Strain Fitness in Pseudomonas sp. RS175 around PFR28_01437

Experiment: Xanthosine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xanthosine (C)
1,563,188	+		PFR28_01436	0.76	-0.2
1,563,189	-		PFR28_01436	0.76	+0.8
1,563,189	-		PFR28_01436	0.76	-2.4
1,563,189	-		PFR28_01436	0.76	-1.9
1,563,189	-		PFR28_01436	0.76	-0.2
1,563,189	-		PFR28_01436	0.76	-2.3
1,563,189	-		PFR28_01436	0.76	-0.3
1,563,263	+		PFR28_01436	0.78	+0.1
1,563,264	-		PFR28_01436	0.78	+1.2
1,563,341	+		PFR28_01436	0.81	-2.7
1,563,471	-		PFR28_01436	0.85	-0.4
1,563,488	-		PFR28_01436	0.86	-0.2
1,563,488	-		PFR28_01436	0.86	+0.5
1,563,488	-		PFR28_01436	0.86	+1.2
1,563,620	+		PFR28_01436	0.90	-0.6
1,563,620	+		PFR28_01436	0.90	+0.6
1,563,621	-		PFR28_01436	0.90	+0.2
1,563,621	-		PFR28_01436	0.90	+0.0
1,563,621	-		PFR28_01436	0.90	+0.6
1,563,621	-		PFR28_01436	0.90	+2.2
1,563,621	-		PFR28_01436	0.90	-2.5
1,563,641	+				+0.4
1,563,642	-				+0.4
1,563,681	+				-0.4
1,563,681	+				+0.6
1,563,682	-				-1.1
1,563,692	+				+1.4
1,563,692	+				+0.2
1,563,693	-				+0.3
1,563,796	+				-0.7
1,563,955	+				-2.1
1,563,955	+				-0.1
1,563,955	+				-0.1
1,563,955	+				+0.3
1,563,955	+				+0.3
1,563,955	+				-2.2
1,563,955	+				-1.8
1,563,956	-				+0.0
1,563,956	-				+0.9
1,563,956	-				+0.9
1,563,956	-				+1.2
1,563,956	-				+1.2
1,563,956	-				+0.5
1,563,956	-				+0.4
1,563,960	+				-1.3
1,563,960	+				-1.5
1,563,960	+				-0.4
1,563,960	+				+0.2
1,563,961	-				+0.6
1,563,961	-				-1.7
1,563,961	-				+3.0
1,563,961	-				+1.2
1,563,961	-				+0.1
1,563,991	+				-0.2
1,563,992	-				-0.8
1,563,999	+				-1.7
1,563,999	+				-0.1
1,563,999	+				-0.4
1,563,999	+				-0.4
1,563,999	+				+0.1
1,563,999	+				-1.6
1,564,000	-				+0.4
1,564,000	-				-0.8
1,564,000	-				-0.2
1,564,000	-				+0.2
1,564,034	+				+0.1
1,564,034	+				+0.0
1,564,034	+				-2.1
1,564,034	+				-1.9
1,564,034	+				+0.1
1,564,035	-				-1.4
1,564,035	-				+0.3
1,564,035	-				-0.7
1,564,035	-				+1.8
1,564,159	-				-0.2
1,564,159	-				-1.1
1,564,270	+				+0.1
1,564,271	-				+1.2
1,564,271	-				-0.8
1,564,292	+				-1.2
1,564,292	+				+0.1
1,564,293	-				+2.8
1,564,346	+				-1.1
1,564,414	+				+1.8
1,564,414	+				-1.5
1,564,415	-				+0.3
1,564,534	+		PFR28_01437	0.13	-0.4
1,564,570	+		PFR28_01437	0.14	-0.1
1,564,570	+		PFR28_01437	0.14	-2.5
1,564,570	+		PFR28_01437	0.14	-1.7
1,564,570	+		PFR28_01437	0.14	-2.4
1,564,570	+		PFR28_01437	0.14	-1.7
1,564,570	+		PFR28_01437	0.14	+1.0
1,564,570	+		PFR28_01437	0.14	-1.8
1,564,571	-		PFR28_01437	0.14	-1.4
1,564,648	+		PFR28_01437	0.17	+0.6
1,564,649	-		PFR28_01437	0.17	-0.0
1,564,649	-		PFR28_01437	0.17	+3.0
1,564,656	+		PFR28_01437	0.17	+0.4
1,564,656	+		PFR28_01437	0.17	+1.4
1,564,657	-		PFR28_01437	0.17	+0.3
1,564,657	-		PFR28_01437	0.17	+0.4
