Experiment: R2A with 3-octanone 2.65516666666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS11755 and ABIE41_RS11760 are separated by 44 nucleotides ABIE41_RS11760 and ABIE41_RS11765 are separated by 7 nucleotides ABIE41_RS11765 and ABIE41_RS11770 are separated by 227 nucleotides
ABIE41_RS11755: ABIE41_RS11755 - tRNA (guanosine(37)-N1)-methyltransferase TrmD, at 2,409,410 to 2,410,105
_RS11755
ABIE41_RS11760: ABIE41_RS11760 - rhodanese-like domain-containing protein, at 2,410,150 to 2,410,572
_RS11760
ABIE41_RS11765: ABIE41_RS11765 - pyridoxal phosphate-dependent aminotransferase, at 2,410,580 to 2,411,782
_RS11765
ABIE41_RS11770: ABIE41_RS11770 - transglutaminase family protein, at 2,412,010 to 2,412,822
_RS11770
Position (kb)
2410
2411
2412 Strain fitness (log2 ratio)
-2
-1
0
1 at 2410.157 kb on + strand at 2410.463 kb on + strand, within ABIE41_RS11760 at 2410.463 kb on + strand, within ABIE41_RS11760 at 2412.029 kb on - strand at 2412.040 kb on + strand at 2412.123 kb on + strand, within ABIE41_RS11770 at 2412.124 kb on - strand, within ABIE41_RS11770 at 2412.210 kb on + strand, within ABIE41_RS11770 at 2412.210 kb on + strand, within ABIE41_RS11770 at 2412.211 kb on - strand, within ABIE41_RS11770 at 2412.387 kb on + strand, within ABIE41_RS11770 at 2412.388 kb on - strand, within ABIE41_RS11770 at 2412.388 kb on - strand, within ABIE41_RS11770 at 2412.454 kb on + strand, within ABIE41_RS11770 at 2412.454 kb on + strand, within ABIE41_RS11770 at 2412.455 kb on - strand, within ABIE41_RS11770 at 2412.455 kb on - strand, within ABIE41_RS11770 at 2412.455 kb on - strand, within ABIE41_RS11770 at 2412.586 kb on + strand, within ABIE41_RS11770 at 2412.586 kb on + strand, within ABIE41_RS11770 at 2412.587 kb on - strand, within ABIE41_RS11770 at 2412.652 kb on + strand, within ABIE41_RS11770 at 2412.652 kb on + strand, within ABIE41_RS11770 at 2412.652 kb on + strand, within ABIE41_RS11770 at 2412.653 kb on - strand, within ABIE41_RS11770
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with 3-octanone 2.65516666666667 mM remove 2,410,157 + -0.3 2,410,463 + ABIE41_RS11760 0.74 +0.3 2,410,463 + ABIE41_RS11760 0.74 +1.4 2,412,029 - -0.1 2,412,040 + +0.9 2,412,123 + ABIE41_RS11770 0.14 -0.3 2,412,124 - ABIE41_RS11770 0.14 +0.1 2,412,210 + ABIE41_RS11770 0.25 -0.6 2,412,210 + ABIE41_RS11770 0.25 +0.1 2,412,211 - ABIE41_RS11770 0.25 +0.5 2,412,387 + ABIE41_RS11770 0.46 -0.4 2,412,388 - ABIE41_RS11770 0.46 +0.2 2,412,388 - ABIE41_RS11770 0.46 +0.6 2,412,454 + ABIE41_RS11770 0.55 +0.6 2,412,454 + ABIE41_RS11770 0.55 +0.5 2,412,455 - ABIE41_RS11770 0.55 +1.5 2,412,455 - ABIE41_RS11770 0.55 -0.7 2,412,455 - ABIE41_RS11770 0.55 +0.1 2,412,586 + ABIE41_RS11770 0.71 +0.3 2,412,586 + ABIE41_RS11770 0.71 -1.9 2,412,587 - ABIE41_RS11770 0.71 +0.4 2,412,652 + ABIE41_RS11770 0.79 -0.3 2,412,652 + ABIE41_RS11770 0.79 -1.0 2,412,652 + ABIE41_RS11770 0.79 +1.1 2,412,653 - ABIE41_RS11770 0.79 -2.1
Or see this region's nucleotide sequence