Strain Fitness in Pseudomonas sp. RS175 around PFR28_04485

Experiment: pyruvate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pyruvate (C)
5,109,431	+		PFR28_04484	0.21	+0.2
5,109,431	+		PFR28_04484	0.21	-0.3
5,110,122	+				+0.6
5,110,122	+				-0.6
5,110,122	+				+0.2
5,110,123	-				-1.3
5,110,192	+				-0.2
5,110,192	+				+0.2
5,110,193	-				-0.1
5,110,212	+				-0.5
5,110,231	+				+0.3
5,110,231	+				-0.1
5,110,232	-				+0.3
5,110,232	-				-0.7
5,110,240	+				+1.1
5,110,252	-				+0.2
5,110,368	+				+1.1
5,110,368	+				+0.0
5,110,368	+				-0.5
5,110,368	+				-1.0
5,110,368	+				-0.8
5,110,368	+				-0.3
5,110,368	+				+0.1
5,110,368	+				-0.4
5,110,369	-				+0.1
5,110,369	-				+1.8
5,110,369	-				+0.6
5,110,369	-				+0.2
5,110,369	-				-0.8
5,110,369	-				-1.3
5,110,369	-				-0.6
5,110,369	-				-0.8
5,110,372	+				-1.7
5,110,372	+				-2.1
5,110,372	+				-0.7
5,110,372	+				-0.4
5,110,372	+				-2.5
5,110,373	-				+0.1
5,110,373	-				-0.1
5,110,373	-				-1.7
5,110,373	-				-1.3
5,110,457	+		PFR28_04485	0.12	-0.1
5,110,458	-		PFR28_04485	0.12	-1.2
5,110,479	+		PFR28_04485	0.15	-0.1
5,110,479	+		PFR28_04485	0.15	-0.1
5,110,479	+		PFR28_04485	0.15	-0.9
5,110,480	-		PFR28_04485	0.15	+0.2
5,110,480	-		PFR28_04485	0.15	+0.5
5,110,480	-		PFR28_04485	0.15	-0.1
5,111,108	-				-0.5
5,111,180	+				+0.6
5,111,180	+				-0.9
5,111,180	+				-0.0
5,111,180	+				+0.5
5,111,181	-				-0.5
5,111,181	-				-2.5
5,111,181	-				-1.4
5,111,181	-				+0.6
5,111,181	-				-0.9
5,111,181	-				-1.2
5,111,181	-				+0.0
5,111,240	-				-1.4
5,111,246	-				-1.4
5,111,261	-				+0.5
5,111,335	+		PFR28_04486	0.12	-2.8
5,111,335	+		PFR28_04486	0.12	-0.2
5,111,335	+		PFR28_04486	0.12	-0.2
5,111,335	+		PFR28_04486	0.12	-0.3
5,111,335	+		PFR28_04486	0.12	-0.1
5,111,335	+		PFR28_04486	0.12	-2.3
5,111,335	+		PFR28_04486	0.12	+0.6
5,111,335	+		PFR28_04486	0.12	+0.6
5,111,335	+		PFR28_04486	0.12	-1.1
5,111,335	+		PFR28_04486	0.12	+0.5
5,111,335	+		PFR28_04486	0.12	+0.6
5,111,335	+		PFR28_04486	0.12	+0.1
5,111,335	+		PFR28_04486	0.12	-1.2
5,111,335	+		PFR28_04486	0.12	-1.4
5,111,335	+		PFR28_04486	0.12	-0.0
5,111,335	+		PFR28_04486	0.12	+0.3
5,111,335	+		PFR28_04486	0.12	-0.3
5,111,335	+		PFR28_04486	0.12	-1.7
5,111,335	+		PFR28_04486	0.12	-2.8
5,111,335	+		PFR28_04486	0.12	-2.8
5,111,335	+		PFR28_04486	0.12	+0.6
5,111,335	+		PFR28_04486	0.12	-0.1
5,111,336	-		PFR28_04486	0.12	-1.7
5,111,336	-		PFR28_04486	0.12	-0.2
5,111,336	-		PFR28_04486	0.12	-0.7
