Experiment: DMSO control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS00475 and ABIE41_RS00480 are separated by 8 nucleotides ABIE41_RS00480 and ABIE41_RS00485 overlap by 61 nucleotides ABIE41_RS00485 and ABIE41_RS00490 are separated by 28 nucleotides ABIE41_RS00490 and ABIE41_RS00495 are separated by 151 nucleotides ABIE41_RS00495 and ABIE41_RS00500 are separated by 60 nucleotides
ABIE41_RS00475: ABIE41_RS00475 - SAVED domain-containing protein, at 84,563 to 85,243
_RS00475
ABIE41_RS00480: ABIE41_RS00480 - ATP-binding protein, at 85,252 to 85,830
_RS00480
ABIE41_RS00485: ABIE41_RS00485 - response regulator, at 85,770 to 86,198
_RS00485
ABIE41_RS00490: ABIE41_RS00490 - PAS domain-containing protein, at 86,227 to 87,321
_RS00490
ABIE41_RS00495: ABIE41_RS00495 - transposase, at 87,473 to 87,685
_RS00495
ABIE41_RS00500: ABIE41_RS00500 - response regulator, at 87,746 to 89,423
_RS00500
Position (kb) 86
87
88 Strain fitness (log2 ratio) -2
-1
0
1
2 at 85.271 kb on - strand at 85.377 kb on - strand, within ABIE41_RS00480 at 85.398 kb on + strand, within ABIE41_RS00480 at 85.399 kb on - strand, within ABIE41_RS00480 at 85.399 kb on - strand, within ABIE41_RS00480 at 85.431 kb on + strand, within ABIE41_RS00480 at 85.432 kb on - strand, within ABIE41_RS00480 at 85.432 kb on - strand, within ABIE41_RS00480 at 85.479 kb on + strand, within ABIE41_RS00480 at 85.479 kb on + strand, within ABIE41_RS00480 at 85.479 kb on + strand, within ABIE41_RS00480 at 85.479 kb on + strand, within ABIE41_RS00480 at 85.479 kb on + strand, within ABIE41_RS00480 at 85.479 kb on + strand, within ABIE41_RS00480 at 85.479 kb on + strand, within ABIE41_RS00480 at 85.480 kb on - strand, within ABIE41_RS00480 at 85.480 kb on - strand, within ABIE41_RS00480 at 85.480 kb on - strand, within ABIE41_RS00480 at 85.480 kb on - strand, within ABIE41_RS00480 at 85.480 kb on - strand, within ABIE41_RS00480 at 85.480 kb on - strand, within ABIE41_RS00480 at 85.586 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.589 kb on - strand, within ABIE41_RS00480 at 85.589 kb on - strand, within ABIE41_RS00480 at 85.589 kb on - strand, within ABIE41_RS00480 at 85.593 kb on + strand, within ABIE41_RS00480 at 85.593 kb on + strand, within ABIE41_RS00480 at 85.593 kb on + strand, within ABIE41_RS00480 at 85.594 kb on - strand, within ABIE41_RS00480 at 85.594 kb on - strand, within ABIE41_RS00480 at 85.594 kb on - strand, within ABIE41_RS00480 at 85.594 kb on - strand, within ABIE41_RS00480 at 85.594 kb on - strand, within ABIE41_RS00480 at 85.661 kb on + strand, within ABIE41_RS00480 at 85.661 kb on + strand, within ABIE41_RS00480 at 85.661 kb on + strand, within ABIE41_RS00480 at 85.661 kb on + strand, within ABIE41_RS00480 at 85.661 kb on + strand, within ABIE41_RS00480 at 85.661 kb on + strand, within ABIE41_RS00480 at 85.662 kb on - strand, within ABIE41_RS00480 at 85.662 kb on - strand, within ABIE41_RS00480 at 85.867 