Experiment: DMSO control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS04840 and ABIE41_RS04845 are separated by 55 nucleotides ABIE41_RS04845 and ABIE41_RS04850 are separated by 71 nucleotides ABIE41_RS04850 and ABIE41_RS04855 overlap by 4 nucleotides
ABIE41_RS04840: ABIE41_RS04840 - signal recognition particle-docking protein FtsY, at 1,010,874 to 1,012,070
_RS04840
ABIE41_RS04845: ABIE41_RS04845 - septation protein A, at 1,012,126 to 1,012,743
_RS04845
ABIE41_RS04850: ABIE41_RS04850 - MbcA/ParS/Xre antitoxin family protein, at 1,012,815 to 1,013,225
_RS04850
ABIE41_RS04855: ABIE41_RS04855 - RES family NAD+ phosphorylase, at 1,013,222 to 1,013,959
_RS04855
Position (kb)
1012
1013 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1012.226 kb on - strand, within ABIE41_RS04845 at 1012.336 kb on + strand, within ABIE41_RS04845 at 1012.336 kb on + strand, within ABIE41_RS04845 at 1012.337 kb on - strand, within ABIE41_RS04845 at 1012.337 kb on - strand, within ABIE41_RS04845 at 1012.481 kb on - strand, within ABIE41_RS04845 at 1012.481 kb on - strand, within ABIE41_RS04845 at 1012.741 kb on + strand at 1012.768 kb on + strand at 1012.842 kb on - strand at 1012.842 kb on - strand at 1012.842 kb on - strand at 1012.979 kb on - strand, within ABIE41_RS04850 at 1013.097 kb on + strand, within ABIE41_RS04850 at 1013.098 kb on - strand, within ABIE41_RS04850 at 1013.098 kb on - strand, within ABIE41_RS04850 at 1013.197 kb on - strand at 1013.525 kb on + strand, within ABIE41_RS04855 at 1013.525 kb on + strand, within ABIE41_RS04855 at 1013.714 kb on + strand, within ABIE41_RS04855 at 1013.715 kb on - strand, within ABIE41_RS04855 at 1013.715 kb on - strand, within ABIE41_RS04855 at 1013.715 kb on - strand, within ABIE41_RS04855 at 1013.715 kb on - strand, within ABIE41_RS04855 at 1013.715 kb on - strand, within ABIE41_RS04855
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO control remove 1,012,226 - ABIE41_RS04845 0.16 -1.5 1,012,336 + ABIE41_RS04845 0.34 -2.1 1,012,336 + ABIE41_RS04845 0.34 -1.0 1,012,337 - ABIE41_RS04845 0.34 -1.6 1,012,337 - ABIE41_RS04845 0.34 -2.6 1,012,481 - ABIE41_RS04845 0.57 -4.3 1,012,481 - ABIE41_RS04845 0.57 -2.3 1,012,741 + +0.9 1,012,768 + -0.0 1,012,842 - -0.1 1,012,842 - -0.5 1,012,842 - -0.5 1,012,979 - ABIE41_RS04850 0.40 -0.2 1,013,097 + ABIE41_RS04850 0.69 -0.7 1,013,098 - ABIE41_RS04850 0.69 -0.1 1,013,098 - ABIE41_RS04850 0.69 -0.3 1,013,197 - +0.5 1,013,525 + ABIE41_RS04855 0.41 -0.2 1,013,525 + ABIE41_RS04855 0.41 +0.0 1,013,714 + ABIE41_RS04855 0.67 -0.3 1,013,715 - ABIE41_RS04855 0.67 -0.5 1,013,715 - ABIE41_RS04855 0.67 +0.1 1,013,715 - ABIE41_RS04855 0.67 +0.8 1,013,715 - ABIE41_RS04855 0.67 -0.4 1,013,715 - ABIE41_RS04855 0.67 -0.4
Or see this region's nucleotide sequence