Strain Fitness in Bosea sp. OAE506 around ABIE41_RS11250

Experiment: DMSO control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	DMSO control
2,311,321	+				+0.5
2,311,435	+		ABIE41_RS11245	0.15	+0.0
2,311,493	-		ABIE41_RS11245	0.22	+0.1
2,311,666	+		ABIE41_RS11245	0.42	+0.7
2,311,666	+		ABIE41_RS11245	0.42	-1.3
2,311,666	+		ABIE41_RS11245	0.42	-0.1
2,311,667	-		ABIE41_RS11245	0.42	-0.0
2,311,714	+		ABIE41_RS11245	0.47	-0.9
2,311,714	+		ABIE41_RS11245	0.47	-0.0
2,311,715	-		ABIE41_RS11245	0.48	-0.1
2,311,715	-		ABIE41_RS11245	0.48	-0.8
2,311,751	-		ABIE41_RS11245	0.52	+0.5
2,311,751	-		ABIE41_RS11245	0.52	+0.7
2,311,888	+		ABIE41_RS11245	0.68	-0.9
2,311,888	+		ABIE41_RS11245	0.68	-0.2
2,311,996	+		ABIE41_RS11245	0.80	-0.1
2,311,996	+		ABIE41_RS11245	0.80	+0.4
2,311,996	+		ABIE41_RS11245	0.80	+0.7
2,311,996	+		ABIE41_RS11245	0.80	-0.3
2,311,997	-		ABIE41_RS11245	0.81	-0.1
2,311,997	-		ABIE41_RS11245	0.81	+0.7
2,312,041	+		ABIE41_RS11245	0.86	-0.4
2,312,042	-		ABIE41_RS11245	0.86	-0.9
2,312,042	-		ABIE41_RS11245	0.86	-0.5
2,312,057	-		ABIE41_RS11245	0.88	+0.7
2,312,321	+		ABIE41_RS11250	0.15	+0.2
2,312,376	+		ABIE41_RS11250	0.20	+0.8
2,312,377	-		ABIE41_RS11250	0.20	-1.0
2,312,378	+		ABIE41_RS11250	0.20	-2.4
2,312,378	+		ABIE41_RS11250	0.20	-0.6
2,312,378	+		ABIE41_RS11250	0.20	-1.2
2,312,378	+		ABIE41_RS11250	0.20	+0.1
2,312,379	-		ABIE41_RS11250	0.21	+0.5
2,312,379	-		ABIE41_RS11250	0.21	-1.5
2,312,379	-		ABIE41_RS11250	0.21	+0.4
2,312,379	-		ABIE41_RS11250	0.21	-0.3
2,312,379	-		ABIE41_RS11250	0.21	+0.7
2,312,435	+		ABIE41_RS11250	0.26	+0.0
2,312,435	+		ABIE41_RS11250	0.26	+0.5
2,312,435	+		ABIE41_RS11250	0.26	+1.4
2,312,435	+		ABIE41_RS11250	0.26	+0.5
2,312,435	+		ABIE41_RS11250	0.26	-1.1
2,312,436	-		ABIE41_RS11250	0.26	+1.3
2,312,436	-		ABIE41_RS11250	0.26	+0.4
2,312,436	-		ABIE41_RS11250	0.26	+0.2
2,312,436	-		ABIE41_RS11250	0.26	-0.4
2,312,436	-		ABIE41_RS11250	0.26	+1.4
2,312,436	-		ABIE41_RS11250	0.26	+0.7
2,312,436	-		ABIE41_RS11250	0.26	-0.2
2,312,436	-		ABIE41_RS11250	0.26	+0.1
2,312,576	+		ABIE41_RS11250	0.39	-0.1
2,312,576	+		ABIE41_RS11250	0.39	+2.0
2,312,577	-		ABIE41_RS11250	0.40	-0.5
2,312,577	-		ABIE41_RS11250	0.40	+0.2
2,312,577	-		ABIE41_RS11250	0.40	+0.1
2,312,577	-		ABIE41_RS11250	0.40	-0.1
2,312,577	-		ABIE41_RS11250	0.40	+0.7
2,312,682	+		ABIE41_RS11250	0.50	-0.5
2,312,682	+		ABIE41_RS11250	0.50	+1.7
2,312,682	+		ABIE41_RS11250	0.50	+1.1
2,312,682	+		ABIE41_RS11250	0.50	-1.0
2,312,682	+		ABIE41_RS11250	0.50	-0.5
2,312,682	+		ABIE41_RS11250	0.50	+0.7
2,312,682	+		ABIE41_RS11250	0.50	+0.5
2,312,683	-		ABIE41_RS11250	0.50	+0.2
2,312,683	-		ABIE41_RS11250	0.50	-0.5
2,312,684	+		ABIE41_RS11250	0.50	-2.2
2,312,684	+		ABIE41_RS11250	0.50	-0.0
