Strain Fitness in Bosea sp. OAE506 around ABIE41_RS07205

Experiment: DMSO control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS07195 and ABIE41_RS07200 overlap by 4 nucleotidesABIE41_RS07200 and ABIE41_RS07205 overlap by 4 nucleotidesABIE41_RS07205 and ABIE41_RS07210 are separated by 32 nucleotides ABIE41_RS07195: ABIE41_RS07195 - hypothetical protein, at 1,480,025 to 1,480,318 _RS07195 ABIE41_RS07200: ABIE41_RS07200 - polysaccharide deacetylase, at 1,480,315 to 1,481,151 _RS07200 ABIE41_RS07205: ABIE41_RS07205 - glycosyltransferase family 4 protein, at 1,481,148 to 1,482,290 _RS07205 ABIE41_RS07210: ABIE41_RS07210 - ABC transporter permease, at 1,482,323 to 1,483,414 _RS07210 Position (kb) 1481 1482 1483Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 1480.476 kb on + strand, within ABIE41_RS07200at 1480.477 kb on - strand, within ABIE41_RS07200at 1481.389 kb on - strand, within ABIE41_RS07205at 1481.455 kb on + strand, within ABIE41_RS07205at 1481.455 kb on + strand, within ABIE41_RS07205at 1481.455 kb on + strand, within ABIE41_RS07205at 1481.455 kb on + strand, within ABIE41_RS07205at 1481.456 kb on - strand, within ABIE41_RS07205at 1481.456 kb on - strand, within ABIE41_RS07205at 1481.456 kb on - strand, within ABIE41_RS07205at 1481.456 kb on - strand, within ABIE41_RS07205at 1481.467 kb on + strand, within ABIE41_RS07205at 1481.467 kb on + strand, within ABIE41_RS07205at 1481.468 kb on - strand, within ABIE41_RS07205at 1481.468 kb on - strand, within ABIE41_RS07205at 1481.468 kb on - strand, within ABIE41_RS07205at 1481.680 kb on + strand, within ABIE41_RS07205at 1481.680 kb on + strand, within ABIE41_RS07205at 1481.680 kb on + strand, within ABIE41_RS07205at 1481.680 kb on + strand, within ABIE41_RS07205at 1481.681 kb on - strand, within ABIE41_RS07205at 1481.681 kb on - strand, within ABIE41_RS07205at 1481.681 kb on - strand, within ABIE41_RS07205at 1481.681 kb on - strand, within ABIE41_RS07205at 1481.681 kb on - strand, within ABIE41_RS07205at 1481.735 kb on + strand, within ABIE41_RS07205at 1481.735 kb on + strand, within ABIE41_RS07205at 1481.735 kb on + strand, within ABIE41_RS07205at 1481.735 kb on + strand, within ABIE41_RS07205at 1481.735 kb on + strand, within ABIE41_RS07205at 1481.735 kb on + strand, within ABIE41_RS07205at 1481.735 kb on + strand, within ABIE41_RS07205at 1481.736 kb on - strand, within ABIE41_RS07205at 1481.736 kb on - strand, within ABIE41_RS07205at 1481.736 kb on - strand, within ABIE41_RS07205at 1481.736 kb on - strand, within ABIE41_RS07205at 1481.736 kb on - strand, within ABIE41_RS07205at 1481.736 kb on - strand, within ABIE41_RS07205at 1481.736 kb on - strand, within ABIE41_RS07205at 1481.736 kb on - strand, within ABIE41_RS07205at 1481.965 kb on + strand, within ABIE41_RS07205at 1481.966 kb on - strand, within ABIE41_RS07205at 1481.966 kb on - strand, within ABIE41_RS07205at 1481.966 kb on - strand, within ABIE41_RS07205at 1482.019 kb on + strand, within ABIE41_RS07205at 1482.019 kb on + strand, within ABIE41_RS07205at 1482.019 kb on + strand, within ABIE41_RS07205at 1482.019 kb on + strand, within ABIE41_RS07205at 1482.020 kb on - strand, within ABIE41_RS07205at 1482.020 kb on - strand, within ABIE41_RS07205at 1482.020 kb on - strand, within ABIE41_RS07205at 1482.020 kb on - strand, within ABIE41_RS07205at 1482.020 kb on - strand, within ABIE41_RS07205at 1482.020 kb on - strand, within ABIE41_RS07205at 1482.020 kb on - strand, within ABIE41_RS07205at 1482.020 kb on - strand, within ABIE41_RS07205at 1482.022 kb on + strand, within ABIE41_RS07205at 1482.022 kb on + strand, within ABIE41_RS07205at 1482.022 kb on + strand, within ABIE41_RS07205at 1482.022 kb on + strand, within ABIE41_RS07205at 1482.023 kb on - strand, within ABIE41_RS07205at 1482.023 kb on - strand, within ABIE41_RS07205at 1482.023 kb on - strand, within ABIE41_RS07205at 1482.023 kb on - strand, within ABIE41_RS07205at 1482.023 kb on - strand, within ABIE41_RS07205at 1482.023 kb on - strand, within ABIE41_RS07205at 1482.023 kb on - strand, within ABIE41_RS07205at 1482.031 kb on + strand, within ABIE41_RS07205at 1482.031 kb on + strand, within ABIE41_RS07205at 1482.031 kb on + strand, within ABIE41_RS07205at 1482.031 kb on + strand, within ABIE41_RS07205at 1482.032 kb on - strand, within ABIE41_RS07205at 1482.032 kb on - strand, within ABIE41_RS07205at 1482.032 kb on - strand, within ABIE41_RS07205at 1482.032 kb on - strand, within ABIE41_RS07205at 1482.032 kb on - strand, within ABIE41_RS07205at 1482.182 kb on + strandat 1482.182 kb on + strandat 1482.182 kb on + strandat 1482.182 kb on + strandat 1482.183 kb on - strandat 1482.183 kb on - strandat 1482.183 kb on - strandat 1482.256 kb on + strandat 1482.256 kb on + strandat 1482.256 kb on + strandat 1482.256 kb on + strandat 1482.257 kb on - strandat 1482.257 kb on - strandat 1482.257 kb on - strandat 1482.257 kb on - strandat 1482.257 kb on - strandat 1482.284 kb on + strandat 1482.284 kb on + strandat 1482.285 kb on - strandat 1482.298 kb on + strandat 1482.298 kb on + strandat 1482.299 kb on - strandat 1482.299 kb on - strandat 1482.299 kb on - strandat 1482.304 kb on + strandat 1482.304 kb on + strandat 1482.304 kb on + strandat 1482.304 kb on + strandat 1482.305 kb on - strandat 1482.305 kb on - strandat 1482.305 kb on - strandat 1482.305 kb on - strandat 1482.305 kb on - strandat 1482.305 kb on - strandat 1482.305 kb on - strandat 1482.305 kb on - strandat 1482.305 kb on - strandat 1482.423 kb on + strandat 1482.424 kb on - strandat 1482.424 kb on - strandat 1482.424 kb on - strandat 1482.424 kb on - strandat 1482.648 kb on + strand, within ABIE41_RS07210at 1482.648 kb on + strand, within ABIE41_RS07210at 1482.648 kb on + strand, within ABIE41_RS07210at 1482.648 kb on + strand, within ABIE41_RS07210at 1482.648 kb on + strand, within ABIE41_RS07210at 1482.648 kb on + strand, within ABIE41_RS07210at 1482.649 kb on - strand, within ABIE41_RS07210at 1482.649 kb on - strand, within ABIE41_RS07210at 1482.649 kb on - strand, within ABIE41_RS07210at 1482.649 kb on - strand, within ABIE41_RS07210at 1482.649 kb on - strand, within ABIE41_RS07210at 1482.649 kb on - strand, within ABIE41_RS07210at 1482.649 kb on - strand, within ABIE41_RS07210at 1482.649 kb on - strand, within ABIE41_RS07210at 1482.649 kb on - strand, within ABIE41_RS07210at 1482.649 kb on - strand, within ABIE41_RS07210at 1482.650 kb on - strand, within ABIE41_RS07210at 1482.730 kb on + strand, within ABIE41_RS07210at 1482.730 kb on + strand, within ABIE41_RS07210at 1482.731 kb on - strand, within ABIE41_RS07210at 1482.731 kb on - strand, within ABIE41_RS07210at 1482.742 kb on - strand, within ABIE41_RS07210at 1482.742 kb on - strand, within ABIE41_RS07210at 1482.742 kb on - strand, within ABIE41_RS07210at 1482.742 kb on - strand, within ABIE41_RS07210at 1482.802 kb on + strand, within ABIE41_RS07210at 1482.864 kb on + strand, within ABIE41_RS07210at 1482.867 kb on + strand, within ABIE41_RS07210at 1482.867 kb on + strand, within ABIE41_RS07210at 1482.868 kb on - strand, within ABIE41_RS07210at 1482.954 kb on + strand, within ABIE41_RS07210at 1482.954 kb on + strand, within ABIE41_RS07210at 1482.955 kb on - strand, within ABIE41_RS07210at 1483.071 kb on + strand, within ABIE41_RS07210at 1483.071 kb on + strand, within ABIE41_RS07210at 1483.071 kb on + strand, within ABIE41_RS07210at 1483.071 kb on + strand, within ABIE41_RS07210at 1483.072 kb on - strand, within ABIE41_RS07210at 1483.072 kb on - strand, within ABIE41_RS07210at 1483.072 kb on - strand, within ABIE41_RS07210at 1483.072 kb on - strand, within ABIE41_RS07210at 1483.072 kb on - strand, within ABIE41_RS07210at 1483.072 kb on - strand, within ABIE41_RS07210at 1483.072 kb on - strand, within ABIE41_RS07210at 1483.072 kb on - strand, within ABIE41_RS07210at 1483.072 kb on - strand, within ABIE41_RS07210at 1483.128 kb on + strand, within ABIE41_RS07210at 1483.128 kb on + strand, within ABIE41_RS07210at 1483.165 kb on + strand, within ABIE41_RS07210at 1483.165 kb on + strand, within ABIE41_RS07210at 1483.165 kb on + strand, within ABIE41_RS07210at 1483.166 kb on - strand, within ABIE41_RS07210at 1483.167 kb on + strand, within ABIE41_RS07210at 1483.173 kb on + strand, within ABIE41_RS07210at 1483.173 kb on + strand, within ABIE41_RS07210at 1483.260 kb on + strand, within ABIE41_RS07210at 1483.260 kb on + strand, within ABIE41_RS07210at 1483.260 kb on + strand, within ABIE41_RS07210at 1483.261 kb on - strand, within ABIE41_RS07210at 1483.266 kb on + strand, within ABIE41_RS07210at 1483.266 kb on + strand, within ABIE41_RS07210at 1483.266 kb on + strand, within ABIE41_RS07210at 1483.267 kb on - strand, within ABIE41_RS07210at 1483.267 kb on - strand, within ABIE41_RS07210at 1483.267 kb on - strand, within ABIE41_RS07210at 1483.267 kb on - strand, within ABIE41_RS07210

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Per-strain Table

Position Strand Gene LocusTag Fraction DMSO control
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1,480,476 + ABIE41_RS07200 0.19 +0.4
