Strain Fitness in Bosea sp. OAE506 around ABIE41_RS20820

Experiment: DMSO control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS20815 and ABIE41_RS20820 are separated by 334 nucleotidesABIE41_RS20820 and ABIE41_RS20825 are separated by 9 nucleotides ABIE41_RS20815: ABIE41_RS20815 - Maf-like protein, at 4,279,751 to 4,280,359 _RS20815 ABIE41_RS20820: ABIE41_RS20820 - hypothetical protein, at 4,280,694 to 4,281,083 _RS20820 ABIE41_RS20825: ABIE41_RS20825 - phosphatidylcholine/phosphatidylserine synthase, at 4,281,093 to 4,281,941 _RS20825 Position (kb) 4280 4281 4282Strain fitness (log2 ratio) -1 0 1at 4280.771 kb on + strand, within ABIE41_RS20820at 4280.771 kb on + strand, within ABIE41_RS20820at 4281.931 kb on - strandat 4281.931 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction DMSO control
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4,280,771 + ABIE41_RS20820 0.20 -0.4
4,280,771 + ABIE41_RS20820 0.20 -0.5
4,281,931 - -0.1
4,281,931 - +0.3

Or see this region's nucleotide sequence