Experiment: DMSO control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS00475 and ABIE41_RS00480 are separated by 8 nucleotides ABIE41_RS00480 and ABIE41_RS00485 overlap by 61 nucleotides ABIE41_RS00485 and ABIE41_RS00490 are separated by 28 nucleotides
ABIE41_RS00475: ABIE41_RS00475 - SAVED domain-containing protein, at 84,563 to 85,243
_RS00475
ABIE41_RS00480: ABIE41_RS00480 - ATP-binding protein, at 85,252 to 85,830
_RS00480
ABIE41_RS00485: ABIE41_RS00485 - response regulator, at 85,770 to 86,198
_RS00485
ABIE41_RS00490: ABIE41_RS00490 - PAS domain-containing protein, at 86,227 to 87,321
_RS00490
Position (kb) 85
86
87 Strain fitness (log2 ratio) -2
-1
0
1
2 at 84.779 kb on + strand, within ABIE41_RS00475 at 84.780 kb on - strand, within ABIE41_RS00475 at 84.791 kb on + strand, within ABIE41_RS00475 at 84.861 kb on + strand, within ABIE41_RS00475 at 84.861 kb on + strand, within ABIE41_RS00475 at 84.861 kb on + strand, within ABIE41_RS00475 at 84.862 kb on - strand, within ABIE41_RS00475 at 84.927 kb on + strand, within ABIE41_RS00475 at 84.953 kb on + strand, within ABIE41_RS00475 at 84.953 kb on + strand, within ABIE41_RS00475 at 84.953 kb on + strand, within ABIE41_RS00475 at 84.953 kb on + strand, within ABIE41_RS00475 at 84.953 kb on + strand, within ABIE41_RS00475 at 84.953 kb on + strand, within ABIE41_RS00475 at 84.953 kb on + strand, within ABIE41_RS00475 at 84.953 kb on + strand, within ABIE41_RS00475 at 84.953 kb on + strand, within ABIE41_RS00475 at 84.954 kb on - strand, within ABIE41_RS00475 at 84.954 kb on - strand, within ABIE41_RS00475 at 84.954 kb on - strand, within ABIE41_RS00475 at 84.954 kb on - strand, within ABIE41_RS00475 at 84.954 kb on - strand, within ABIE41_RS00475 at 84.954 kb on - strand, within ABIE41_RS00475 at 84.954 kb on - strand, within ABIE41_RS00475 at 84.955 kb on + strand, within ABIE41_RS00475 at 84.955 kb on + strand, within ABIE41_RS00475 at 84.955 kb on + strand, within ABIE41_RS00475 at 84.955 kb on + strand, within ABIE41_RS00475 at 84.956 kb on - strand, within ABIE41_RS00475 at 84.956 kb on - strand, within ABIE41_RS00475 at 84.956 kb on - strand, within ABIE41_RS00475 at 84.956 kb on - strand, within ABIE41_RS00475 at 84.956 kb on - strand, within ABIE41_RS00475 at 85.102 kb on - strand, within ABIE41_RS00475 at 85.122 kb on + strand, within ABIE41_RS00475 at 85.123 kb on - strand, within ABIE41_RS00475 at 85.123 kb on - strand, within ABIE41_RS00475 at 85.123 kb on - strand, within ABIE41_RS00475 at 85.271 kb on - strand at 85.377 kb on - strand, within ABIE41_RS00480 at 85.398 kb on + strand, within ABIE41_RS00480 at 85.399 kb on - strand, within ABIE41_RS00480 at 85.399 kb on - strand, within ABIE41_RS00480 at 85.431 kb on + strand, within ABIE41_RS00480 at 85.432 kb on - strand, within ABIE41_RS00480 at 