1,564,669	+		PFR28_01437	0.18	+0.5
1,564,669	+		PFR28_01437	0.18	+1.2
1,564,669	+		PFR28_01437	0.18	+0.5
1,564,669	+		PFR28_01437	0.18	-0.7
1,564,669	+		PFR28_01437	0.18	+0.7
1,564,669	+		PFR28_01437	0.18	-0.7
1,564,669	+		PFR28_01437	0.18	+1.6
1,564,669	+		PFR28_01437	0.18	-1.5
1,564,669	+		PFR28_01437	0.18	-1.7
1,564,669	+		PFR28_01437	0.18	+0.0
1,564,670	-		PFR28_01437	0.18	+3.0
1,564,670	-		PFR28_01437	0.18	+0.2
1,564,670	-		PFR28_01437	0.18	-1.4
1,564,670	-		PFR28_01437	0.18	-1.1
1,564,681	+		PFR28_01437	0.18	-2.4
1,564,708	+		PFR28_01437	0.19	+0.1
1,564,709	-		PFR28_01437	0.19	+1.3
1,564,719	+		PFR28_01437	0.19	-0.9
1,564,719	+		PFR28_01437	0.19	+0.6
1,564,735	+		PFR28_01437	0.20	-1.6
1,564,736	-		PFR28_01437	0.20	+0.2
1,564,744	+		PFR28_01437	0.20	+0.0
1,564,745	-		PFR28_01437	0.20	+0.1
1,564,745	-		PFR28_01437	0.20	-0.3
1,564,745	-		PFR28_01437	0.20	+1.1
1,565,145	+		PFR28_01437	0.34	-0.1
1,565,145	+		PFR28_01437	0.34	-0.4
1,565,145	+		PFR28_01437	0.34	-1.6
1,565,146	-		PFR28_01437	0.34	+0.2
1,565,146	-		PFR28_01437	0.34	+0.6
1,565,146	-		PFR28_01437	0.34	-0.2
1,565,279	-		PFR28_01437	0.39	+1.9
1,565,293	+		PFR28_01437	0.39	+0.2
1,565,293	+		PFR28_01437	0.39	+0.7
1,565,294	-		PFR28_01437	0.39	+0.3
1,565,323	+		PFR28_01437	0.40	+2.2
1,565,323	+		PFR28_01437	0.40	-2.6
1,565,323	+		PFR28_01437	0.40	+0.2
1,565,324	-		PFR28_01437	0.40	-0.2
1,565,596	+		PFR28_01437	0.50	+0.3
1,565,596	+		PFR28_01437	0.50	+0.4
1,565,597	-		PFR28_01437	0.50	+0.7
1,565,597	-		PFR28_01437	0.50	+0.1
1,565,599	+		PFR28_01437	0.50	-0.2
1,566,016	+		PFR28_01437	0.64	-2.2
1,566,016	+		PFR28_01437	0.64	-0.2
1,566,016	+		PFR28_01437	0.64	+1.1
1,566,017	-		PFR28_01437	0.64	+1.1
1,566,017	-		PFR28_01437	0.64	-1.0
1,566,279	+		PFR28_01437	0.73	+0.3
1,566,279	+		PFR28_01437	0.73	-1.8
1,566,280	-		PFR28_01437	0.73	+0.2
1,566,422	-		PFR28_01437	0.78	+0.3
1,566,771	+				-0.6
1,566,771	+				-0.5
1,566,771	+				+0.2
1,566,771	+				-0.7
1,566,771	+				-1.0
1,566,772	-				+0.2
1,566,772	-				+1.2
1,566,772	-				+0.5
1,566,772	-				-1.1
1,566,818	+				+1.4
1,566,819	-				-1.0
1,566,996	+				+1.5
1,567,054	+				+0.8
1,567,054	+				-0.1
1,567,055	-				+0.9
1,567,055	-				+0.6
1,567,055	-				+0.8
1,567,055	-				+1.2
1,567,226	+		PFR28_01438	0.18	-2.3
1,567,269	-		PFR28_01438	0.22	-0.5
1,567,269	-		PFR28_01438	0.22	-0.4
1,567,396	+		PFR28_01438	0.34	-0.2
1,567,396	+		PFR28_01438	0.34	-0.4
1,567,509	+		PFR28_01438	0.44	+1.1
1,567,510	-		PFR28_01438	0.45	+0.2
1,567,929	+		PFR28_01438	0.84	-0.8
1,567,929	+		PFR28_01438	0.84	+0.1
1,567,929	+		PFR28_01438	0.84	+0.8
1,567,929	+		PFR28_01438	0.84	+0.3
1,567,930	-		PFR28_01438	0.84	-1.2
1,567,930	-		PFR28_01438	0.84	-2.6
1,567,930	-		PFR28_01438	0.84	+0.2
1,568,048	+				-0.0
1,568,049	-				+0.5