1,480,477 - ABIE41_RS07200 0.19 -0.3
1,481,389 - ABIE41_RS07205 0.21 +0.0
1,481,455 + ABIE41_RS07205 0.27 +2.3
1,481,455 + ABIE41_RS07205 0.27 -0.6
1,481,455 + ABIE41_RS07205 0.27 +0.0
1,481,455 + ABIE41_RS07205 0.27 -0.5
1,481,456 - ABIE41_RS07205 0.27 -0.3
1,481,456 - ABIE41_RS07205 0.27 +0.6
1,481,456 - ABIE41_RS07205 0.27 -0.1
1,481,456 - ABIE41_RS07205 0.27 -0.2
1,481,467 + ABIE41_RS07205 0.28 +0.2
1,481,467 + ABIE41_RS07205 0.28 +0.6
1,481,468 - ABIE41_RS07205 0.28 -0.7
1,481,468 - ABIE41_RS07205 0.28 +0.2
1,481,468 - ABIE41_RS07205 0.28 +0.3
1,481,680 + ABIE41_RS07205 0.47 +0.1
1,481,680 + ABIE41_RS07205 0.47 +1.4
1,481,680 + ABIE41_RS07205 0.47 +0.5
1,481,680 + ABIE41_RS07205 0.47 +0.0
1,481,681 - ABIE41_RS07205 0.47 +5.0
1,481,681 - ABIE41_RS07205 0.47 +0.2
1,481,681 - ABIE41_RS07205 0.47 +0.2
1,481,681 - ABIE41_RS07205 0.47 -0.1
1,481,681 - ABIE41_RS07205 0.47 +0.4
1,481,735 + ABIE41_RS07205 0.51 -0.4
1,481,735 + ABIE41_RS07205 0.51 +1.5
1,481,735 + ABIE41_RS07205 0.51 -1.9
1,481,735 + ABIE41_RS07205 0.51 -1.4
1,481,735 + ABIE41_RS07205 0.51 -0.2
1,481,735 + ABIE41_RS07205 0.51 -2.5
1,481,735 + ABIE41_RS07205 0.51 +0.4
1,481,736 - ABIE41_RS07205 0.51 -0.5
1,481,736 - ABIE41_RS07205 0.51 -0.8
1,481,736 - ABIE41_RS07205 0.51 +0.3
1,481,736 - ABIE41_RS07205 0.51 +0.7
1,481,736 - ABIE41_RS07205 0.51 +0.4
1,481,736 - ABIE41_RS07205 0.51 -1.1
1,481,736 - ABIE41_RS07205 0.51 +1.8
1,481,736 - ABIE41_RS07205 0.51 -2.9
1,481,965 + ABIE41_RS07205 0.71 -0.1
1,481,966 - ABIE41_RS07205 0.72 -1.4
1,481,966 - ABIE41_RS07205 0.72 -0.1
1,481,966 - ABIE41_RS07205 0.72 +0.4
1,482,019 + ABIE41_RS07205 0.76 -0.3
1,482,019 + ABIE41_RS07205 0.76 +1.7
1,482,019 + ABIE41_RS07205 0.76 +0.3
1,482,019 + ABIE41_RS07205 0.76 -0.1
1,482,020 - ABIE41_RS07205 0.76 -1.0
1,482,020 - ABIE41_RS07205 0.76 +1.4
1,482,020 - ABIE41_RS07205 0.76 +2.9
1,482,020 - ABIE41_RS07205 0.76 +0.3
1,482,020 - ABIE41_RS07205 0.76 +0.4
1,482,020 - ABIE41_RS07205 0.76 -1.7
1,482,020 - ABIE41_RS07205 0.76 -0.7
1,482,020 - ABIE41_RS07205 0.76 +0.5
1,482,022 + ABIE41_RS07205 0.76 +0.6
1,482,022 + ABIE41_RS07205 0.76 -0.2
1,482,022 + ABIE41_RS07205 0.76 +0.3
1,482,022 + ABIE41_RS07205 0.76 +0.1
1,482,023 - ABIE41_RS07205 0.77 +1.0
1,482,023 - ABIE41_RS07205 0.77 +0.3
1,482,023 - ABIE41_RS07205 0.77 +0.4
1,482,023 - ABIE41_RS07205 0.77 +1.6
1,482,023 - ABIE41_RS07205 0.77 +2.6
1,482,023 - ABIE41_RS07205 0.77 +0.1
1,482,023 - ABIE41_RS07205 0.77 -0.4
1,482,031 + ABIE41_RS07205 0.77 -1.5
1,482,031 + ABIE41_RS07205 0.77 +0.0
1,482,031 + ABIE41_RS07205 0.77 +0.7
1,482,031 + ABIE41_RS07205 0.77 +0.2
1,482,032 - ABIE41_RS07205 0.77 +0.3
1,482,032 - ABIE41_RS07205 0.77 -2.1
1,482,032 - ABIE41_RS07205 0.77 +0.2
1,482,032 - ABIE41_RS07205 0.77 +1.2
1,482,032 - ABIE41_RS07205 0.77 +0.2
1,482,182 + -0.2
1,482,182 + -0.8
1,482,182 + +0.4
1,482,182 + +0.3
1,482,183 - -0.4
1,482,183 - +0.3
1,482,183 - -1.3
1,482,256 + +0.0
1,482,256 + -0.5
1,482,256 + -3.1
1,482,256 + -0.4
