Strain Fitness in Pseudomonas sp. RS175 around PFR28_04030

Experiment: pyruvate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pyruvate (C)
4,605,013	+				+1.4
4,605,016	-				+0.6
4,605,021	-				+0.9
4,605,029	-				-0.6
4,605,085	+				+1.9
4,605,085	+				-0.9
4,605,085	+				+0.7
4,605,086	-				-0.6
4,605,086	-				-1.4
4,605,086	-				-0.9
4,605,086	-				-0.6
4,605,086	-				-3.1
4,605,107	+				-1.5
4,605,108	-				-2.3
4,605,108	-				-1.5
4,605,108	-				-1.0
4,605,124	-				-2.3
4,605,171	-				-3.8
4,605,187	+				-2.2
4,605,621	-		PFR28_04030	0.38	-2.5
4,605,645	+		PFR28_04030	0.39	+0.4
4,605,645	+		PFR28_04030	0.39	-1.8
4,605,646	-		PFR28_04030	0.39	-2.7
4,605,646	-		PFR28_04030	0.39	-2.5
4,605,662	+		PFR28_04030	0.40	+0.4
4,605,675	-		PFR28_04030	0.41	-3.2
4,605,679	+		PFR28_04030	0.42	-0.6
4,605,680	-		PFR28_04030	0.42	-3.3
4,605,690	+		PFR28_04030	0.42	-0.6
4,605,691	-		PFR28_04030	0.42	-3.0
4,605,710	+		PFR28_04030	0.44	+1.4
4,605,710	+		PFR28_04030	0.44	+0.6
4,605,710	+		PFR28_04030	0.44	-1.0
4,605,710	+		PFR28_04030	0.44	-0.6
4,605,710	+		PFR28_04030	0.44	+1.4
4,605,710	+		PFR28_04030	0.44	-0.2
4,605,710	+		PFR28_04030	0.44	-0.6
4,605,710	+		PFR28_04030	0.44	+0.4
4,605,710	+		PFR28_04030	0.44	+0.4
4,605,710	+		PFR28_04030	0.44	+1.0
4,605,710	+		PFR28_04030	0.44	-2.6
4,605,710	+		PFR28_04030	0.44	+1.4
4,605,710	+		PFR28_04030	0.44	-1.3
4,605,711	-		PFR28_04030	0.44	-0.6
4,605,711	-		PFR28_04030	0.44	-1.8
4,605,711	-		PFR28_04030	0.44	-1.0
4,605,711	-		PFR28_04030	0.44	-1.8
4,605,711	-		PFR28_04030	0.44	-2.1
4,605,711	-		PFR28_04030	0.44	-2.2
4,605,711	-		PFR28_04030	0.44	-1.8
4,605,718	+		PFR28_04030	0.44	-0.6
4,605,752	+		PFR28_04030	0.47	-0.2
4,605,752	+		PFR28_04030	0.47	+0.4
4,605,753	-		PFR28_04030	0.47	-1.2
4,605,753	-		PFR28_04030	0.47	-2.2
4,605,753	-		PFR28_04030	0.47	-1.8
4,605,778	+		PFR28_04030	0.49	-1.2
4,605,778	+		PFR28_04030	0.49	+0.4
4,605,779	-		PFR28_04030	0.49	-1.2
4,605,779	-		PFR28_04030	0.49	-2.2
4,605,779	-		PFR28_04030	0.49	-1.4
4,605,840	+		PFR28_04030	0.53	-1.4
4,605,840	+		PFR28_04030	0.53	-2.0
4,605,840	+		PFR28_04030	0.53	-1.8
4,605,840	+		PFR28_04030	0.53	+1.4
4,605,840	+		PFR28_04030	0.53	-0.6
4,605,840	+		PFR28_04030	0.53	-3.3
4,605,841	-		PFR28_04030	0.53	-2.0
4,605,841	-		PFR28_04030	0.53	-0.7
4,605,841	-		PFR28_04030	0.53	-1.8
4,605,841	-		PFR28_04030	0.53	-0.6
4,605,921	+		PFR28_04030	0.59	-2.3
4,605,921	+		PFR28_04030	0.59	-2.9
4,605,921	+		PFR28_04030	0.59	-0.9
4,605,921	+		PFR28_04030	0.59	+1.4
4,605,921	+		PFR28_04030	0.59	-1.8
4,605,921	+		PFR28_04030	0.59	-1.8
4,605,921	+		PFR28_04030	0.59	+0.4
4,605,921	+		PFR28_04030	0.59	-1.0
4,605,922	-		PFR28_04030	0.59	-2.9
4,605,922	-		PFR28_04030	0.59	-1.4
4,605,922	-		PFR28_04030	0.59	-3.6
4,605,922	-		PFR28_04030	0.59	-2.3
4,605,963	+		PFR28_04030	0.62	+0.2
4,605,963	+		PFR28_04030	0.62	-3.0
