Strain Fitness in Bosea sp. OAE506 around ABIE41_RS04670

Experiment: R2A with 3-octanone 5.3129 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS04665 and ABIE41_RS04670 are separated by 29 nucleotidesABIE41_RS04670 and ABIE41_RS04675 are separated by 218 nucleotides ABIE41_RS04665: ABIE41_RS04665 - uroporphyrinogen decarboxylase, at 970,801 to 971,841 _RS04665 ABIE41_RS04670: ABIE41_RS04670 - protoporphyrinogen oxidase HemJ, at 971,871 to 972,293 _RS04670 ABIE41_RS04675: ABIE41_RS04675 - transcription termination factor Rho, at 972,512 to 973,777 _RS04675 Position (kb) 971 972 973Strain fitness (log2 ratio) -1 0 1at 972.459 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with 3-octanone 5.3129 mM
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972,459 + -0.1

Or see this region's nucleotide sequence