5,111,336	-		PFR28_04486	0.12	-0.3
5,111,336	-		PFR28_04486	0.12	-1.9
5,111,336	-		PFR28_04486	0.12	-0.7
5,111,336	-		PFR28_04486	0.12	-2.8
5,111,336	-		PFR28_04486	0.12	-2.8
5,111,336	-		PFR28_04486	0.12	+0.1
5,111,336	-		PFR28_04486	0.12	-0.5
5,111,336	-		PFR28_04486	0.12	-0.4
5,111,336	-		PFR28_04486	0.12	+0.3
5,111,336	-		PFR28_04486	0.12	-0.2
5,111,336	-		PFR28_04486	0.12	-0.2
5,111,336	-		PFR28_04486	0.12	+1.1
5,111,336	-		PFR28_04486	0.12	-1.2
5,111,336	-		PFR28_04486	0.12	+0.1
5,111,336	-		PFR28_04486	0.12	+0.5
5,111,336	-		PFR28_04486	0.12	-1.2
5,111,350	+		PFR28_04486	0.13	+1.6
5,111,350	+		PFR28_04486	0.13	+0.0
5,111,351	-		PFR28_04486	0.14	+0.7
5,111,422	+		PFR28_04486	0.22	-0.3
5,111,422	+		PFR28_04486	0.22	+0.8
5,111,423	-		PFR28_04486	0.22	+1.5
5,111,423	-		PFR28_04486	0.22	-0.5
5,111,490	+		PFR28_04486	0.30	+0.7
5,111,490	+		PFR28_04486	0.30	+0.1
5,111,490	+		PFR28_04486	0.30	-1.5
5,111,490	+		PFR28_04486	0.30	-0.4
5,111,490	+		PFR28_04486	0.30	-0.1
5,111,491	-		PFR28_04486	0.30	+0.2
5,111,637	+		PFR28_04486	0.48	-2.3
5,111,638	-		PFR28_04486	0.48	+0.9
5,111,689	+		PFR28_04486	0.54	-2.4
5,111,689	+		PFR28_04486	0.54	+0.2
5,111,689	+		PFR28_04486	0.54	-0.9
5,111,689	+		PFR28_04486	0.54	+0.9
5,111,690	-		PFR28_04486	0.54	-0.7
5,111,773	+		PFR28_04486	0.64	-0.9
5,111,774	-		PFR28_04486	0.64	+0.2
5,111,774	-		PFR28_04486	0.64	-0.0
5,111,774	-		PFR28_04486	0.64	-1.1
5,111,788	+		PFR28_04486	0.66	-0.9
5,111,933	-		PFR28_04486	0.83	-1.4
5,111,933	-		PFR28_04486	0.83	+0.4
5,111,953	+		PFR28_04486	0.86	-2.1
5,111,954	-		PFR28_04486	0.86	+0.8
5,111,954	-		PFR28_04486	0.86	+2.0
5,112,053	+				-0.9
5,112,053	+				+0.5
5,112,053	+				-0.6
5,112,053	+				-0.8
5,112,053	+				-0.8
5,112,053	+				-1.5
5,112,053	+				-1.5
5,112,053	+				-0.3
5,112,053	+				-1.7
5,112,053	+				-1.1
5,112,053	+				-1.5
5,112,053	+				-3.3
5,112,053	+				-0.7
5,112,053	+				+0.6
5,112,053	+				-0.7
5,112,053	+				+1.0
5,112,053	+				-0.4
5,112,053	+				+0.0
5,112,053	+				-1.1
5,112,053	+				+0.7
5,112,053	+				-0.5
5,112,054	-				-0.4
5,112,054	-				-0.2
5,112,054	-				+0.1
5,112,054	-				+0.4
5,112,054	-				-0.4
5,112,054	-				-0.5
5,112,054	-				-0.4
5,112,054	-				-0.8
5,112,054	-				-0.3
5,112,054	-				-0.9
5,112,054	-				+0.3
5,112,054	-				-0.9
5,112,054	-				+1.1
5,112,054	-				+1.0
5,112,054	-				-0.6
5,112,054	-				-0.6
5,112,054	-				-1.2
5,112,054	-				-2.5
5,112,054	-				+0.7
5,112,054	-				-1.3
5,112,088	+				-0.4