Experiment: R2A with 3-octanone 2.65516666666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS07900 and ABIE41_RS07905 are separated by 107 nucleotides ABIE41_RS07905 and ABIE41_RS07910 are separated by 54 nucleotides ABIE41_RS07910 and ABIE41_RS07915 are separated by 46 nucleotides
ABIE41_RS07900: ABIE41_RS07900 - F0F1 ATP synthase subunit beta, at 1,623,696 to 1,625,165
_RS07900
ABIE41_RS07905: ABIE41_RS07905 - F0F1 ATP synthase subunit epsilon, at 1,625,273 to 1,625,686
_RS07905
ABIE41_RS07910: ABIE41_RS07910 - VOC family protein, at 1,625,741 to 1,626,121
_RS07910
ABIE41_RS07915: ABIE41_RS07915 - bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA, at 1,626,168 to 1,629,260
_RS07915
Position (kb) 1625
1626 Strain fitness (log2 ratio) -1
0
1 at 1626.054 kb on + strand, within ABIE41_RS07910 at 1626.054 kb on + strand, within ABIE41_RS07910 at 1626.256 kb on + strand at 1626.256 kb on + strand at 1626.257 kb on - strand at 1626.257 kb on - strand at 1626.257 kb on - strand at 1626.352 kb on + strand at 1626.352 kb on + strand at 1626.352 kb on + strand at 1626.352 kb on + strand at 1626.353 kb on - strand at 1626.353 kb on - strand at 1626.353 kb on - strand at 1626.353 kb on - strand at 1626.353 kb on - strand at 1626.433 kb on + strand at 1626.433 kb on + strand at 1626.434 kb on - strand at 1626.568 kb on + strand, within ABIE41_RS07915 at 1626.568 kb on + strand, within ABIE41_RS07915 at 1626.568 kb on + strand, within ABIE41_RS07915 at 1626.569 kb on - strand, within ABIE41_RS07915 at 1626.569 kb on - strand, within ABIE41_RS07915 at 1626.569 kb on - strand, within ABIE41_RS07915 at 1626.569 kb on - strand, within ABIE41_RS07915 at 1626.569 kb on - strand, within ABIE41_RS07915 at 1626.569 kb on - strand, within ABIE41_RS07915
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with 3-octanone 2.65516666666667 mM remove 1,626,054 + ABIE41_RS07910 0.82 -0.6 1,626,054 + ABIE41_RS07910 0.82 -0.9 1,626,256 + +0.1 1,626,256 + -0.2 1,626,257 - +0.4 1,626,257 - -1.0 1,626,257 - -0.9 1,626,352 + -1.1 1,626,352 + -0.2 1,626,352 + +0.9 1,626,352 + +1.3 1,626,353 - -0.8 1,626,353 - -0.2 1,626,353 - +0.0 1,626,353 - +0.0 1,626,353 - +0.3 1,626,433 + -0.6 1,626,433 + -1.5 1,626,434 - -0.4 1,626,568 + ABIE41_RS07915 0.13 -0.6 1,626,568 + ABIE41_RS07915 0.13 +1.5 1,626,568 + ABIE41_RS07915 0.13 -0.2 1,626,569 - ABIE41_RS07915 0.13 -0.0 1,626,569 - ABIE41_RS07915 0.13 -0.3 1,626,569 - ABIE41_RS07915 0.13 +0.4 1,626,569 - ABIE41_RS07915 0.13 -0.9 1,626,569 - ABIE41_RS07915 0.13 +0.8 1,626,569 - ABIE41_RS07915 0.13 +0.2
Or see this region's nucleotide sequence