85.432 kb on - strand, within ABIE41_RS00480 at 85.479 kb on + strand, within ABIE41_RS00480 at 85.479 kb on + strand, within ABIE41_RS00480 at 85.479 kb on + strand, within ABIE41_RS00480 at 85.479 kb on + strand, within ABIE41_RS00480 at 85.479 kb on + strand, within ABIE41_RS00480 at 85.479 kb on + strand, within ABIE41_RS00480 at 85.479 kb on + strand, within ABIE41_RS00480 at 85.480 kb on - strand, within ABIE41_RS00480 at 85.480 kb on - strand, within ABIE41_RS00480 at 85.480 kb on - strand, within ABIE41_RS00480 at 85.480 kb on - strand, within ABIE41_RS00480 at 85.480 kb on - strand, within ABIE41_RS00480 at 85.480 kb on - strand, within ABIE41_RS00480 at 85.586 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.588 kb on + strand, within ABIE41_RS00480 at 85.589 kb on - strand, within ABIE41_RS00480 at 85.589 kb on - strand, within ABIE41_RS00480 at 85.589 kb on - strand, within ABIE41_RS00480 at 85.593 kb on + strand, within ABIE41_RS00480 at 85.593 kb on + strand, within ABIE41_RS00480 at 85.593 kb on + strand, within ABIE41_RS00480 at 85.594 kb on - strand, within ABIE41_RS00480 at 85.594 kb on - strand, within ABIE41_RS00480 at 85.594 kb on - strand, within ABIE41_RS00480 at 85.594 kb on - strand, within ABIE41_RS00480 at 85.594 kb on - strand, within ABIE41_RS00480 at 85.661 kb on + strand, within ABIE41_RS00480 at 85.661 kb on + strand, within ABIE41_RS00480 at 85.661 kb on + strand, within ABIE41_RS00480 at 85.661 kb on + strand, within ABIE41_RS00480 at 85.661 kb on + strand, within ABIE41_RS00480 at 85.661 kb on + strand, within ABIE41_RS00480 at 85.662 kb on - strand, within ABIE41_RS00480 at 85.662 kb on - strand, within ABIE41_RS00480 at 85.867 kb on + strand, within ABIE41_RS00485 at 85.867 kb on + strand, within ABIE41_RS00485 at 85.867 kb on + strand, within ABIE41_RS00485 at 85.868 kb on - strand, within ABIE41_RS00485 at 85.868 kb on - strand, within ABIE41_RS00485 at 85.868 kb on - strand, within ABIE41_RS00485 at 85.868 kb on - strand, within ABIE41_RS00485 at 85.969 kb on + strand, within ABIE41_RS00485 at 85.969 kb on + strand, within ABIE41_RS00485 at 85.969 kb on + strand, within ABIE41_RS00485 at 85.970 kb on - strand, within ABIE41_RS00485 at 85.970 kb on - strand, within ABIE41_RS00485 at 86.228 kb on + strand at 86.228 kb on + strand at 86.228 kb on + strand at 86.228 kb on + strand at 86.228 kb on + strand at 86.228 kb on + strand at 86.228 kb on + strand at 86.228 kb on + strand at 86.229 kb on - strand at 86.229 kb on - strand at 86.229 kb on - strand at 86.229 kb on - strand at 86.229 kb on - strand at 86.292 kb on + strand at 86.293 kb on - strand at 86.391 kb on + strand, within ABIE41_RS00490 at 86.391 kb on + strand, within ABIE41_RS00490 at 86.391 kb on + strand, within ABIE41_RS00490 at 86.392 kb on - strand, within