Experiment: R2A with 3-octanone 5.31033333333333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS22745 and ABIE41_RS22750 overlap by 8 nucleotides ABIE41_RS22750 and ABIE41_RS22755 are separated by 163 nucleotides ABIE41_RS22755 and ABIE41_RS22760 are separated by 166 nucleotides
ABIE41_RS22745: ABIE41_RS22745 - methyltransferase, at 4,682,330 to 4,683,130
_RS22745
ABIE41_RS22750: ABIE41_RS22750 - DUF2007 domain-containing protein, at 4,683,123 to 4,683,347
_RS22750
ABIE41_RS22755: ABIE41_RS22755 - polyprenyl synthetase family protein, at 4,683,511 to 4,684,539
_RS22755
ABIE41_RS22760: ABIE41_RS22760 - DUF2254 domain-containing protein, at 4,684,706 to 4,685,953
_RS22760
Position (kb) 4683
4684
4685 Strain fitness (log2 ratio) -1
0
1
2
3 at 4682.739 kb on + strand, within ABIE41_RS22745 at 4682.739 kb on + strand, within ABIE41_RS22745 at 4682.739 kb on + strand, within ABIE41_RS22745 at 4682.739 kb on + strand, within ABIE41_RS22745 at 4682.739 kb on + strand, within ABIE41_RS22745 at 4682.739 kb on + strand, within ABIE41_RS22745 at 4682.739 kb on + strand, within ABIE41_RS22745 at 4682.740 kb on - strand, within ABIE41_RS22745 at 4682.740 kb on - strand, within ABIE41_RS22745 at 4682.742 kb on + strand, within ABIE41_RS22745 at 4682.742 kb on + strand, within ABIE41_RS22745 at 4685.163 kb on + strand, within ABIE41_RS22760 at 4685.163 kb on + strand, within ABIE41_RS22760 at 4685.163 kb on + strand, within ABIE41_RS22760 at 4685.163 kb on + strand, within ABIE41_RS22760 at 4685.164 kb on - strand, within ABIE41_RS22760 at 4685.164 kb on - strand, within ABIE41_RS22760 at 4685.164 kb on - strand, within ABIE41_RS22760 at 4685.328 kb on + strand, within ABIE41_RS22760 at 4685.328 kb on + strand, within ABIE41_RS22760 at 4685.328 kb on + strand, within ABIE41_RS22760 at 4685.329 kb on - strand, within ABIE41_RS22760 at 4685.329 kb on - strand, within ABIE41_RS22760 at 4685.346 kb on + strand, within ABIE41_RS22760 at 4685.346 kb on + strand, within ABIE41_RS22760
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with 3-octanone 5.31033333333333 mM remove 4,682,739 + ABIE41_RS22745 0.51 +0.2 4,682,739 + ABIE41_RS22745 0.51 +0.1 4,682,739 + ABIE41_RS22745 0.51 -0.1 4,682,739 + ABIE41_RS22745 0.51 -0.1 4,682,739 + ABIE41_RS22745 0.51 +0.2 4,682,739 + ABIE41_RS22745 0.51 -0.4 4,682,739 + ABIE41_RS22745 0.51 -1.0 4,682,740 - ABIE41_RS22745 0.51 +2.7 4,682,740 - ABIE41_RS22745 0.51 +1.3 4,682,742 + ABIE41_RS22745 0.51 +0.9 4,682,742 + ABIE41_RS22745 0.51 -1.1 4,685,163 + ABIE41_RS22760 0.37 -0.1 4,685,163 + ABIE41_RS22760 0.37 +0.2 4,685,163 + ABIE41_RS22760 0.37 +2.9 4,685,163 + ABIE41_RS22760 0.37 +0.8 4,685,164 - ABIE41_RS22760 0.37 +1.2 4,685,164 - ABIE41_RS22760 0.37 +0.1 4,685,164 - ABIE41_RS22760 0.37 +0.7 4,685,328 + ABIE41_RS22760 0.50 -0.3 4,685,328 + ABIE41_RS22760 0.50 +0.2 4,685,328 + ABIE41_RS22760 0.50 -0.1 4,685,329 - ABIE41_RS22760 0.50 +0.4 4,685,329 - ABIE41_RS22760 0.50 +0.4 4,685,346 + ABIE41_RS22760 0.51 -0.2 4,685,346 + ABIE41_RS22760 0.51 +0.9
Or see this region's nucleotide sequence