41_RS05245	0.27	-0.3
1,085,592	-		ABIE41_RS05245	0.27	-0.4
1,085,592	-		ABIE41_RS05245	0.27	+1.1
1,085,774	+		ABIE41_RS05245	0.45	+0.2
1,085,774	+		ABIE41_RS05245	0.45	+0.4
1,085,774	+		ABIE41_RS05245	0.45	-0.4
1,085,775	-		ABIE41_RS05245	0.45	-0.5
1,085,775	-		ABIE41_RS05245	0.45	-0.1
1,085,950	+		ABIE41_RS05245	0.62	+0.3
1,085,950	+		ABIE41_RS05245	0.62	+0.1
1,085,951	-		ABIE41_RS05245	0.62	-1.0
1,085,951	-		ABIE41_RS05245	0.62	-0.1
1,085,951	-		ABIE41_RS05245	0.62	+0.1
1,085,960	+		ABIE41_RS05245	0.63	+0.5
1,085,960	+		ABIE41_RS05245	0.63	+0.2
1,085,960	+		ABIE41_RS05245	0.63	+1.9
1,085,960	+		ABIE41_RS05245	0.63	-0.4
1,085,961	-		ABIE41_RS05245	0.63	+0.1
1,085,961	-		ABIE41_RS05245	0.63	+0.1
1,085,961	-		ABIE41_RS05245	0.63	+0.2
1,085,961	-		ABIE41_RS05245	0.63	-0.2
1,085,961	-		ABIE41_RS05245	0.63	+0.1
1,086,008	+		ABIE41_RS05245	0.68	-0.2
1,086,061	+		ABIE41_RS05245	0.73	+0.3
1,086,061	+		ABIE41_RS05245	0.73	+0.9
1,086,062	-		ABIE41_RS05245	0.73	+0.2
1,086,062	-		ABIE41_RS05245	0.73	-0.2
1,086,062	-		ABIE41_RS05245	0.73	-1.3
1,086,085	+		ABIE41_RS05245	0.76	-0.3
1,086,085	+		ABIE41_RS05245	0.76	-0.2
1,086,086	-		ABIE41_RS05245	0.76	-0.4
1,086,086	-		ABIE41_RS05245	0.76	+1.1
1,086,086	-		ABIE41_RS05245	0.76	+1.1
1,086,086	-		ABIE41_RS05245	0.76	-0.1
1,086,194	+		ABIE41_RS05245	0.86	+1.2
1,086,194	+		ABIE41_RS05245	0.86	+0.2
1,086,194	+		ABIE41_RS05245	0.86	-1.4
1,086,194	+		ABIE41_RS05245	0.86	-0.7
1,086,194	+		ABIE41_RS05245	0.86	+0.7
1,086,195	-		ABIE41_RS05245	0.86	-0.8
1,086,195	-		ABIE41_RS05245	0.86	+0.4
1,086,195	-		ABIE41_RS05245	0.86	+0.3
1,086,195	-		ABIE41_RS05245	0.86	-1.1
1,086,200	+		ABIE41_RS05245	0.87	-0.1
1,086,200	+		ABIE41_RS05245	0.87	-0.2
1,086,200	+		ABIE41_RS05245	0.87	-0.6
1,086,200	+		ABIE41_RS05245	0.87	+1.5
1,086,201	-		ABIE41_RS05245	0.87	-0.8
1,086,201	-		ABIE41_RS05245	0.87	-0.0