1,482,257 - +1.4
1,482,257 - -0.4
1,482,257 - +0.1
1,482,257 - -2.5
1,482,257 - +0.9
1,482,284 + -0.0
1,482,284 + +1.0
1,482,285 - -0.0
1,482,298 + -0.1
1,482,298 + +0.2
1,482,299 - +1.0
1,482,299 - -0.8
1,482,299 - +0.0
1,482,304 + -0.4
1,482,304 + +0.3
1,482,304 + +0.1
1,482,304 + -1.9
1,482,305 - +1.5
1,482,305 - +0.4
1,482,305 - +0.1
1,482,305 - -0.3
1,482,305 - +0.1
1,482,305 - -0.2
1,482,305 - -0.8
1,482,305 - +0.4
1,482,305 - -1.8
1,482,423 + +0.8
1,482,424 - +0.3
1,482,424 - -0.6
1,482,424 - -0.2
1,482,424 - +1.0
1,482,648 + ABIE41_RS07210 0.30 +1.3
1,482,648 + ABIE41_RS07210 0.30 -0.8
1,482,648 + ABIE41_RS07210 0.30 -0.1
1,482,648 + ABIE41_RS07210 0.30 -0.7
1,482,648 + ABIE41_RS07210 0.30 -1.1
1,482,648 + ABIE41_RS07210 0.30 -0.5
1,482,649 - ABIE41_RS07210 0.30 -0.2
1,482,649 - ABIE41_RS07210 0.30 -0.3
1,482,649 - ABIE41_RS07210 0.30 +0.8
1,482,649 - ABIE41_RS07210 0.30 -0.2
1,482,649 - ABIE41_RS07210 0.30 -0.8
1,482,649 - ABIE41_RS07210 0.30 -0.2
1,482,649 - ABIE41_RS07210 0.30 -1.1
1,482,649 - ABIE41_RS07210 0.30 +0.2
1,482,649 - ABIE41_RS07210 0.30 +0.5
1,482,649 - ABIE41_RS07210 0.30 -0.4
1,482,650 - ABIE41_RS07210 0.30 +0.2
1,482,730 + ABIE41_RS07210 0.37 -0.2
1,482,730 + ABIE41_RS07210 0.37 -1.1
1,482,731 - ABIE41_RS07210 0.37 -0.1
1,482,731 - ABIE41_RS07210 0.37 +0.6
1,482,742 - ABIE41_RS07210 0.38 -0.8
1,482,742 - ABIE41_RS07210 0.38 -0.4
1,482,742 - ABIE41_RS07210 0.38 -3.1
1,482,742 - ABIE41_RS07210 0.38 -0.1
1,482,802 + ABIE41_RS07210 0.44 +2.3
1,482,864 + ABIE41_RS07210 0.50 -0.6
1,482,867 + ABIE41_RS07210 0.50 -0.5
1,482,867 + ABIE41_RS07210 0.50 -0.1
1,482,868 - ABIE41_RS07210 0.50 -1.6
1,482,954 + ABIE41_RS07210 0.58 -0.6
1,482,954 + ABIE41_RS07210 0.58 -0.7
1,482,955 - ABIE41_RS07210 0.58 -0.6
1,483,071 + ABIE41_RS07210 0.68 +0.0
1,483,071 + ABIE41_RS07210 0.68 +0.1
1,483,071 + ABIE41_RS07210 0.68 -0.0
1,483,071 + ABIE41_RS07210 0.68 -0.2
1,483,072 - ABIE41_RS07210 0.69 -0.3
1,483,072 - ABIE41_RS07210 0.69 -0.4
1,483,072 - ABIE41_RS07210 0.69 -0.2
1,483,072 - ABIE41_RS07210 0.69 -0.5
1,483,072 - ABIE41_RS07210 0.69 -1.5
1,483,072 - ABIE41_RS07210 0.69 -1.0
1,483,072 - ABIE41_RS07210 0.69 -1.1
1,483,072 - ABIE41_RS07210 0.69 +1.0
1,483,072 - ABIE41_RS07210 0.69 -1.3
1,483,128 + ABIE41_RS07210 0.74 +0.6
1,483,128 + ABIE41_RS07210 0.74 -0.2
1,483,165 + ABIE41_RS07210 0.77 +0.3
1,483,165 + ABIE41_RS07210 0.77 -0.4
1,483,165 + ABIE41_RS07210 0.77 -0.2
1,483,166 - ABIE41_RS07210 0.77 +1.0
1,483,167 + ABIE41_RS07210 0.77 -2.0
1,483,173 + ABIE41_RS07210 0.78 -0.4
1,483,173 + ABIE41_RS07210 0.78 +1.0
1,483,260 + ABIE41_RS07210 0.86 -1.0
1,483,260 + ABIE41_RS07210 0.86 -2.0
1,483,260 + ABIE41_RS07210 0.86 -0.0
1,483,261 - ABIE41_RS07210 0.86 -0.7
1,483,266 + ABIE41_RS07210 0.86 -0.0
1,483,266 + ABIE41_RS07210 0.86 -0.1
1,483,266 + ABIE41_RS07210 0.86 -2.4
1,483,267 - ABIE41_RS07210 0.86 +0.1
1,483,267 - ABIE41_RS07210 0.86 -0.0
1,483,267 - ABIE41_RS07210 0.86 -0.4
1,483,267 - ABIE41_RS07210 0.86 -0.7

Or see this region's nucleotide sequence