Experiment: DMSO control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS14910 and ABIE41_RS14915 are separated by 36 nucleotides ABIE41_RS14915 and ABIE41_RS14920 are separated by 171 nucleotides ABIE41_RS14920 and ABIE41_RS14925 are separated by 145 nucleotides
ABIE41_RS14910: ABIE41_RS14910 - altronate dehydratase family protein, at 3,044,617 to 3,046,146
_RS14910
ABIE41_RS14915: ABIE41_RS14915 - VOC family protein, at 3,046,183 to 3,047,157
_RS14915
ABIE41_RS14920: ABIE41_RS14920 - hypothetical protein, at 3,047,329 to 3,047,721
_RS14920
ABIE41_RS14925: ABIE41_RS14925 - aminotransferase, at 3,047,867 to 3,049,051
_RS14925
Position (kb)
3046
3047
3048 Strain fitness (log2 ratio)
-1
0
1
2 at 3045.187 kb on + strand, within ABIE41_RS14910 at 3045.188 kb on - strand, within ABIE41_RS14910 at 3045.271 kb on + strand, within ABIE41_RS14910 at 3045.271 kb on + strand, within ABIE41_RS14910 at 3045.271 kb on + strand, within ABIE41_RS14910 at 3045.272 kb on - strand, within ABIE41_RS14910 at 3045.553 kb on + strand, within ABIE41_RS14910 at 3045.554 kb on - strand, within ABIE41_RS14910 at 3045.554 kb on - strand, within ABIE41_RS14910 at 3045.554 kb on - strand, within ABIE41_RS14910 at 3045.554 kb on - strand, within ABIE41_RS14910 at 3045.640 kb on + strand, within ABIE41_RS14910 at 3045.641 kb on - strand, within ABIE41_RS14910 at 3045.641 kb on - strand, within ABIE41_RS14910 at 3045.641 kb on - strand, within ABIE41_RS14910 at 3045.641 kb on - strand, within ABIE41_RS14910 at 3045.641 kb on - strand, within ABIE41_RS14910 at 3045.641 kb on - strand, within ABIE41_RS14910 at 3045.772 kb on + strand, within ABIE41_RS14910 at 3045.772 kb on + strand, within ABIE41_RS14910 at 3045.779 kb on - strand, within ABIE41_RS14910 at 3045.811 kb on + strand, within ABIE41_RS14910 at 3045.812 kb on - strand, within ABIE41_RS14910 at 3045.813 kb on + strand, within ABIE41_RS14910 at 3045.819 kb on + strand, within ABIE41_RS14910 at 3045.820 kb on - strand, within ABIE41_RS14910 at 3045.830 kb on - strand, within ABIE41_RS14910 at 3045.907 kb on + strand, within ABIE41_RS14910 at 3045.958 kb on + strand, within ABIE41_RS14910 at 3045.958 kb on + strand, within ABIE41_RS14910 at 3045.958 kb on + strand, within ABIE41_RS14910 at 3045.958 kb on + strand, within ABIE41_RS14910 at 3045.958 kb on + strand, within ABIE41_RS14910 at 3045.959 kb on - strand, within ABIE41_RS14910 at 3046.406 kb on + strand, within ABIE41_RS14915 at 3046.406 kb on + strand, within ABIE41_RS14915 at 3046.476 kb on - strand, within ABIE41_RS14915 at 3046.476 kb on - strand, within ABIE41_RS14915 at 3046.667 kb on + strand, within ABIE41_RS14915 at 3046.667 kb on + strand, within ABIE41_RS14915 at 3046.667 kb on + strand, within ABIE41_RS14915 at 3046.668 kb on - strand, within ABIE41_RS14915 at 3046.955 kb on + strand, within ABIE41_RS14915 at 3046.955 kb on + strand, within ABIE41_RS14915 at 3047.189 kb on + strand at 3047.243 kb on + strand at 3047.244 kb on - strand at 3047.760 kb on - strand at 3047.875 kb on + strand at 3047.970 kb on + strand at 3048.061 kb on - strand, within ABIE41_RS14925
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO control remove 3,045,187 + ABIE41_RS14910 0.37 +0.3 3,045,188 - ABIE41_RS14910 0.37 +0.2 3,045,271 + ABIE41_RS14910 0.43 +1.2 3,045,271 + ABIE41_RS14910 0.43 +0.1 3,045,271 + ABIE41_RS14910 0.43 +0.1 3,045,272 - ABIE41_RS14910 0.43 -0.5 3,045,553 + ABIE41_RS14910 0.61 -0.3 3,045,554 - ABIE41_RS14910 0.61 +0.4 3,045,554 - ABIE41_RS14910 0.61 -0.4 3,045,554 - ABIE41_RS14910 0.61 +0.3 3,045,554 - ABIE41_RS14910 0.61 -0.6 3,045,640 + ABIE41_RS14910 0.67 +0.7 3,045,641 - ABIE41_RS14910 0.67 -0.3 3,045,641 - ABIE41_RS14910 0.67 -1.2 3,045,641 - ABIE41_RS14910 0.67 +0.0 3,045,641 - ABIE41_RS14910 0.67 -0.3 3,045,641 - ABIE41_RS14910 0.67 -0.0 3,045,641 - ABIE41_RS14910 0.67 +0.0 3,045,772 + ABIE41_RS14910 0.75 +0.1 3,045,772 + ABIE41_RS14910 0.75 +0.2 3,045,779 - ABIE41_RS14910 0.76 -0.6 3,045,811 + ABIE41_RS14910 0.78 -0.4 3,045,812 - ABIE41_RS14910 0.78 +1.1 3,045,813 + ABIE41_RS14910 0.78 -0.0 3,045,819 + ABIE41_RS14910 0.79 -0.9 3,045,820 - ABIE41_RS14910 0.79 -0.7 3,045,830 - ABIE41_RS14910 0.79 +2.1 3,045,907 + ABIE41_RS14910 0.84 +0.7 3,045,958 + ABIE41_RS14910 0.88 -0.8 3,045,958 + ABIE41_RS14910 0.88 -0.3 3,045,958 + ABIE41_RS14910 0.88 +0.2 3,045,958 + ABIE41_RS14910 0.88 -0.2 3,045,958 + ABIE41_RS14910 0.88 -0.1 3,045,959 - ABIE41_RS14910 0.88 -0.3 3,046,406 + ABIE41_RS14915 0.23 +1.3 3,046,406 + ABIE41_RS14915 0.23 +0.1 3,046,476 - ABIE41_RS14915 0.30 +0.1 3,046,476 - ABIE41_RS14915 0.30 +0.9 3,046,667 + ABIE41_RS14915 0.50 +0.3 3,046,667 + ABIE41_RS14915 0.50 -0.1 3,046,667 + ABIE41_RS14915 0.50 +0.1 3,046,668 - ABIE41_RS14915 0.50 +1.7 3,046,955 + ABIE41_RS14915 0.79 -0.1 3,046,955 + ABIE41_RS14915 0.79 +1.0 3,047,189 + -0.2 3,047,243 + +0.1 3,047,244 - -0.6 3,047,760 - -0.9 3,047,875 + +0.4 3,047,970 + +0.5 3,048,061 - ABIE41_RS14925 0.16 +0.2
Or see this region's nucleotide sequence