Strain Fitness in Pseudomonas sp. RS175 around PFR28_03696

Experiment: Inosine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Inosine (C)
4,261,317	+				+0.6
4,261,317	+				-0.7
4,261,318	-				+0.1
4,261,368	+		PFR28_03695	0.14	-3.3
4,261,369	-		PFR28_03695	0.15	-0.8
4,261,390	+		PFR28_03695	0.17	-0.8
4,261,390	+		PFR28_03695	0.17	-1.2
4,261,391	-		PFR28_03695	0.17	+0.9
4,261,391	-		PFR28_03695	0.17	-0.9
4,261,399	+		PFR28_03695	0.18	+0.7
4,261,434	-		PFR28_03695	0.21	-2.2
4,261,434	-		PFR28_03695	0.21	-0.5
4,261,434	-		PFR28_03695	0.21	+0.9
4,261,489	+		PFR28_03695	0.26	+1.2
4,261,489	+		PFR28_03695	0.26	-0.9
4,261,490	-		PFR28_03695	0.26	-1.8
4,261,490	-		PFR28_03695	0.26	+0.5
4,261,549	+		PFR28_03695	0.32	+0.8
4,261,549	+		PFR28_03695	0.32	-3.2
4,261,549	+		PFR28_03695	0.32	+1.8
4,261,549	+		PFR28_03695	0.32	-0.1
4,261,549	+		PFR28_03695	0.32	-3.0
4,261,549	+		PFR28_03695	0.32	-0.3
4,261,549	+		PFR28_03695	0.32	-0.0
4,261,549	+		PFR28_03695	0.32	+0.1
4,261,549	+		PFR28_03695	0.32	-1.8
4,261,549	+		PFR28_03695	0.32	-0.5
4,261,549	+		PFR28_03695	0.32	-0.5
4,261,550	-		PFR28_03695	0.32	-2.3
4,261,550	-		PFR28_03695	0.32	+0.3
4,261,550	-		PFR28_03695	0.32	+1.2
4,261,550	-		PFR28_03695	0.32	+0.7
4,261,550	-		PFR28_03695	0.32	-2.8
4,261,550	-		PFR28_03695	0.32	+1.4
4,261,550	-		PFR28_03695	0.32	+0.5
4,261,550	-		PFR28_03695	0.32	-0.6
4,261,612	+		PFR28_03695	0.38	-0.5
4,261,612	+		PFR28_03695	0.38	-1.0
4,261,612	+		PFR28_03695	0.38	+0.6
4,261,612	+		PFR28_03695	0.38	+1.6
4,261,612	+		PFR28_03695	0.38	-1.1
4,261,612	+		PFR28_03695	0.38	+0.4
4,261,613	-		PFR28_03695	0.39	+0.1
4,261,613	-		PFR28_03695	0.39	+0.7
4,261,613	-		PFR28_03695	0.39	+0.3
4,261,613	-		PFR28_03695	0.39	-1.4
4,261,613	-		PFR28_03695	0.39	-0.5
4,261,613	-		PFR28_03695	0.39	-0.2
4,261,691	-		PFR28_03695	0.46	-0.0
4,261,792	+		PFR28_03695	0.56	-0.4
4,261,792	+		PFR28_03695	0.56	-2.7
4,261,793	-		PFR28_03695	0.56	+0.8
4,261,793	-		PFR28_03695	0.56	+1.2
4,261,793	-		PFR28_03695	0.56	+1.2
4,261,793	-		PFR28_03695	0.56	+0.0
4,261,814	-		PFR28_03695	0.58	+0.1
4,261,814	-		PFR28_03695	0.58	+2.6
4,261,814	-		PFR28_03695	0.58	+1.3
4,261,841	-		PFR28_03695	0.61	-1.8
4,261,872	+		PFR28_03695	0.64	+1.1
4,261,873	-		PFR28_03695	0.64	-0.0
4,261,945	+		PFR28_03695	0.71	-0.2
4,261,945	+		PFR28_03695	0.71	-0.7
4,261,945	+		PFR28_03695	0.71	-0.0
4,261,945	+		PFR28_03695	0.71	-1.9
4,261,945	+		PFR28_03695	0.71	-0.2
4,261,945	+		PFR28_03695	0.71	-1.0
4,261,946	-		PFR28_03695	0.71	-0.3
4,261,946	-		PFR28_03695	0.71	-1.4
4,261,946	-		PFR28_03695	0.71	-0.4
4,261,946	-		PFR28_03695	0.71	+0.8
4,261,946	-		PFR28_03695	0.71	-0.8
4,261,946	-		PFR28_03695	0.71	-2.2
4,261,957	+		PFR28_03695	0.72	+0.5
4,261,957	+		PFR28_03695	0.72	-0.9
4,261,957	+		PFR28_03695	0.72	+0.6