kb on + strand, within ABIE41_RS00485 at 85.867 kb on + strand, within ABIE41_RS00485 at 85.867 kb on + strand, within ABIE41_RS00485 at 85.868 kb on - strand, within ABIE41_RS00485 at 85.868 kb on - strand, within ABIE41_RS00485 at 85.868 kb on - strand, within ABIE41_RS00485 at 85.868 kb on - strand, within ABIE41_RS00485 at 85.969 kb on + strand, within ABIE41_RS00485 at 85.969 kb on + strand, within ABIE41_RS00485 at 85.969 kb on + strand, within ABIE41_RS00485 at 85.970 kb on - strand, within ABIE41_RS00485 at 85.970 kb on - strand, within ABIE41_RS00485 at 86.228 kb on + strand at 86.228 kb on + strand at 86.228 kb on + strand at 86.228 kb on + strand at 86.228 kb on + strand at 86.228 kb on + strand at 86.228 kb on + strand at 86.228 kb on + strand at 86.229 kb on - strand at 86.229 kb on - strand at 86.229 kb on - strand at 86.229 kb on - strand at 86.229 kb on - strand at 86.292 kb on + strand at 86.293 kb on - strand at 86.391 kb on + strand, within ABIE41_RS00490 at 86.391 kb on + strand, within ABIE41_RS00490 at 86.391 kb on + strand, within ABIE41_RS00490 at 86.392 kb on - strand, within ABIE41_RS00490 at 86.392 kb on - strand, within ABIE41_RS00490 at 86.393 kb on + strand, within ABIE41_RS00490 at 86.393 kb on + strand, within ABIE41_RS00490 at 86.393 kb on + strand, within ABIE41_RS00490 at 86.393 kb on + strand, within ABIE41_RS00490 at 86.393 kb on + strand, within ABIE41_RS00490 at 86.393 kb on + strand, within ABIE41_RS00490 at 86.393 kb on + strand, within ABIE41_RS00490 at 86.394 kb on - strand, within ABIE41_RS00490 at 86.394 kb on - strand, within ABIE41_RS00490 at 86.394 kb on - strand, within ABIE41_RS00490 at 86.394 kb on - strand, within ABIE41_RS00490 at 86.394 kb on - strand, within ABIE41_RS00490 at 86.394 kb on - strand, within ABIE41_RS00490 at 86.394 kb on - strand, within ABIE41_RS00490 at 86.981 kb on + strand, within ABIE41_RS00490 at 86.981 kb on + strand, within ABIE41_RS00490 at 86.981 kb on + strand, within ABIE41_RS00490 at 87.017 kb on + strand, within ABIE41_RS00490 at 87.017 kb on + strand, within ABIE41_RS00490 at 87.018 kb on - strand, within ABIE41_RS00490 at 87.316 kb on + strand at 87.428 kb on + strand at 87.428 kb on + strand at 87.428 kb on + strand at 87.430 kb on - strand at 87.445 kb on - strand at 87.500 kb on + strand, within ABIE41_RS00495 at 87.501 kb on - strand, within ABIE41_RS00495 at 87.501 kb on - strand, within ABIE41_RS00495 at 87.539 kb on + strand, within ABIE41_RS00495 at 87.539 kb on + strand, within ABIE41_RS00495 at 87.539 kb on + strand, within ABIE41_RS00495 at 87.539 kb on + strand, within ABIE41_RS00495 at 87.539 kb on + strand, within ABIE41_RS00495 at 87.540 kb on - strand, within ABIE41_RS00495 at 87.540 kb on - strand, within ABIE41_RS00495 at 87.540 kb on - strand, within ABIE41_RS00495 at 87.540 kb on - strand, within ABIE41_RS00495 at 87.540 kb on - strand, within ABIE41_RS00495 at 87.540 