Strain Fitness in Bosea sp. OAE506 around ABIE41_RS01535

Experiment: DMSO control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS01530 and ABIE41_RS01535 are separated by 149 nucleotidesABIE41_RS01535 and ABIE41_RS01540 are separated by 9 nucleotidesABIE41_RS01540 and ABIE41_RS01545 are separated by 155 nucleotides ABIE41_RS01530: ABIE41_RS01530 - protein adenylyltransferase SelO, at 304,230 to 305,684 _RS01530 ABIE41_RS01535: ABIE41_RS01535 - gamma-glutamyltransferase, at 305,834 to 307,432 _RS01535 ABIE41_RS01540: ABIE41_RS01540 - Rid family hydrolase, at 307,442 to 307,786 _RS01540 ABIE41_RS01545: ABIE41_RS01545 - FAD-dependent oxidoreductase, at 307,942 to 309,093 _RS01545 Position (kb) 305 306 307 308Strain fitness (log2 ratio) -2 -1 0 1 2 3at 304.879 kb on - strand, within ABIE41_RS01530at 304.879 kb on - strand, within ABIE41_RS01530at 304.973 kb on + strand, within ABIE41_RS01530at 304.974 kb on - strand, within ABIE41_RS01530at 305.004 kb on + strand, within ABIE41_RS01530at 305.031 kb on + strand, within ABIE41_RS01530at 305.031 kb on + strand, within ABIE41_RS01530at 305.076 kb on + strand, within ABIE41_RS01530at 305.077 kb on - strand, within ABIE41_RS01530at 305.082 kb on + strand, within ABIE41_RS01530at 305.082 kb on + strand, within ABIE41_RS01530at 305.226 kb on + strand, within ABIE41_RS01530at 305.226 kb on + strand, within ABIE41_RS01530at 305.226 kb on + strand, within ABIE41_RS01530at 305.226 kb on + strand, within ABIE41_RS01530at 305.227 kb on - strand, within ABIE41_RS01530at 305.227 kb on - strand, within ABIE41_RS01530at 305.499 kb on + strand, within ABIE41_RS01530at 305.499 kb on + strand, within ABIE41_RS01530at 305.499 kb on + strand, within ABIE41_RS01530at 305.499 kb on + strand, within ABIE41_RS01530at 305.499 kb on + strand, within ABIE41_RS01530at 305.500 kb on - strand, within ABIE41_RS01530at 305.500 kb on - strand, within ABIE41_RS01530at 305.500 kb on - strand, within ABIE41_RS01530at 305.500 kb on - strand, within ABIE41_RS01530at 305.500 kb on - strand, within ABIE41_RS01530at 305.501 kb on + strand, within ABIE41_RS01530at 305.502 kb on - strand, within ABIE41_RS01530at 305.613 kb on - strandat 306.323 kb on + strand, within ABIE41_RS01535at 306.323 kb on + strand, within ABIE41_RS01535at 306.324 kb on - strand, within ABIE41_RS01535at 306.344 kb on + strand, within ABIE41_RS01535at 306.344 kb on + strand, within ABIE41_RS01535at 306.344 kb on + strand, within ABIE41_RS01535at 306.344 kb on + strand, within ABIE41_RS01535at 306.344 kb on + strand, within ABIE41_RS01535at 306.344 kb on + strand, within ABIE41_RS01535at 306.345 kb on - strand, within ABIE41_RS01535at 306.345 kb on - strand, within ABIE41_RS01535at 306.345 kb on - strand, within ABIE41_RS01535at 306.345 kb on - strand, within ABIE41_RS01535at 306.345 kb on - strand, within ABIE41_RS01535at 306.345 kb on - strand, within ABIE41_RS01535at 306.345 kb on - strand, within ABIE41_RS01535at 306.345 kb on - strand, within ABIE41_RS01535at 306.345 kb on - strand, within ABIE41_RS01535at 306.345 kb on - strand, within ABIE41_RS01535at 306.447 kb on - strand, within ABIE41_RS01535at 306.508 kb on + strand, within ABIE41_RS01535at 306.621 kb on + strand, within ABIE41_RS01535at 306.621 kb on + strand, within ABIE41_RS01535at 306.622 kb on - strand, within ABIE41_RS01535at 306.877 kb on + strand, within ABIE41_RS01535at 306.877 kb on + strand, within ABIE41_RS01535at 306.878 kb on - strand, within ABIE41_RS01535at 306.878 kb on - strand, within ABIE41_RS01535at 307.001 kb on + strand, within ABIE41_RS01535at 307.001 kb on + strand, within ABIE41_RS01535at 307.130 kb on + strand, within ABIE41_RS01535at 307.130 kb on + strand, within ABIE41_RS01535at 307.130 kb on + strand, within ABIE41_RS01535at 307.130 kb on + strand, within ABIE41_RS01535at 307.131 kb on - strand, within ABIE41_RS01535at 307.131 kb on - strand, within ABIE41_RS01535at 307.132 kb on - strand, within ABIE41_RS01535at 307.271 kb on - strand, within ABIE41_RS01535at 307.306 kb on + strandat 307.415 kb on + strandat 307.415 kb on + strandat 307.415 kb on + strandat 307.415 kb on + strandat 307.415 kb on + strandat 307.415 kb on + strandat 307.416 kb on - strandat 307.416 kb on - strandat 307.821 kb on + strandat 307.821 kb on + strandat 307.821 kb on + strandat 307.822 kb on - strandat 307.902 kb on - strandat 308.105 kb on + strand, within ABIE41_RS01545at 308.105 kb on + strand, within ABIE41_RS01545