4,261,957	+		PFR28_03695	0.72	+1.0
4,261,958	-		PFR28_03695	0.72	-1.8
4,261,958	-		PFR28_03695	0.72	-0.6
4,261,958	-		PFR28_03695	0.72	+0.8
4,261,958	-		PFR28_03695	0.72	-0.1
4,261,958	-		PFR28_03695	0.72	+1.4
4,262,173	+				-0.0
4,262,174	-				-2.3
4,262,174	-				+0.5
4,262,273	+				+0.4
4,262,273	+				-0.1
4,262,273	+				+0.1
4,262,274	-				-0.8
4,262,274	-				+0.2
4,262,274	-				-0.4
4,262,274	-				-1.1
4,262,286	-				-0.5
4,262,297	+				+0.8
4,262,298	-				-0.8
4,262,298	-				+0.8
4,262,303	-				+0.6
4,262,303	-				+1.1
4,262,303	-				-0.1
4,262,338	+				-2.1
4,262,338	+				-0.4
4,262,339	-				+0.4
4,262,339	-				-2.4
4,262,363	-				-2.2
4,262,374	-				-2.0
4,262,374	-				+0.2
4,262,388	-				-2.9
4,262,388	-				+0.4
4,262,419	-		PFR28_03696	0.13	-2.1
4,262,425	-		PFR28_03696	0.13	-0.0
4,262,488	+		PFR28_03696	0.21	+0.6
4,262,488	+		PFR28_03696	0.21	+2.6
4,262,488	+		PFR28_03696	0.21	-2.4
4,262,489	-		PFR28_03696	0.21	+0.8
4,262,489	-		PFR28_03696	0.21	-1.0
4,262,498	+		PFR28_03696	0.22	-1.9
4,262,498	+		PFR28_03696	0.22	-1.6
4,262,499	-		PFR28_03696	0.22	+1.0
4,262,527	-		PFR28_03696	0.25	+1.0
4,262,572	+		PFR28_03696	0.31	-0.4
4,262,641	+		PFR28_03696	0.39	-0.2
4,262,642	-		PFR28_03696	0.39	+0.8
4,262,642	-		PFR28_03696	0.39	-0.8
4,262,642	-		PFR28_03696	0.39	-2.9
4,262,642	-		PFR28_03696	0.39	-1.8
4,262,642	-		PFR28_03696	0.39	+2.6
4,262,669	+		PFR28_03696	0.42	+4.1
4,262,669	+		PFR28_03696	0.42	-0.4
4,262,707	+		PFR28_03696	0.47	-2.5
4,262,707	+		PFR28_03696	0.47	+2.1
4,262,707	+		PFR28_03696	0.47	-0.2
4,262,707	+		PFR28_03696	0.47	-2.3
4,262,707	+		PFR28_03696	0.47	-2.8
4,262,707	+		PFR28_03696	0.47	-2.3
4,262,707	+		PFR28_03696	0.47	-3.2
4,262,707	+		PFR28_03696	0.47	-1.9
4,262,707	+		PFR28_03696	0.47	-1.2
4,262,708	-		PFR28_03696	0.47	-1.2
4,262,708	-		PFR28_03696	0.47	-0.6
4,262,708	-		PFR28_03696	0.47	-0.5
4,262,708	-		PFR28_03696	0.47	-1.8
4,262,708	-		PFR28_03696	0.47	-0.4
4,262,708	-		PFR28_03696	0.47	-1.2
4,262,708	-		PFR28_03696	0.47	-1.6
4,262,708	-		PFR28_03696	0.47	-2.7
4,262,708	-		PFR28_03696	0.47	-0.8
4,262,815	+		PFR28_03696	0.59	-0.1
4,262,815	+		PFR28_03696	0.59	-0.4
4,262,840	+		PFR28_03696	0.62	-1.0
4,262,921	-		PFR28_03696	0.72	-3.1
4,262,989	+		PFR28_03696	0.80	-1.0
4,262,990	-		PFR28_03696	0.80	-2.0
4,262,990	-		PFR28_03696	0.80	-0.8
4,263,037	+		PFR28_03696	0.86	+1.0
4,263,037	+		PFR28_03696	0.86	-2.6
4,263,037	+		PFR28_03696	0.86	-1.2
4,263,037	+		PFR28_03696	0.86	-1.3
4,263,037	+		PFR28_03696	0.86	+0.6
4,263,037	+		PFR28_03696	0.86	-0.9
4,263,037	+		PFR28_03696	0.86	-0.3
4,263,037	+		PFR28_03696	0.86	-0.7
4,263,038	-		PFR28_03696	0.86	-1.2
4,263,038	-		PFR28_03696	0.86	-0.6
4,263,038	-		PFR28_03696	0.86	-0.9
4,263,038	-		PFR28_03696	0.86	-0.0
4,263,038	-		PFR28_03696	0.86	-2.0
