Strain Fitness in Pseudomonas sp. RS175 around PFR28_02973

Experiment: Xanthosine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xanthosine (C)
3,476,645	-				-1.0
3,476,932	+				-0.9
3,476,933	-				+1.2
3,476,968	+				-1.1
3,476,968	+				+0.2
3,476,968	+				-0.3
3,477,517	+		PFR28_02972	0.88	+0.1
3,477,517	+		PFR28_02972	0.88	-0.2
3,477,517	+		PFR28_02972	0.88	-0.0
3,477,517	+		PFR28_02972	0.88	-0.4
3,477,517	+		PFR28_02972	0.88	-0.0
3,477,518	-		PFR28_02972	0.88	-3.5
3,477,518	-		PFR28_02972	0.88	-1.2
3,477,518	-		PFR28_02972	0.88	+1.1
3,477,518	-		PFR28_02972	0.88	+1.1
3,477,518	-		PFR28_02972	0.88	+0.6
3,477,518	-		PFR28_02972	0.88	-2.9
3,477,521	+		PFR28_02972	0.88	-1.0
3,477,521	+		PFR28_02972	0.88	+0.2
3,477,521	+		PFR28_02972	0.88	+0.6
3,477,521	+		PFR28_02972	0.88	-1.5
3,477,522	-		PFR28_02972	0.89	-1.1
3,477,522	-		PFR28_02972	0.89	+0.9
3,477,522	-		PFR28_02972	0.89	+1.5
3,477,522	-		PFR28_02972	0.89	+0.1
3,477,522	-		PFR28_02972	0.89	+0.1
3,477,522	-		PFR28_02972	0.89	+0.6
3,477,522	-		PFR28_02972	0.89	-1.6
3,477,533	+				-1.7
3,477,533	+				-1.2
3,477,533	+				-0.6
3,477,534	-				-1.1
3,477,534	-				+2.2
3,477,544	+				-0.2
3,477,545	-				+0.8
3,477,748	-				-2.0
3,477,750	+				-2.8
3,477,750	+				+0.0
3,477,750	+				-2.4
3,477,751	-				-2.5
3,477,751	-				-0.1
3,477,816	+		PFR28_02973	0.14	+0.1
3,477,935	+		PFR28_02973	0.22	+0.4
3,477,948	+		PFR28_02973	0.23	-1.0
3,477,949	-		PFR28_02973	0.23	-0.6
3,477,950	+		PFR28_02973	0.23	-1.3
3,477,950	+		PFR28_02973	0.23	-1.5
3,477,950	+		PFR28_02973	0.23	-1.4
3,477,950	+		PFR28_02973	0.23	-0.5
3,477,950	+		PFR28_02973	0.23	+0.9
3,477,950	+		PFR28_02973	0.23	-1.3
3,477,950	+		PFR28_02973	0.23	-0.7
3,477,951	-		PFR28_02973	0.23	-1.7
3,477,951	-		PFR28_02973	0.23	+0.8
3,477,951	-		PFR28_02973	0.23	-2.1
3,477,968	+		PFR28_02973	0.24	-1.4
3,477,986	+		PFR28_02973	0.26	-0.8
3,477,987	-		PFR28_02973	0.26	-0.6
3,478,130	+		PFR28_02973	0.36	-0.4
3,478,130	+		PFR28_02973	0.36	+0.8
3,478,130	+		PFR28_02973	0.36	-2.6
3,478,130	+		PFR28_02973	0.36	+1.3
3,478,130	+		PFR28_02973	0.36	-2.4
3,478,130	+		PFR28_02973	0.36	-2.6
3,478,130	+		PFR28_02973	0.36	+0.2
3,478,130	+		PFR28_02973	0.36	+0.3
3,478,131	-		PFR28_02973	0.36	-0.9
3,478,131	-		PFR28_02973	0.36	+0.4
3,478,131	-		PFR28_02973	0.36	-0.5
3,478,131	-		PFR28_02973	0.36	-3.4
3,478,131	-		PFR28_02973	0.36	+0.4
3,478,131	-		PFR28_02973	0.36	-0.7
3,478,131	-		PFR28_02973	0.36	-0.0
3,478,154	+		PFR28_02973	0.37	-1.7
3,478,154	+		PFR28_02973	0.37	+0.6
3,478,154	+		PFR28_02973	0.37	+0.3
3,478,154	+		PFR28_02973	0.37	+0.6