4,605,963	+		PFR28_04030	0.62	+0.4
4,605,964	-		PFR28_04030	0.62	-3.5
4,605,964	-		PFR28_04030	0.62	-2.4
4,605,966	+		PFR28_04030	0.62	-2.3
4,605,966	+		PFR28_04030	0.62	-2.8
4,605,966	+		PFR28_04030	0.62	-1.4
4,605,966	+		PFR28_04030	0.62	-0.2
4,605,966	+		PFR28_04030	0.62	-0.2
4,605,966	+		PFR28_04030	0.62	-1.0
4,605,966	+		PFR28_04030	0.62	-1.0
4,605,966	+		PFR28_04030	0.62	-2.2
4,605,967	-		PFR28_04030	0.62	-0.5
4,605,967	-		PFR28_04030	0.62	-4.2
4,605,967	-		PFR28_04030	0.62	-2.3
4,605,967	-		PFR28_04030	0.62	-1.2
4,605,967	-		PFR28_04030	0.62	-4.1
4,605,967	-		PFR28_04030	0.62	-1.2
4,605,967	-		PFR28_04030	0.62	-2.1
4,605,967	-		PFR28_04030	0.62	-3.4
4,606,088	+		PFR28_04030	0.70	-2.1
4,606,088	+		PFR28_04030	0.70	-2.3
4,606,089	-		PFR28_04030	0.71	-3.4
4,606,101	+		PFR28_04030	0.71	-2.4
4,606,208	+		PFR28_04030	0.79	+0.4
4,606,208	+		PFR28_04030	0.79	-2.4
4,606,209	-		PFR28_04030	0.79	-3.1
4,606,209	-		PFR28_04030	0.79	-1.2
4,606,209	-		PFR28_04030	0.79	-1.4
4,606,209	-		PFR28_04030	0.79	-1.2
4,606,209	-		PFR28_04030	0.79	-1.0
4,606,212	+		PFR28_04030	0.79	+2.0
4,606,212	+		PFR28_04030	0.79	-1.6
4,606,212	+		PFR28_04030	0.79	+0.4
4,606,213	-		PFR28_04030	0.79	-0.2
4,606,217	+		PFR28_04030	0.80	-0.6
4,606,217	+		PFR28_04030	0.80	-2.4
4,606,217	+		PFR28_04030	0.80	-0.2
4,606,218	-		PFR28_04030	0.80	-0.2
4,606,224	+		PFR28_04030	0.80	+0.4
4,606,224	+		PFR28_04030	0.80	-0.6
4,606,224	+		PFR28_04030	0.80	-0.2
4,606,224	+		PFR28_04030	0.80	+0.4
4,606,225	-		PFR28_04030	0.80	-4.3
4,606,225	-		PFR28_04030	0.80	-0.6
4,606,296	+		PFR28_04030	0.85	+1.4
4,606,296	+		PFR28_04030	0.85	-0.2
4,606,297	-		PFR28_04030	0.85	-3.6
4,606,338	+		PFR28_04030	0.88	-3.1
4,606,338	+		PFR28_04030	0.88	+1.0
4,606,338	+		PFR28_04030	0.88	-1.4
4,606,338	+		PFR28_04030	0.88	-1.6
4,606,338	+		PFR28_04030	0.88	-2.4
4,606,339	-		PFR28_04030	0.88	-1.2
4,606,339	-		PFR28_04030	0.88	-1.2
4,606,339	-		PFR28_04030	0.88	-1.2
4,606,339	-		PFR28_04030	0.88	-2.5
4,606,339	-		PFR28_04030	0.88	-3.3
4,606,339	-		PFR28_04030	0.88	-3.4
4,606,391	+				-2.0
4,606,392	-				-2.1
4,606,518	+				+0.2
4,606,518	+				-2.1
4,606,518	+				+1.3
4,606,518	+				+0.7
4,606,518	+				+1.4
4,606,518	+				+1.4
4,606,518	+				+1.4
4,606,518	+				+1.4
4,606,518	+				+0.9
4,606,518	+				-0.7
4,606,518	+				-0.3
4,606,518	+				-0.5
4,606,518	+				+2.1
4,606,519	-				+2.0
4,606,519	-				+0.7
4,606,519	-				+0.2
4,606,519	-				+0.9
4,606,519	-				+1.4
4,606,519	-				+0.5
4,606,608	+				+2.7
4,606,608	+				+0.4
4,606,608	+				+0.8
4,606,608	+				+1.2
4,606,608	+				+0.8
4,606,608	+				+0.9
4,606,608	+				+2.4
4,606,608	+				+2.4
4,606,608	+				+1.4
4,606,608	+				+0.4
4,606,609	-				+1.8
4,606,609	-				+2.1
4,606,609	-				+1.8
4,606,609	-				+1.5
4,606,609	-				+1.8
4,606,609	-				+1.1
4,606,609	-				+0.8
4,606,609	-				+1.0
