Experiment: DMSO control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS02890 and ABIE41_RS02895 overlap by 46 nucleotides ABIE41_RS02895 and ABIE41_RS02900 overlap by 4 nucleotides ABIE41_RS02900 and ABIE41_RS02905 are separated by 80 nucleotides
ABIE41_RS02890: ABIE41_RS02890 - hypothetical protein, at 596,208 to 596,834
_RS02890
ABIE41_RS02895: ABIE41_RS02895 - GtrA family protein, at 596,789 to 597,220
_RS02895
ABIE41_RS02900: ABIE41_RS02900 - glycosyltransferase, at 597,217 to 598,179
_RS02900
ABIE41_RS02905: ABIE41_RS02905 - GDP-mannose 4,6-dehydratase, at 598,260 to 599,234
_RS02905
Position (kb) 597
598
599 Strain fitness (log2 ratio) -2
-1
0
1
2 at 596.247 kb on + strand at 596.313 kb on + strand, within ABIE41_RS02890 at 596.313 kb on + strand, within ABIE41_RS02890 at 596.313 kb on + strand, within ABIE41_RS02890 at 596.314 kb on - strand, within ABIE41_RS02890 at 596.314 kb on - strand, within ABIE41_RS02890 at 596.314 kb on - strand, within ABIE41_RS02890 at 596.448 kb on + strand, within ABIE41_RS02890 at 596.449 kb on - strand, within ABIE41_RS02890 at 596.493 kb on + strand, within ABIE41_RS02890 at 596.493 kb on + strand, within ABIE41_RS02890 at 596.493 kb on + strand, within ABIE41_RS02890 at 596.493 kb on + strand, within ABIE41_RS02890 at 596.493 kb on + strand, within ABIE41_RS02890 at 596.493 kb on + strand, within ABIE41_RS02890 at 596.493 kb on + strand, within ABIE41_RS02890 at 596.493 kb on + strand, within ABIE41_RS02890 at 596.493 kb on + strand, within ABIE41_RS02890 at 596.493 kb on + strand, within ABIE41_RS02890 at 596.494 kb on - strand, within ABIE41_RS02890 at 596.494 kb on - strand, within ABIE41_RS02890 at 596.494 kb on - strand, within ABIE41_RS02890 at 596.494 kb on - strand, within ABIE41_RS02890 at 596.494 kb on - strand, within ABIE41_RS02890 at 596.494 kb on - strand, within ABIE41_RS02890 at 596.494 kb on - strand, within ABIE41_RS02890 at 596.494 kb on - strand, within ABIE41_RS02890 at 596.494 kb on - strand, within ABIE41_RS02890 at 596.494 kb on - strand, within ABIE41_RS02890 at 596.494 kb on - strand, within ABIE41_RS02890 at 596.494 kb on - strand, within ABIE41_RS02890 at 596.494 kb on - strand, within ABIE41_RS02890 at 596.495 kb on + strand, within ABIE41_RS02890 at 596.568 kb on + strand, within ABIE41_RS02890 at 596.568 kb on + strand, within ABIE41_RS02890 at 596.568 kb on + strand, within ABIE41_RS02890 at 596.568 kb on + strand, within ABIE41_RS02890 at 596.568 kb on + strand, within ABIE41_RS02890 at 596.569 kb on - strand, within ABIE41_RS02890 at 596.697 kb on + strand, within ABIE41_RS02890 at 596.697 kb on + strand, within ABIE41_RS02890 at 596.698 kb on - strand, within ABIE41_RS02890 at 596.698 kb on - strand, within ABIE41_RS02890 at 596.698 kb on - strand, within ABIE41_RS02890 at 596.742 kb on + strand, within ABIE41_RS02890 at 596.790 kb on + strand at 596.790 kb on + strand at 596.791 kb on - strand at 596.791 kb on - strand at 596.791 kb on - strand at 596.791 kb on - strand at 596.833 kb on - strand at 596.847 kb on + strand, within ABIE41_RS02895 at 596.848 kb on - strand, within ABIE41_RS02895 at 596.848 kb on - strand, within ABIE41_RS02895 at 596.895 kb on + strand, within ABIE41_RS02895 at 596.895 kb on + strand, within ABIE41_RS02895 at 596.961 kb on + strand, within ABIE41_RS02895 at 596.962 kb on - strand, within ABIE41_RS02895 at 596.962 kb on - strand, within ABIE41_RS02895 at 596.962 kb on - strand, within ABIE41_RS02895 at 597.036 kb on + strand, within ABIE41_RS02895 at 597.036 kb on + strand, within ABIE41_RS02895 at 597.036 kb on + strand, within ABIE41_RS02895 at 597.037 kb on - strand, within ABIE41_RS02895 at 597.037 kb on - strand, within ABIE41_RS02895 at 597.037 kb on - strand, within ABIE41_RS02895 at 597.129 kb on + strand, within ABIE41_RS02895 at 597.130 kb on - strand, within ABIE41_RS02895 at 597.573 kb on - strand, within ABIE41_RS02900 at 597.573 kb on - strand, within ABIE41_RS02900 at 597.573 kb on - strand, within ABIE41_RS02900 at 597.705 kb on + strand, within ABIE41_RS02900 at 597.706 kb on - strand, within ABIE41_RS02900 at 597.761 kb on + strand, within ABIE41_RS02900 at 597.762 kb on - strand, within ABIE41_RS02900 at 597.762 kb on - strand, within ABIE41_RS02900 at 597.762 kb on - strand, within ABIE41_RS02900 at 597.762 kb on - strand, within ABIE41_RS02900 at 597.762 kb on - strand, within ABIE41_RS02900 at 597.762 kb on - strand, within ABIE41_RS02900 at 597.762 kb on - strand, within ABIE41_RS02900 at 597.912 kb on + strand, within ABIE41_RS02900 at 597.912 kb on + strand, within ABIE41_RS02900 at 597.912 kb on + strand, within ABIE41_RS02900 at 597.966 kb on + strand, within ABIE41_RS02900 at 597.967 kb on - strand, within ABIE41_RS02900 at 597.967 kb on - strand, within ABIE41_RS02900 at 598.555 kb on + strand, within ABIE41_RS02905 at 598.555 kb on + strand, within ABIE41_RS02905 at 598.563 kb on + strand, within ABIE41_RS02905 at 598.564 kb on - strand, within ABIE41_RS02905 at 598.564 kb on - strand, within ABIE41_RS02905 at 598.856 kb on + strand, within ABIE41_RS02905 at 598.856 kb on + strand, within ABIE41_RS02905 at 598.856 kb on + strand, within ABIE41_RS02905 at 598.856 kb on + strand, within ABIE41_RS02905 at 598.856 kb on + strand, within ABIE41_RS02905 at 598.857 kb on - strand, within ABIE41_RS02905 at 598.857 kb on - strand, within ABIE41_RS02905 at 598.857 kb on - strand, within ABIE41_RS02905 at 598.857 kb on - strand, within ABIE41_RS02905 at 598.864 kb on + strand, within ABIE41_RS02905 at 598.864 kb on + strand, within ABIE41_RS02905
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO control remove 596,247 + -0.5 596,313 + ABIE41_RS02890 0.17 -0.5 596,313 + ABIE41_RS02890 0.17 -0.2 596,313 + ABIE41_RS02890 0.17 -0.2 596,314 - ABIE41_RS02890 0.17 -0.2 596,314 - ABIE41_RS02890 0.17 -0.7 596,314 - ABIE41_RS02890 0.17 -1.8 596,448 + ABIE41_RS02890 0.38 -0.2 596,449 - ABIE41_RS02890 0.38 -0.1 596,493 + ABIE41_RS02890 0.45 +0.8 596,493 + ABIE41_RS02890 0.45 +2.7 596,493 + ABIE41_RS02890 0.45 -0.3 596,493 + ABIE41_RS02890 0.45 +1.6 596,493 + ABIE41_RS02890 0.45 -0.1 596,493 + ABIE41_RS02890 0.45 -2.3 596,493 + ABIE41_RS02890 0.45 +0.1 596,493 + ABIE41_RS02890 0.45 -0.9 596,493 + ABIE41_RS02890 0.45 +0.2 596,493 + ABIE41_RS02890 0.45 +0.8 596,494 - ABIE41_RS02890 0.46 -0.2 596,494 - ABIE41_RS02890 0.46 +0.4 596,494 - ABIE41_RS02890 0.46 +0.1 596,494 - ABIE41_RS02890 0.46 +0.4 596,494 - ABIE41_RS02890 0.46 +0.6 596,494 - ABIE41_RS02890 0.46 +0.0 596,494 - ABIE41_RS02890 0.46 +0.4 596,494 - ABIE41_RS02890 0.46 -0.0 596,494 - ABIE41_RS02890 0.46 +0.2 596,494 - ABIE41_RS02890 0.46 +0.0 596,494 - ABIE41_RS02890 0.46 +1.5 596,494 - ABIE41_RS02890 0.46 +1.3 596,494 - ABIE41_RS02890 0.46 +0.6 596,495 + ABIE41_RS02890 0.46 -1.5 596,568 + ABIE41_RS02890 0.57 +0.1 596,568 + ABIE41_RS02890 0.57 +0.4 596,568 + ABIE41_RS02890 0.57 -0.8 596,568 + ABIE41_RS02890 0.57 +0.5 596,568 + ABIE41_RS02890 0.57 +0.3 596,569 - ABIE41_RS02890 0.58 +1.0 596,697 + ABIE41_RS02890 0.78 +0.2 596,697 + ABIE41_RS02890 0.78 +0.4 596,698 - ABIE41_RS02890 0.78 -0.4 596,698 - ABIE41_RS02890 0.78 +0.2 596,698 - ABIE41_RS02890 0.78 +0.1 596,742 + ABIE41_RS02890 0.85 +0.4 596,790 + +0.7 596,790 + +0.2 596,791 - +0.6 596,791 - +1.1 596,791 - -0.2 596,791 - +0.1 596,833 - -1.6 596,847 + ABIE41_RS02895 0.13 -1.7 596,848 - ABIE41_RS02895 0.14 -0.1 596,848 - ABIE41_RS02895 0.14 -0.1 596,895 + ABIE41_RS02895 0.25 -0.5 596,895 + ABIE41_RS02895 0.25 +0.3 596,961 + ABIE41_RS02895 0.40 -0.1 596,962 - ABIE41_RS02895 0.40 +0.1 596,962 - ABIE41_RS02895 0.40 +0.5 596,962 - ABIE41_RS02895 0.40 -0.8 597,036 + ABIE41_RS02895 0.57 +0.2 597,036 + ABIE41_RS02895 0.57 +0.2 597,036 + ABIE41_RS02895 0.57 -0.2 597,037 - ABIE41_RS02895 0.57 +0.2 597,037 - ABIE41_RS02895 0.57 -0.3 597,037 - ABIE41_RS02895 0.57 -0.6 597,129 + ABIE41_RS02895 0.79 +0.7 597,130 - ABIE41_RS02895 0.79 -0.2 597,573 - ABIE41_RS02900 0.37 -0.2 597,573 - ABIE41_RS02900 0.37 -0.5 597,573 - ABIE41_RS02900 0.37 -0.9 597,705 + ABIE41_RS02900 0.51 +0.5 597,706 - ABIE41_RS02900 0.51 -2.1 597,761 + ABIE41_RS02900 0.56 +1.0 597,762 - ABIE41_RS02900 0.57 -0.8 597,762 - ABIE41_RS02900 0.57 +0.0 597,762 - ABIE41_RS02900 0.57 +1.2 597,762 - ABIE41_RS02900 0.57 +0.6 597,762 - ABIE41_RS02900 0.57 -0.3 597,762 - ABIE41_RS02900 0.57 -0.9 597,762 - ABIE41_RS02900 0.57 -0.6 597,912 + ABIE41_RS02900 0.72 -0.1 597,912 + ABIE41_RS02900 0.72 +0.3 597,912 + ABIE41_RS02900 0.72 +0.2 597,966 + ABIE41_RS02900 0.78 -1.0 597,967 - ABIE41_RS02900 0.78 +0.7 597,967 - ABIE41_RS02900 0.78 -0.6 598,555 + ABIE41_RS02905 0.30 -1.3 598,555 + ABIE41_RS02905 0.30 -1.6 598,563 + ABIE41_RS02905 0.31 -1.3 598,564 - ABIE41_RS02905 0.31 -1.0 598,564 - ABIE41_RS02905 0.31 -1.6 598,856 + ABIE41_RS02905 0.61 -1.9 598,856 + ABIE41_RS02905 0.61 -0.9 598,856 + ABIE41_RS02905 0.61 -1.5 598,856 + ABIE41_RS02905 0.61 +1.8 598,856 + ABIE41_RS02905 0.61 -1.2 598,857 - ABIE41_RS02905 0.61 +0.6 598,857 - ABIE41_RS02905 0.61 -1.3 598,857 - ABIE41_RS02905 0.61 -0.6 598,857 - ABIE41_RS02905 0.61 -0.2 598,864 + ABIE41_RS02905 0.62 -1.9 598,864 + ABIE41_RS02905 0.62 -1.6
Or see this region's nucleotide sequence