Strain Fitness in Bosea sp. OAE506 around ABIE41_RS05960

Experiment: R2A with 3-octanone 5.3129 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 3-octanone 5.3129 mM
1,228,338	+		ABIE41_RS05955	0.20	+0.4
1,228,339	-		ABIE41_RS05955	0.20	+0.5
1,228,387	+		ABIE41_RS05955	0.24	+0.8
1,228,387	+		ABIE41_RS05955	0.24	-1.5
1,228,388	-		ABIE41_RS05955	0.25	-0.2
1,228,388	-		ABIE41_RS05955	0.25	+0.2
1,228,396	+		ABIE41_RS05955	0.25	+0.0
1,228,397	-		ABIE41_RS05955	0.25	+0.1
1,228,516	+		ABIE41_RS05955	0.36	-0.4
1,228,516	+		ABIE41_RS05955	0.36	+1.6
1,228,516	+		ABIE41_RS05955	0.36	-0.7
1,228,516	+		ABIE41_RS05955	0.36	-0.0
1,228,516	+		ABIE41_RS05955	0.36	+1.4
1,228,516	+		ABIE41_RS05955	0.36	+0.9
1,228,517	-		ABIE41_RS05955	0.36	+0.1
1,228,517	-		ABIE41_RS05955	0.36	+0.8
1,228,517	-		ABIE41_RS05955	0.36	-1.7
1,228,517	-		ABIE41_RS05955	0.36	-0.3
1,228,517	-		ABIE41_RS05955	0.36	-0.1
1,228,591	+		ABIE41_RS05955	0.43	-0.2
1,228,591	+		ABIE41_RS05955	0.43	-0.5
1,228,591	+		ABIE41_RS05955	0.43	-0.8
1,228,591	+		ABIE41_RS05955	0.43	-0.0
1,228,591	+		ABIE41_RS05955	0.43	-0.3
1,228,591	+		ABIE41_RS05955	0.43	-0.3
1,228,592	-		ABIE41_RS05955	0.43	+0.4
1,228,592	-		ABIE41_RS05955	0.43	+0.3
1,228,592	-		ABIE41_RS05955	0.43	-0.8
1,228,592	-		ABIE41_RS05955	0.43	-0.3
1,228,678	+		ABIE41_RS05955	0.51	+0.4
1,228,678	+		ABIE41_RS05955	0.51	-0.7
1,228,678	+		ABIE41_RS05955	0.51	+0.3
1,228,678	+		ABIE41_RS05955	0.51	-1.2
1,228,679	-		ABIE41_RS05955	0.51	+1.1
1,228,679	-		ABIE41_RS05955	0.51	+1.1
1,228,679	-		ABIE41_RS05955	0.51	+0.3
1,228,849	+		ABIE41_RS05955	0.67	+0.6
1,228,850	-		ABIE41_RS05955	0.67	+0.5
1,228,850	-		ABIE41_RS05955	0.67	+0.5
1,228,850	-		ABIE41_RS05955	0.67	+0.2
1,228,850	-		ABIE41_RS05955	0.67	+0.4
1,228,850	-		ABIE41_RS05955	0.67	+0.4
1,228,888	+		ABIE41_RS05955	0.71	-1.2
1,228,889	-		ABIE41_RS05955	0.71	-1.7
1,229,197	+				+1.2
1,229,404	+				+0.3
1,229,404	+				-0.8
1,229,404	+				-0.4
1,229,404	+				+1.0
1,229,404	+				+0.5
1,229,404	+				-1.5
1,229,404	+				-0.0
1,229,404	+				+0.1
1,229,404	+				-0.2
1,229,404	+				-0.2
1,229,405	-				-0.2
1,229,405	-				-1.6
1,229,405	-				-0.7
1,229,405	-				-0.3
1,229,405	-				+0.1
1,229,405	-				+0.0
1,229,405	-				-0.5