ABIE41_RS00490 at 86.392 kb on - strand, within ABIE41_RS00490 at 86.393 kb on + strand, within ABIE41_RS00490 at 86.393 kb on + strand, within ABIE41_RS00490 at 86.393 kb on + strand, within ABIE41_RS00490 at 86.393 kb on + strand, within ABIE41_RS00490 at 86.393 kb on + strand, within ABIE41_RS00490 at 86.393 kb on + strand, within ABIE41_RS00490 at 86.393 kb on + strand, within ABIE41_RS00490 at 86.394 kb on - strand, within ABIE41_RS00490 at 86.394 kb on - strand, within ABIE41_RS00490 at 86.394 kb on - strand, within ABIE41_RS00490 at 86.394 kb on - strand, within ABIE41_RS00490 at 86.394 kb on - strand, within ABIE41_RS00490 at 86.394 kb on - strand, within ABIE41_RS00490 at 86.394 kb on - strand, within ABIE41_RS00490 at 86.981 kb on + strand, within ABIE41_RS00490 at 86.981 kb on + strand, within ABIE41_RS00490 at 86.981 kb on + strand, within ABIE41_RS00490 at 87.017 kb on + strand, within ABIE41_RS00490 at 87.017 kb on + strand, within ABIE41_RS00490 at 87.018 kb on - strand, within ABIE41_RS00490
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO control remove 84,779 + ABIE41_RS00475 0.32 +1.0 84,780 - ABIE41_RS00475 0.32 -1.0 84,791 + ABIE41_RS00475 0.33 -0.5 84,861 + ABIE41_RS00475 0.44 -0.3 84,861 + ABIE41_RS00475 0.44 -0.0 84,861 + ABIE41_RS00475 0.44 -0.6 84,862 - ABIE41_RS00475 0.44 +0.4 84,927 + ABIE41_RS00475 0.53 +1.3 84,953 + ABIE41_RS00475 0.57 +1.8 84,953 + ABIE41_RS00475 0.57 +2.2 84,953 + ABIE41_RS00475 0.57 -0.6 84,953 + ABIE41_RS00475 0.57 +2.3 84,953 + ABIE41_RS00475 0.57 -0.6 84,953 + ABIE41_RS00475 0.57 -0.2 84,953 + ABIE41_RS00475 0.57 -0.4 84,953 + ABIE41_RS00475 0.57 +0.7 84,953 + ABIE41_RS00475 0.57 +2.3 84,954 - ABIE41_RS00475 0.57 -0.3 84,954 - ABIE41_RS00475 0.57 +0.1 84,954 - ABIE41_RS00475 0.57 -0.5 84,954 - ABIE41_RS00475 0.57 +0.5 84,954 - ABIE41_RS00475 0.57 -1.2 84,954 - ABIE41_RS00475 0.57 -0.1 84,954 - ABIE41_RS00475 0.57 +0.5 84,955 + ABIE41_RS00475 0.58 +0.1 84,955 + ABIE41_RS00475 0.58 +0.2 84,955 + ABIE41_RS00475 0.58 -1.6 84,955 + ABIE41_RS00475 0.58 -0.2 84,956 - ABIE41_RS00475 0.58 -0.2 84,956 - ABIE41_RS00475 0.58 +1.1 84,956 - ABIE41_RS00475 0.58 +0.5 84,956 - ABIE41_RS00475 0.58 -0.7 84,956 - ABIE41_RS00475 0.58 +1.3 85,102 - ABIE41_RS00475 0.79 -0.3 85,122 + ABIE41_RS00475 0.82 +1.7 85,123 - ABIE41_RS00475 0.82 +0.0 85,123 - ABIE41_RS00475 0.82 -0.7 85,123 - ABIE41_RS00475 0.82 -0.2 85,271 - +0.1 85,377 - ABIE41_RS00480 0.22 +0.5 85,398 + ABIE41_RS00480 0.25 +0.4 85,399 - ABIE41_RS00480 0.25 +0.3 85,399 - ABIE41_RS00480 0.25 -0.2 85,431 + ABIE41_RS00480 0.31 -1.9 85,432 - ABIE41_RS00480 0.31 +0.2 85,432 - ABIE41_RS00480 0.31 +2.2 85,479 + ABIE41_RS00480 0.39 -0.4 85,479 + ABIE41_RS00480 0.39 -1.7 85,479 + ABIE41_RS00480 0.39 -0.6 85,479 + ABIE41_RS00480 0.39 -0.7 85,479 + ABIE41_RS00480 0.39 +2.2 85,479 + ABIE41_RS00480 