3,478,155	-		PFR28_02973	0.37	-0.9
3,478,155	-		PFR28_02973	0.37	-2.9
3,478,155	-		PFR28_02973	0.37	+1.3
3,478,155	-		PFR28_02973	0.37	-1.2
3,478,202	+		PFR28_02973	0.41	-1.2
3,478,202	+		PFR28_02973	0.41	+0.9
3,478,202	+		PFR28_02973	0.41	+2.2
3,478,202	+		PFR28_02973	0.41	-1.6
3,478,202	+		PFR28_02973	0.41	+0.6
3,478,202	+		PFR28_02973	0.41	-0.6
3,478,202	+		PFR28_02973	0.41	-1.4
3,478,203	-		PFR28_02973	0.41	-0.0
3,478,203	-		PFR28_02973	0.41	+0.6
3,478,203	-		PFR28_02973	0.41	+1.2
3,478,203	-		PFR28_02973	0.41	-0.4
3,478,203	-		PFR28_02973	0.41	-2.0
3,478,203	-		PFR28_02973	0.41	-0.5
3,478,203	-		PFR28_02973	0.41	+1.6
3,478,203	-		PFR28_02973	0.41	+0.2
3,478,206	+		PFR28_02973	0.41	+0.2
3,478,206	+		PFR28_02973	0.41	+0.2
3,478,206	+		PFR28_02973	0.41	-0.9
3,478,206	+		PFR28_02973	0.41	-2.9
3,478,206	+		PFR28_02973	0.41	-1.3
3,478,206	+		PFR28_02973	0.41	-1.4
3,478,207	-		PFR28_02973	0.41	+0.5
3,478,207	-		PFR28_02973	0.41	+0.1
3,478,207	-		PFR28_02973	0.41	+2.0
3,478,207	-		PFR28_02973	0.41	-0.5
3,478,207	-		PFR28_02973	0.41	-0.4
3,478,316	-		PFR28_02973	0.49	-2.2
3,478,442	+		PFR28_02973	0.57	+2.8
3,478,442	+		PFR28_02973	0.57	-0.1
3,478,442	+		PFR28_02973	0.57	+0.3
3,478,442	+		PFR28_02973	0.57	-0.6
3,478,442	+		PFR28_02973	0.57	-3.4
3,478,442	+		PFR28_02973	0.57	-0.6
3,478,442	+		PFR28_02973	0.57	-1.6
3,478,442	+		PFR28_02973	0.57	-0.1
3,478,443	-		PFR28_02973	0.57	-1.8
3,478,443	-		PFR28_02973	0.57	+0.3
3,478,443	-		PFR28_02973	0.57	-0.1
3,478,443	-		PFR28_02973	0.57	-0.2
3,478,443	-		PFR28_02973	0.57	+1.6
3,478,443	-		PFR28_02973	0.57	-1.2
3,478,443	-		PFR28_02973	0.57	+0.9
3,478,445	+		PFR28_02973	0.57	-0.0
3,478,445	+		PFR28_02973	0.57	-0.2
3,478,445	+		PFR28_02973	0.57	-0.2
3,478,445	+		PFR28_02973	0.57	-2.6
3,478,445	+		PFR28_02973	0.57	+0.1
3,478,445	+		PFR28_02973	0.57	-0.6
3,478,445	+		PFR28_02973	0.57	-1.5
3,478,445	+		PFR28_02973	0.57	-0.9
3,478,445	+		PFR28_02973	0.57	-0.7
3,478,445	+		PFR28_02973	0.57	+1.4
3,478,445	+		PFR28_02973	0.57	-0.1
3,478,445	+		PFR28_02973	0.57	+1.2
3,478,445	+		PFR28_02973	0.57	-2.9
3,478,445	+		PFR28_02973	0.57	-1.0
3,478,446	-		PFR28_02973	0.58	-1.4
3,478,446	-		PFR28_02973	0.58	-1.2
3,478,446	-		PFR28_02973	0.58	+0.5
3,478,446	-		PFR28_02973	0.58	-0.6
3,478,446	-		PFR28_02973	0.58	+0.2
3,478,446	-		PFR28_02973	0.58	-2.2
3,478,446	-		PFR28_02973	0.58	-0.1
3,478,446	-		PFR28_02973	0.58	-1.6
3,478,446	-		PFR28_02973	0.58	-1.6
3,478,446	-		PFR28_02973	0.58	+0.3
3,478,446	-		PFR28_02973	0.58	+0.4
3,478,489	+		PFR28_02973	0.60	+0.1
3,478,625	+		PFR28_02973	0.70	-0.5