4,263,038	-		PFR28_03696	0.86	-1.9
4,263,038	-		PFR28_03696	0.86	-1.2
4,263,038	-		PFR28_03696	0.86	-0.3
4,263,165	+				-2.5
4,263,165	+				-0.2
4,263,165	+				-1.6
4,263,165	+				-2.1
4,263,165	+				-0.4
4,263,166	-				-1.2
4,263,235	+				-1.9
4,263,235	+				-2.5
4,263,236	-				-0.2
4,263,236	-				-1.4
4,263,236	-				+1.8
4,263,236	-				+0.6
4,263,238	-				+0.7
4,263,238	-				+1.5
4,263,238	-				-2.3
4,263,238	-				+0.9
4,263,464	-		PFR28_03697	0.16	-3.3
4,263,464	-		PFR28_03697	0.16	-1.2
4,263,479	+		PFR28_03697	0.17	-2.0
4,263,479	+		PFR28_03697	0.17	-2.6
4,263,479	+		PFR28_03697	0.17	-2.2
4,263,479	+		PFR28_03697	0.17	-3.8
4,263,479	+		PFR28_03697	0.17	-2.5
4,263,479	+		PFR28_03697	0.17	-4.3
4,263,479	+		PFR28_03697	0.17	-0.4
4,263,480	-		PFR28_03697	0.17	-3.3
4,263,544	+		PFR28_03697	0.24	-0.8
4,263,545	-		PFR28_03697	0.24	-1.4
4,263,545	-		PFR28_03697	0.24	-1.0
4,263,553	+		PFR28_03697	0.25	-1.0
4,263,577	+		PFR28_03697	0.27	-4.1
4,263,577	+		PFR28_03697	0.27	-2.8
4,263,577	+		PFR28_03697	0.27	-1.6
4,263,578	-		PFR28_03697	0.27	-0.8
4,263,578	-		PFR28_03697	0.27	-1.1
4,263,578	-		PFR28_03697	0.27	-3.4
4,263,578	-		PFR28_03697	0.27	-1.6
4,263,578	-		PFR28_03697	0.27	-2.0
4,263,604	+		PFR28_03697	0.30	-0.4
4,263,604	+		PFR28_03697	0.30	-2.8
4,263,604	+		PFR28_03697	0.30	-3.2
4,263,604	+		PFR28_03697	0.30	-3.4
4,263,604	+		PFR28_03697	0.30	-0.8
4,263,604	+		PFR28_03697	0.30	-1.2
4,263,604	+		PFR28_03697	0.30	-3.4
4,263,604	+		PFR28_03697	0.30	-1.0
4,263,604	+		PFR28_03697	0.30	-3.5
4,263,604	+		PFR28_03697	0.30	-1.9
4,263,604	+		PFR28_03697	0.30	-3.4
4,263,605	-		PFR28_03697	0.30	+0.4
4,263,605	-		PFR28_03697	0.30	-2.7
4,263,605	-		PFR28_03697	0.30	-2.0
4,263,605	-		PFR28_03697	0.30	-3.4
4,263,605	-		PFR28_03697	0.30	-1.6
4,263,605	-		PFR28_03697	0.30	-2.8
4,263,649	+		PFR28_03697	0.34	+0.3
4,263,650	-		PFR28_03697	0.34	-3.8
4,263,667	+		PFR28_03697	0.36	-2.6
4,263,668	-		PFR28_03697	0.36	-3.1
4,263,717	-		PFR28_03697	0.41	-2.2
4,263,820	+		PFR28_03697	0.51	-2.5
4,263,820	+		PFR28_03697	0.51	-1.4
4,263,820	+		PFR28_03697	0.51	-2.8
4,263,821	-		PFR28_03697	0.51	-1.9
4,263,821	-		PFR28_03697	0.51	-3.7
4,263,862	+		PFR28_03697	0.55	-2.4
4,263,862	+		PFR28_03697	0.55	-3.7
4,263,862	+		PFR28_03697	0.55	-1.8
4,263,863	-		PFR28_03697	0.55	-3.4
4,263,863	-		PFR28_03697	0.55	-4.5
4,263,863	-		PFR28_03697	0.55	-2.1
4,263,866	+		PFR28_03697	0.55	-3.6
4,263,866	+		PFR28_03697	0.55	-1.8
4,263,866	+		PFR28_03697	0.55	-1.2
4,263,866	+		PFR28_03697	0.55	-2.3
4,263,982	+		PFR28_03697	0.67	-3.6
4,263,982	+		PFR28_03697	0.67	-1.5
4,263,983	-		PFR28_03697	0.67	-3.1
4,263,983	-		PFR28_03697	0.67	-1.6
4,263,983	-		PFR28_03697	0.67	-4.0
4,263,983	-		PFR28_03697	0.67	-1.0
4,264,054	+		PFR28_03697	0.74	-2.7