Strain Fitness in Bosea sp. OAE506 around ABIE41_RS14920

Experiment: R2A with 3-octanone 5.31033333333333 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS14915 and ABIE41_RS14920 are separated by 171 nucleotidesABIE41_RS14920 and ABIE41_RS14925 are separated by 145 nucleotides ABIE41_RS14915: ABIE41_RS14915 - VOC family protein, at 3,046,183 to 3,047,157 _RS14915 ABIE41_RS14920: ABIE41_RS14920 - hypothetical protein, at 3,047,329 to 3,047,721 _RS14920 ABIE41_RS14925: ABIE41_RS14925 - aminotransferase, at 3,047,867 to 3,049,051 _RS14925 Position (kb) 3047 3048Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3046.406 kb on + strand, within ABIE41_RS14915at 3046.406 kb on + strand, within ABIE41_RS14915at 3046.476 kb on - strand, within ABIE41_RS14915at 3046.476 kb on - strand, within ABIE41_RS14915at 3046.667 kb on + strand, within ABIE41_RS14915at 3046.667 kb on + strand, within ABIE41_RS14915at 3046.667 kb on + strand, within ABIE41_RS14915at 3046.668 kb on - strand, within ABIE41_RS14915at 3046.955 kb on + strand, within ABIE41_RS14915at 3046.955 kb on + strand, within ABIE41_RS14915at 3047.189 kb on + strandat 3047.243 kb on + strandat 3047.244 kb on - strandat 3047.760 kb on - strandat 3047.875 kb on + strandat 3047.970 kb on + strandat 3048.061 kb on - strand, within ABIE41_RS14925at 3048.333 kb on + strand, within ABIE41_RS14925at 3048.334 kb on - strand, within ABIE41_RS14925at 3048.367 kb on + strand, within ABIE41_RS14925at 3048.492 kb on + strand, within ABIE41_RS14925at 3048.660 kb on + strand, within ABIE41_RS14925at 3048.660 kb on + strand, within ABIE41_RS14925

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with 3-octanone 5.31033333333333 mM
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3,046,406 + ABIE41_RS14915 0.23 -0.4
3,046,406 + ABIE41_RS14915 0.23 +1.3
3,046,476 - ABIE41_RS14915 0.30 +0.5
3,046,476 - ABIE41_RS14915 0.30 -0.4
3,046,667 + ABIE41_RS14915 0.50 +0.0
3,046,667 + ABIE41_RS14915 0.50 +1.5
3,046,667 + ABIE41_RS14915 0.50 +0.9
3,046,668 - ABIE41_RS14915 0.50 +1.0
3,046,955 + ABIE41_RS14915 0.79 -1.3
3,046,955 + ABIE41_RS14915 0.79 +0.7
3,047,189 + -1.5
3,047,243 + +0.2
3,047,244 - -0.6
3,047,760 - -0.6
3,047,875 + +1.5
3,047,970 + +2.5
3,048,061 - ABIE41_RS14925 0.16 -3.5
3,048,333 + ABIE41_RS14925 0.39 +1.2
3,048,334 - ABIE41_RS14925 0.39 -1.9
3,048,367 + ABIE41_RS14925 0.42 +0.1
3,048,492 + ABIE41_RS14925 0.53 +1.2
3,048,660 + ABIE41_RS14925 0.67 +2.7
3,048,660 + ABIE41_RS14925 0.67 +0.8

Or see this region's nucleotide sequence