2,312,684	+		ABIE41_RS11250	0.50	-0.0
2,312,684	+		ABIE41_RS11250	0.50	-0.3
2,312,684	+		ABIE41_RS11250	0.50	+0.1
2,312,684	+		ABIE41_RS11250	0.50	-1.9
2,312,684	+		ABIE41_RS11250	0.50	+0.0
2,312,684	+		ABIE41_RS11250	0.50	-0.3
2,312,684	+		ABIE41_RS11250	0.50	-0.2
2,312,684	+		ABIE41_RS11250	0.50	+0.1
2,312,684	+		ABIE41_RS11250	0.50	+0.2
2,312,684	+		ABIE41_RS11250	0.50	-0.3
2,312,684	+		ABIE41_RS11250	0.50	+0.1
2,312,684	+		ABIE41_RS11250	0.50	-0.1
2,312,685	-		ABIE41_RS11250	0.50	+0.0
2,312,685	-		ABIE41_RS11250	0.50	-0.3
2,312,685	-		ABIE41_RS11250	0.50	+1.4
2,312,685	-		ABIE41_RS11250	0.50	+0.6
2,312,685	-		ABIE41_RS11250	0.50	-0.4
2,312,687	-		ABIE41_RS11250	0.50	+1.7
2,312,772	-		ABIE41_RS11250	0.58	+0.1
2,312,792	+		ABIE41_RS11250	0.60	-0.1
2,312,792	+		ABIE41_RS11250	0.60	+0.1
2,312,793	-		ABIE41_RS11250	0.60	-0.5
2,312,793	-		ABIE41_RS11250	0.60	+0.3
2,312,793	-		ABIE41_RS11250	0.60	+1.6
2,312,811	-		ABIE41_RS11250	0.62	+0.3
2,312,875	+		ABIE41_RS11250	0.68	-1.0
2,312,875	+		ABIE41_RS11250	0.68	+0.1
2,312,876	-		ABIE41_RS11250	0.68	+0.6
2,312,876	-		ABIE41_RS11250	0.68	-0.2
2,312,876	-		ABIE41_RS11250	0.68	-1.5
2,313,021	+		ABIE41_RS11250	0.82	+0.0
2,313,021	+		ABIE41_RS11250	0.82	-0.3
2,313,021	+		ABIE41_RS11250	0.82	-0.0
2,313,022	-		ABIE41_RS11250	0.82	+1.9
2,313,022	-		ABIE41_RS11250	0.82	+0.4
2,313,069	-		ABIE41_RS11250	0.87	-0.2
2,313,418	+		ABIE41_RS11255	0.15	-0.7
2,313,418	+		ABIE41_RS11255	0.15	+0.3
2,313,419	-		ABIE41_RS11255	0.15	+0.4
2,313,439	+		ABIE41_RS11255	0.17	+2.0
2,313,439	+		ABIE41_RS11255	0.17	-0.2
2,313,439	+		ABIE41_RS11255	0.17	+0.4
2,313,439	+		ABIE41_RS11255	0.17	-2.3
2,313,440	-		ABIE41_RS11255	0.17	+0.7
2,313,440	-		ABIE41_RS11255	0.17	-0.2
2,313,440	-		ABIE41_RS11255	0.17	-0.9
2,313,440	-		ABIE41_RS11255	0.17	-1.0
2,313,440	-		ABIE41_RS11255	0.17	+2.7
2,313,440	-		ABIE41_RS11255	0.17	-0.1
2,313,551	-		ABIE41_RS11255	0.27	+0.4
2,313,597	-		ABIE41_RS11255	0.31	+0.5
2,313,677	-		ABIE41_RS11255	0.39	+0.3
2,313,677	-		ABIE41_RS11255	0.39	-0.4
2,313,677	-		ABIE41_RS11255	0.39	+0.5
2,314,090	+		ABIE41_RS11255	0.76	-0.2
2,314,090	+		ABIE41_RS11255	0.76	-0.5
2,314,090	+		ABIE41_RS11255	0.76	+1.7
2,314,090	+		ABIE41_RS11255	0.76	+0.1
2,314,091	-		ABIE41_RS11255	0.76	-0.0
2,314,091	-		ABIE41_RS11255	0.76	+0.1
2,314,091	-		ABIE41_RS11255	0.76	-0.3
2,314,091	-		ABIE41_RS11255	0.76	-0.3
2,314,091	-		ABIE41_RS11255	0.76	+0.3
2,314,123	+		ABIE41_RS11255	0.79	+0.4
2,314,123	+		ABIE41_RS11255	0.79	+0.1
2,314,141	+		ABIE41_RS11255	0.81	+0.3
2,314,141	+		ABIE41_RS11255	0.81	+0.4
2,314,141	+		ABIE41_RS11255	0.81	+0.7
2,314,141	+		ABIE41_RS11255	0.81	-1.2
2,314,142	-		ABIE41_RS11255	0.81	-0.6
2,314,142	-		ABIE41_RS11255	0.81	+2.3