3,478,625	+		PFR28_02973	0.70	+0.6
3,478,625	+		PFR28_02973	0.70	-0.2
3,478,625	+		PFR28_02973	0.70	+0.5
3,478,626	-		PFR28_02973	0.70	-1.7
3,478,626	-		PFR28_02973	0.70	+1.2
3,478,626	-		PFR28_02973	0.70	+1.7
3,478,626	-		PFR28_02973	0.70	+0.6
3,478,626	-		PFR28_02973	0.70	+0.8
3,478,697	+		PFR28_02973	0.75	+0.3
3,478,698	-		PFR28_02973	0.75	-0.8
3,478,698	-		PFR28_02973	0.75	-2.5
3,478,813	+		PFR28_02973	0.83	-1.4
3,478,813	+		PFR28_02973	0.83	+0.6
3,478,814	-		PFR28_02973	0.83	-2.9
3,478,814	-		PFR28_02973	0.83	+0.9
3,478,814	-		PFR28_02973	0.83	+0.6
3,478,814	-		PFR28_02973	0.83	-2.3
3,478,814	-		PFR28_02973	0.83	+0.6
3,478,815	+		PFR28_02973	0.83	-1.6
3,478,856	+		PFR28_02973	0.86	-0.8
3,478,856	+		PFR28_02973	0.86	-0.2
3,478,856	+		PFR28_02973	0.86	-0.6
3,478,856	+		PFR28_02973	0.86	+2.2
3,478,856	+		PFR28_02973	0.86	-1.9
3,478,856	+		PFR28_02973	0.86	-0.1
3,478,856	+		PFR28_02973	0.86	-1.3
3,478,857	-		PFR28_02973	0.86	-3.1
3,478,857	-		PFR28_02973	0.86	-1.5
3,478,857	-		PFR28_02973	0.86	+0.2
3,478,857	-		PFR28_02973	0.86	-0.4
3,478,857	-		PFR28_02973	0.86	-0.7
3,478,857	-		PFR28_02973	0.86	-0.8
3,478,859	+		PFR28_02973	0.86	-1.9
3,478,859	+		PFR28_02973	0.86	+0.3
3,478,860	-		PFR28_02973	0.86	+0.9
3,478,860	-		PFR28_02973	0.86	-0.2
3,478,910	+		PFR28_02973	0.90	+0.4
3,478,911	-		PFR28_02973	0.90	-0.6
3,478,991	+				-1.2
3,478,991	+				+3.2
3,479,031	+				+0.9
3,479,031	+				-1.5
3,479,031	+				+1.7
3,479,031	+				-0.0
3,479,031	+				-0.1
3,479,031	+				+0.0
3,479,032	-				+0.9
3,479,032	-				-0.3
3,479,032	-				-0.4
3,479,032	-				-0.5
3,479,032	-				-0.2
3,479,032	-				-0.5
3,479,032	-				+3.5
3,479,039	+				+0.4
3,479,040	-				+0.6
3,479,088	-				-0.3
3,479,119	-				-0.4
3,479,126	+				+1.5
3,479,156	+				+1.1
3,479,157	-				+0.3
3,479,371	-		PFR28_02974	0.14	-0.4
3,479,371	-		PFR28_02974	0.14	+2.2
3,479,488	+		PFR28_02974	0.28	+2.2
3,479,488	+		PFR28_02974	0.28	+0.9
3,479,488	+		PFR28_02974	0.28	-0.7
3,479,489	-		PFR28_02974	0.29	-0.1
3,479,489	-		PFR28_02974	0.29	+2.5
3,479,489	-		PFR28_02974	0.29	-3.3
3,479,489	-		PFR28_02974	0.29	+2.2
3,479,490	+		PFR28_02974	0.29	+0.4
3,479,491	-		PFR28_02974	0.29	-0.9
3,479,553	-		PFR28_02974	0.36	-2.5
3,479,824	-		PFR28_02974	0.70	+0.6
3,479,859	+		PFR28_02974	0.74	+1.2
3,479,860	-		PFR28_02974	0.74	+0.2
3,479,860	-		PFR28_02974	0.74	-0.3
3,479,860	-		PFR28_02974	0.74	+0.0
3,479,860	-		PFR28_02974	0.74	+1.5
3,479,904	-		PFR28_02974	0.80	+0.0
3,480,012	+				+1.0
3,480,012	+				+0.3
3,480,012	+				-0.8
3,480,013	-				+2.8
3,480,013	-				+0.8