kb on - strand, within ABIE41_RS00495 at 87.588 kb on + strand, within ABIE41_RS00495 at 87.589 kb on - strand, within ABIE41_RS00495 at 87.589 kb on - strand, within ABIE41_RS00495 at 87.589 kb on - strand, within ABIE41_RS00495 at 87.602 kb on + strand, within ABIE41_RS00495 at 87.602 kb on + strand, within ABIE41_RS00495 at 87.602 kb on + strand, within ABIE41_RS00495 at 87.714 kb on + strand at 87.715 kb on - strand at 87.727 kb on + strand at 87.727 kb on + strand at 87.727 kb on + strand at 87.728 kb on - strand at 87.728 kb on - strand at 87.728 kb on - strand at 87.728 kb on - strand at 87.821 kb on + strand at 87.821 kb on + strand at 87.821 kb on + strand at 87.821 kb on + strand at 87.822 kb on - strand at 87.822 kb on - strand at 87.822 kb on - strand at 87.858 kb on + strand at 87.859 kb on - strand at 88.021 kb on + strand, within ABIE41_RS00500 at 88.021 kb on + strand, within ABIE41_RS00500 at 88.022 kb on - strand, within ABIE41_RS00500 at 88.022 kb on - strand, within ABIE41_RS00500 at 88.094 kb on + strand, within ABIE41_RS00500 at 88.095 kb on - strand, within ABIE41_RS00500 at 88.095 kb on - strand, within ABIE41_RS00500 at 88.095 kb on - strand, within ABIE41_RS00500
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO control remove 85,271 - -0.5 85,377 - ABIE41_RS00480 0.22 -2.3 85,398 + ABIE41_RS00480 0.25 +0.2 85,399 - ABIE41_RS00480 0.25 -1.5 85,399 - ABIE41_RS00480 0.25 -0.0 85,431 + ABIE41_RS00480 0.31 -0.9 85,432 - ABIE41_RS00480 0.31 +0.0 85,432 - ABIE41_RS00480 0.31 +2.3 85,479 + ABIE41_RS00480 0.39 +0.3 85,479 + ABIE41_RS00480 0.39 -0.1 85,479 + ABIE41_RS00480 0.39 +1.7 85,479 + ABIE41_RS00480 0.39 -0.1 85,479 + ABIE41_RS00480 0.39 +1.0 85,479 + ABIE41_RS00480 0.39 +2.5 85,479 + ABIE41_RS00480 0.39 +0.9 85,480 - ABIE41_RS00480 0.39 +0.5 85,480 - ABIE41_RS00480 0.39 -0.3 85,480 - ABIE41_RS00480 0.39 +0.3 85,480 - ABIE41_RS00480 0.39 -0.3 85,480 - ABIE41_RS00480 0.39 -0.2 85,480 - ABIE41_RS00480 0.39 +0.0 85,586 + ABIE41_RS00480 0.58 +0.2 85,588 + ABIE41_RS00480 0.58 -0.5 85,588 + ABIE41_RS00480 0.58 +0.6 85,588 + ABIE41_RS00480 0.58 +0.3 85,588 + ABIE41_RS00480 0.58 -0.6 85,588 + ABIE41_RS00480 0.58 -0.1 85,588 + ABIE41_RS00480 0.58 +0.3 85,588 + ABIE41_RS00480 0.58 +0.4 85,588 + ABIE41_RS00480 0.58 -1.0 85,588 + ABIE41_RS00480 0.58 +0.2 85,588 + ABIE41_RS00480 0.58 -0.2 85,588 + ABIE41_RS00480 0.58 +0.1 85,589 - ABIE41_RS00480 0.58 -0.6 85,589 - ABIE41_RS00480 0.58 -0.0 85,589 - ABIE41_RS00480 0.58 -1.5 85,593 + ABIE41_RS00480 0.59 -0.4 85,593 + ABIE41_RS00480 0.59 +0.6 85,593 + ABIE41_RS00480 0.59 -0.1 85,594 - ABIE41_RS00480 0.59 -0.8 85,594 - ABIE41_RS00480 0.59 -0.6 85,594 - ABIE41_RS00480 0.59 -0.6 85,594 - ABIE41_RS00480 0.59 -0.9 85,594 - ABIE41_RS00480 0.59 +0.0 85,661 + ABIE41_RS00480 0.71 +0.5 85,661 + ABIE41_RS00480 0.71 -1.7 85,661 + ABIE41_RS00480 0.71 -0.1 85,661 + ABIE41_RS00480 0.71 +0.9 85,661 + ABIE41_RS00480 0.71 +0.3 85,661 + ABIE41_RS00480 0.71 -0.5 85,662 - ABIE41_RS00480 0.71 +0.0 85,662 - ABIE41_RS00480 0.71 +0.3 85,867 + ABIE41_RS00485 0.23 -0.4 85,867 + ABIE41_RS00485 0.23 +1.4 85,867 + ABIE41_RS00485 0.23 +1.2 85,868 - ABIE41_RS00485 0.23 +0.4 85,868 - ABIE41_RS00485 0.23 +0.8 85,868 - ABIE41_RS00485 0.23 -0.6 85,868 - ABIE41_RS00485 0.23 +0.6 85,969 + ABIE41_RS00485 0.46 +1.8 85,969 + ABIE41_RS00485 0.46 +0.6 85,969 + ABIE41_RS00485 0.46 +0.3 85,970 - ABIE41_RS00485 0.47 +0.2 85,970 - ABIE41_RS00485 0.47 +2.0 86,228 + +0.0 86,228 + -0.6 86,228 + +1.6 86,228 + -0.7 86,228 + +0.1 86,228 + -0.6 86,228 + -0.0 86,228 + -0.2 86,229 - -1.1 86,229 - +0.1 86,229 - +0.3 86,229 - +0.8 86,229 - +0.8 86,292 + +0.3 86,293 - +0.1 86,391 + ABIE41_RS00490 0.15 -0.7 86,391 + ABIE41_RS00490 0.15 -0.4 86,391 + ABIE41_RS00490 0.15 +0.1 86,392 - ABIE41_RS00490 0.15 -0.1 86,392 - ABIE41_RS00490 0.15 +0.3 86,393 + ABIE41_RS00490 0.15 -0.3 86,393 + ABIE41_RS00490 0.15 -0.6 86,393 + ABIE41_RS00490 0.15 -0.2 86,393 + ABIE41_RS00490 0.15 -0.3 86,393 + ABIE41_RS00490 0.15 -0.8 86,393 + ABIE41_RS00490 0.15 +0.6 86,393 + ABIE41_RS00490 0.15 -0.9 86,394 - ABIE41_RS00490 0.15 -0.1 86,394 - ABIE41_RS00490 0.15 +0.4 86,394 - ABIE41_RS00490 0.15 -0.0 86,394 - ABIE41_RS00490 0.15 +1.2 86,394 - ABIE41_RS00490 0.15 -1.5 86,394 - ABIE41_RS00490 0.15 +0.7 86,394 - ABIE41_RS00490 0.15 -1.4 86,981 + ABIE41_RS00490 0.69 +0.6 86,981 + ABIE41_RS00490 0.69 +0.1 86,981 + ABIE41_RS00490 0.69 -0.3 87,017 + ABIE41_RS00490 0.72 -0.3 87,017 + ABIE41_RS00490 0.72 -0.1 87,018 - ABIE41_RS00490 0.72 -0.3 87,316 + -0.0 87,428 + +1.0 87,428 + -2.2 87,428 + +0.2 87,430 - -0.6 87,445 - -0.1 87,500 + ABIE41_RS00495 0.13 +0.3 87,501 - ABIE41_RS00495 0.13 -0.3 87,501 - ABIE41_RS00495 0.13 -0.1 87,539 + ABIE41_RS00495 0.31 +0.8 87,539 + ABIE41_RS00495 0.31 +0.1 87,539 + ABIE41_RS00495 0.31 -1.0 87,539 + ABIE41_RS00495 0.31 -2.3 87,539 + ABIE41_RS00495 0.31 -1.8 87,540 - ABIE41_RS00495 0.31 -0.6 87,540 - ABIE41_RS00495 0.31 -0.9 87,540 - ABIE41_RS00495 0.31 +0.9 87,540 - ABIE41_RS00495 0.31 -0.3 87,540 - ABIE41_RS00495 0.31 -0.8 87,540 - ABIE41_RS00495 0.31 -0.1 87,588 + ABIE41_RS00495 0.54 -0.9 87,589 - ABIE41_RS00495 0.54 +0.7 87,589 - ABIE41_RS00495 0.54 -0.8 87,589 - ABIE41_RS00495 0.54 -0.1 87,602 + ABIE41_RS00495 0.61 +0.5 87,602 + ABIE41_RS00495 0.61 +0.4 87,602 + ABIE41_RS00495 0.61 -1.2 87,714 + +0.5 87,715 - +0.1 87,727 + -1.3 87,727 + +0.4 87,727 + +0.6 87,728 - -0.2 87,728 - -1.7 87,728 - +1.7 87,728 - +0.3 87,821 + -0.2 87,821 + -0.3 87,821 + +0.3 87,821 + +0.4 87,822 - +0.4 87,822 - +1.0 87,822 - +0.4 87,858 + -0.8 87,859 - -0.0 88,021 + ABIE41_RS00500 0.16 +0.1 88,021 + ABIE41_RS00500 0.16 +0.6 88,022 - ABIE41_RS00500 0.16 +0.6 88,022 - ABIE41_RS00500 0.16 +2.2 88,094 + ABIE41_RS00500 0.21 -0.4 88,095 - ABIE41_RS00500 0.21 -0.8 88,095 - ABIE41_RS00500 0.21 +1.1 88,095 - ABIE41_RS00500 0.21 +0.1
Or see this region's nucleotide sequence