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Per-strain Table

Position Strand Gene LocusTag Fraction DMSO control
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304,879 - ABIE41_RS01530 0.45 +0.5
304,879 - ABIE41_RS01530 0.45 +0.2
304,973 + ABIE41_RS01530 0.51 +0.6
304,974 - ABIE41_RS01530 0.51 +0.8
305,004 + ABIE41_RS01530 0.53 -0.2
305,031 + ABIE41_RS01530 0.55 +1.2
305,031 + ABIE41_RS01530 0.55 -0.8
305,076 + ABIE41_RS01530 0.58 +0.1
305,077 - ABIE41_RS01530 0.58 +0.0
305,082 + ABIE41_RS01530 0.59 -0.8
305,082 + ABIE41_RS01530 0.59 -0.4
305,226 + ABIE41_RS01530 0.68 +0.1
305,226 + ABIE41_RS01530 0.68 -0.7
305,226 + ABIE41_RS01530 0.68 -1.4
305,226 + ABIE41_RS01530 0.68 -0.4
305,227 - ABIE41_RS01530 0.69 +0.4
305,227 - ABIE41_RS01530 0.69 -0.3
305,499 + ABIE41_RS01530 0.87 -0.4
305,499 + ABIE41_RS01530 0.87 -0.0
305,499 + ABIE41_RS01530 0.87 -0.2
305,499 + ABIE41_RS01530 0.87 -0.2
305,499 + ABIE41_RS01530 0.87 +1.0
305,500 - ABIE41_RS01530 0.87 +0.4
305,500 - ABIE41_RS01530 0.87 +0.6
305,500 - ABIE41_RS01530 0.87 -0.6
305,500 - ABIE41_RS01530 0.87 +0.1
305,500 - ABIE41_RS01530 0.87 -2.0
305,501 + ABIE41_RS01530 0.87 -0.1
305,502 - ABIE41_RS01530 0.87 +0.7
305,613 - +0.2
306,323 + ABIE41_RS01535 0.31 -0.7
306,323 + ABIE41_RS01535 0.31 -0.2
306,324 - ABIE41_RS01535 0.31 +0.6
306,344 + ABIE41_RS01535 0.32 +0.9
306,344 + ABIE41_RS01535 0.32 +1.0
306,344 + ABIE41_RS01535 0.32 -0.8
306,344 + ABIE41_RS01535 0.32 -0.2
306,344 + ABIE41_RS01535 0.32 +0.4
306,344 + ABIE41_RS01535 0.32 -1.5
306,345 - ABIE41_RS01535 0.32 +0.3
306,345 - ABIE41_RS01535 0.32 +1.0
306,345 - ABIE41_RS01535 0.32 -2.1
306,345 - ABIE41_RS01535 0.32 -0.5
306,345 - ABIE41_RS01535 0.32 -0.5
306,345 - ABIE41_RS01535 0.32 -0.2
306,345 - ABIE41_RS01535 0.32 -0.9
306,345 - ABIE41_RS01535 0.32 +0.3
306,345 - ABIE41_RS01535 0.32 -0.9
306,345 - ABIE41_RS01535 0.32 -0.5
306,447 - ABIE41_RS01535 0.38 -0.2
306,508 + ABIE41_RS01535 0.42 +0.4
306,621 + ABIE41_RS01535 0.49 -0.4
306,621 + ABIE41_RS01535 0.49 -0.7
306,622 - ABIE41_RS01535 0.49 -1.1
306,877 + ABIE41_RS01535 0.65 +0.4
306,877 + ABIE41_RS01535 0.65 -0.3
306,878 - ABIE41_RS01535 0.65 -0.6
306,878 - ABIE41_RS01535 0.65 +0.2
307,001 + ABIE41_RS01535 0.73 +0.4
307,001 + ABIE41_RS01535 0.73 +0.5
307,130 + ABIE41_RS01535 0.81 +0.6
307,130 + ABIE41_RS01535 0.81 -1.7
307,130 + ABIE41_RS01535 0.81 +0.2
307,130 + ABIE41_RS01535 0.81 -0.4
307,131 - ABIE41_RS01535 0.81 +0.3
307,131 - ABIE41_RS01535 0.81 +0.2
307,132 - ABIE41_RS01535 0.81 +0.1
307,271 - ABIE41_RS01535 0.90 -1.9
307,306 + +1.3
307,415 + -0.7
307,415 + -1.0
307,415 + +0.4
307,415 + -0.4
307,415 + -0.2
307,415 + -0.4
307,416 - +0.6
307,416 - +0.5
307,821 + +1.0
307,821 + +3.0
307,821 + -0.8
307,822 - +0.1
307,902 - -2.0
308,105 + ABIE41_RS01545 0.14 +0.6
308,105 + ABIE41_RS01545 0.14 +0.6

Or see this region's nucleotide sequence