4,606,676	-		PFR28_04031	0.15	+0.4
4,606,708	+		PFR28_04031	0.18	+1.5
4,606,709	-		PFR28_04031	0.18	+1.6
4,606,771	+		PFR28_04031	0.24	+1.4
4,606,771	+		PFR28_04031	0.24	+2.9
4,606,771	+		PFR28_04031	0.24	-0.8
4,606,771	+		PFR28_04031	0.24	+0.4
4,606,771	+		PFR28_04031	0.24	+1.0
4,606,771	+		PFR28_04031	0.24	-0.3
4,606,771	+		PFR28_04031	0.24	+0.9
4,606,771	+		PFR28_04031	0.24	+0.9
4,606,771	+		PFR28_04031	0.24	+1.0
4,606,771	+		PFR28_04031	0.24	+1.2
4,606,771	+		PFR28_04031	0.24	+1.1
4,606,771	+		PFR28_04031	0.24	+1.0
4,606,771	+		PFR28_04031	0.24	+0.9
4,606,771	+		PFR28_04031	0.24	+1.4
4,606,772	-		PFR28_04031	0.24	+1.2
4,606,772	-		PFR28_04031	0.24	+1.0
4,606,772	-		PFR28_04031	0.24	+0.8
4,606,772	-		PFR28_04031	0.24	+1.4
4,606,772	-		PFR28_04031	0.24	+0.8
4,606,772	-		PFR28_04031	0.24	+1.5
4,606,772	-		PFR28_04031	0.24	+0.8
4,606,772	-		PFR28_04031	0.24	+0.6
4,606,772	-		PFR28_04031	0.24	+2.1
4,606,831	+		PFR28_04031	0.29	+1.2
4,606,874	+		PFR28_04031	0.33	+0.8
4,606,875	-		PFR28_04031	0.34	+1.3
4,606,875	-		PFR28_04031	0.34	+1.1
4,606,875	-		PFR28_04031	0.34	-1.6
4,606,875	-		PFR28_04031	0.34	+1.7
4,606,875	-		PFR28_04031	0.34	+1.9
4,606,907	-		PFR28_04031	0.36	+1.4
4,606,957	+		PFR28_04031	0.41	+0.3
4,606,957	+		PFR28_04031	0.41	+0.7
4,607,023	+		PFR28_04031	0.47	-0.0
4,607,023	+		PFR28_04031	0.47	+1.3
4,607,023	+		PFR28_04031	0.47	+2.0
4,607,023	+		PFR28_04031	0.47	+1.9
4,607,023	+		PFR28_04031	0.47	+0.8
4,607,023	+		PFR28_04031	0.47	+0.5
4,607,023	+		PFR28_04031	0.47	+1.5
4,607,024	-		PFR28_04031	0.47	+0.7
4,607,024	-		PFR28_04031	0.47	+1.5
4,607,024	-		PFR28_04031	0.47	+0.7
4,607,161	+		PFR28_04031	0.60	+1.6
4,607,162	-		PFR28_04031	0.60	+0.2
4,607,214	-		PFR28_04031	0.65	+1.0
4,607,227	+		PFR28_04031	0.66	+1.7
4,607,227	+		PFR28_04031	0.66	+0.9
4,607,227	+		PFR28_04031	0.66	+1.4
4,607,227	+		PFR28_04031	0.66	+1.3
4,607,228	-		PFR28_04031	0.66	+1.0
4,607,266	+		PFR28_04031	0.69	+1.4
4,607,266	+		PFR28_04031	0.69	+1.0
4,607,266	+		PFR28_04031	0.69	+0.9
4,607,267	-		PFR28_04031	0.69	+0.9
4,607,267	-		PFR28_04031	0.69	+1.8
4,607,267	-		PFR28_04031	0.69	-0.4
4,607,374	+		PFR28_04031	0.79	+0.7
4,607,374	+		PFR28_04031	0.79	+0.7
4,607,374	+		PFR28_04031	0.79	+0.4
4,607,374	+		PFR28_04031	0.79	+0.4
4,607,374	+		PFR28_04031	0.79	+3.0
4,607,374	+		PFR28_04031	0.79	+1.8
4,607,374	+		PFR28_04031	0.79	+0.8
4,607,374	+		PFR28_04031	0.79	+3.2
4,607,374	+		PFR28_04031	0.79	+2.0
4,607,375	-		PFR28_04031	0.79	+1.5
4,607,375	-		PFR28_04031	0.79	+1.9
4,607,375	-		PFR28_04031	0.79	+0.9
4,607,375	-		PFR28_04031	0.79	+1.4
4,607,375	-		PFR28_04031	0.79	+2.0
4,607,375	-		PFR28_04031	0.79	+0.0
4,607,375	-		PFR28_04031	0.79	+1.1
4,607,406	-		PFR28_04031	0.82	+1.9
4,607,406	-		PFR28_04031	0.82	+1.8
4,607,406	-		PFR28_04031	0.82	+0.6
4,607,461	-		PFR28_04031	0.87	+1.3
4,607,461	-		PFR28_04031	0.87	+1.8