0.39 +2.0 85,479 + ABIE41_RS00480 0.39 +1.2 85,480 - ABIE41_RS00480 0.39 -1.3 85,480 - ABIE41_RS00480 0.39 -0.0 85,480 - ABIE41_RS00480 0.39 +0.1 85,480 - ABIE41_RS00480 0.39 +2.5 85,480 - ABIE41_RS00480 0.39 -0.3 85,480 - ABIE41_RS00480 0.39 -1.7 85,586 + ABIE41_RS00480 0.58 -0.6 85,588 + ABIE41_RS00480 0.58 -1.6 85,588 + ABIE41_RS00480 0.58 +1.0 85,588 + ABIE41_RS00480 0.58 +0.7 85,588 + ABIE41_RS00480 0.58 +0.2 85,588 + ABIE41_RS00480 0.58 +0.4 85,588 + ABIE41_RS00480 0.58 +0.1 85,588 + ABIE41_RS00480 0.58 -0.0 85,588 + ABIE41_RS00480 0.58 +1.6 85,588 + ABIE41_RS00480 0.58 -0.4 85,588 + ABIE41_RS00480 0.58 +0.8 85,588 + ABIE41_RS00480 0.58 -2.1 85,589 - ABIE41_RS00480 0.58 +0.4 85,589 - ABIE41_RS00480 0.58 +0.3 85,589 - ABIE41_RS00480 0.58 +1.1 85,593 + ABIE41_RS00480 0.59 +0.2 85,593 + ABIE41_RS00480 0.59 -0.4 85,593 + ABIE41_RS00480 0.59 -1.1 85,594 - ABIE41_RS00480 0.59 -0.0 85,594 - ABIE41_RS00480 0.59 +0.1 85,594 - ABIE41_RS00480 0.59 -0.8 85,594 - ABIE41_RS00480 0.59 -0.2 85,594 - ABIE41_RS00480 0.59 +0.1 85,661 + ABIE41_RS00480 0.71 -1.2 85,661 + ABIE41_RS00480 0.71 +0.7 85,661 + ABIE41_RS00480 0.71 -0.8 85,661 + ABIE41_RS00480 0.71 +0.6 85,661 + ABIE41_RS00480 0.71 -0.7 85,661 + ABIE41_RS00480 0.71 -2.1 85,662 - ABIE41_RS00480 0.71 -0.4 85,662 - ABIE41_RS00480 0.71 -1.0 85,867 + ABIE41_RS00485 0.23 -0.1 85,867 + ABIE41_RS00485 0.23 +2.4 85,867 + ABIE41_RS00485 0.23 +2.5 85,868 - ABIE41_RS00485 0.23 +0.2 85,868 - ABIE41_RS00485 0.23 +0.7 85,868 - ABIE41_RS00485 0.23 +0.4 85,868 - ABIE41_RS00485 0.23 +0.3 85,969 + ABIE41_RS00485 0.46 +1.8 85,969 + ABIE41_RS00485 0.46 -0.2 85,969 + ABIE41_RS00485 0.46 +0.2 85,970 - ABIE41_RS00485 0.47 +0.6 85,970 - ABIE41_RS00485 0.47 -1.7 86,228 + -1.3 86,228 + +0.4 86,228 + +1.1 86,228 + -0.2 86,228 + -0.7 86,228 + +0.4 86,228 + +0.6 86,228 + -0.1 86,229 - -1.6 86,229 - -0.3 86,229 - +0.1 86,229 - -0.8 86,229 - -0.2 86,292 + -0.7 86,293 - -0.4 86,391 + ABIE41_RS00490 0.15 -0.5 86,391 + ABIE41_RS00490 0.15 +1.4 86,391 + ABIE41_RS00490 0.15 -0.1 86,392 - ABIE41_RS00490 0.15 +0.1 86,392 - ABIE41_RS00490 0.15 +0.5 86,393 + ABIE41_RS00490 0.15 -0.2 86,393 + ABIE41_RS00490 0.15 +0.1 86,393 + ABIE41_RS00490 0.15 +0.6 86,393 + ABIE41_RS00490 0.15 -0.4 86,393 + ABIE41_RS00490 0.15 -0.8 86,393 + ABIE41_RS00490 0.15 +0.8 86,393 + ABIE41_RS00490 0.15 +0.0 86,394 - ABIE41_RS00490 0.15 -0.2 86,394 - ABIE41_RS00490 0.15 +1.7 86,394 - ABIE41_RS00490 0.15 -0.8 86,394 - ABIE41_RS00490 0.15 +1.0 86,394 - ABIE41_RS00490 0.15 -0.5 86,394 - ABIE41_RS00490 0.15 -1.6 86,394 - ABIE41_RS00490 0.15 +0.6 86,981 + ABIE41_RS00490 0.69 +0.2 86,981 + ABIE41_RS00490 0.69 +0.2 86,981 + ABIE41_RS00490 0.69 -0.9 87,017 + ABIE41_RS00490 0.72 -0.1 87,017 + ABIE41_RS00490 0.72 +1.2 87,018 - ABIE41_RS00490 0.72 -0.5
Or see this region's nucleotide sequence