1,229,405	-				+1.6
1,229,405	-				+0.2
1,229,405	-				+0.5
1,229,405	-				+0.3
1,229,422	+				+0.1
1,229,422	+				-0.2
1,229,423	-				-0.5
1,229,479	+		ABIE41_RS05960	0.13	-1.2
1,229,479	+		ABIE41_RS05960	0.13	-0.2
1,229,479	+		ABIE41_RS05960	0.13	+0.2
1,229,479	+		ABIE41_RS05960	0.13	-0.8
1,229,480	-		ABIE41_RS05960	0.13	+0.3
1,229,480	-		ABIE41_RS05960	0.13	+0.8
1,229,480	-		ABIE41_RS05960	0.13	-0.7
1,229,480	-		ABIE41_RS05960	0.13	+0.7
1,229,480	-		ABIE41_RS05960	0.13	-0.2
1,229,533	+		ABIE41_RS05960	0.17	-2.0
1,229,533	+		ABIE41_RS05960	0.17	-1.6
1,229,534	-		ABIE41_RS05960	0.17	-0.8
1,229,534	-		ABIE41_RS05960	0.17	-2.7
1,229,555	-		ABIE41_RS05960	0.18	+0.2
1,229,581	+		ABIE41_RS05960	0.20	-1.4
1,229,581	+		ABIE41_RS05960	0.20	-1.1
1,229,581	+		ABIE41_RS05960	0.20	-1.8
1,229,581	+		ABIE41_RS05960	0.20	-0.4
1,229,581	+		ABIE41_RS05960	0.20	+0.2
1,229,581	+		ABIE41_RS05960	0.20	+0.3
1,229,582	-		ABIE41_RS05960	0.20	-0.5
1,229,614	+		ABIE41_RS05960	0.23	+0.1
1,229,614	+		ABIE41_RS05960	0.23	+0.5
1,229,615	-		ABIE41_RS05960	0.23	-0.5
1,229,695	+		ABIE41_RS05960	0.29	-0.5
1,229,695	+		ABIE41_RS05960	0.29	-0.6
1,229,696	-		ABIE41_RS05960	0.29	-0.1
1,229,758	+		ABIE41_RS05960	0.34	-0.8
1,229,758	+		ABIE41_RS05960	0.34	-0.9
1,229,758	+		ABIE41_RS05960	0.34	+0.0
1,229,758	+		ABIE41_RS05960	0.34	-0.3
1,229,758	+		ABIE41_RS05960	0.34	-0.5
1,229,759	-		ABIE41_RS05960	0.34	+0.1
1,229,908	+		ABIE41_RS05960	0.45	-0.3
1,229,908	+		ABIE41_RS05960	0.45	+0.3
1,229,909	-		ABIE41_RS05960	0.45	+0.3
1,229,910	-		ABIE41_RS05960	0.45	+0.3
1,229,930	-		ABIE41_RS05960	0.46	-0.9
1,230,001	+		ABIE41_RS05960	0.52	-0.5
1,230,001	+		ABIE41_RS05960	0.52	+0.1
1,230,001	+		ABIE41_RS05960	0.52	-0.4
1,230,001	+		ABIE41_RS05960	0.52	+0.0
1,230,001	+		ABIE41_RS05960	0.52	+1.5
1,230,007	+		ABIE41_RS05960	0.52	+0.1
1,230,007	+		ABIE41_RS05960	0.52	-0.9
1,230,008	-		ABIE41_RS05960	0.52	-0.7
1,230,008	-		ABIE41_RS05960	0.52	+0.1
1,230,008	-		ABIE41_RS05960	0.52	+1.6
1,230,008	-		ABIE41_RS05960	0.52	-0.2
1,230,008	-		ABIE41_RS05960	0.52	+1.8
1,230,148	+		ABIE41_RS05960	0.63	+0.7
1,230,148	+		ABIE41_RS05960	0.63	+1.6
1,230,149	-		ABIE41_RS05960	0.63	-0.2
1,230,149	-		ABIE41_RS05960	0.63	+0.1
1,230,149	-		ABIE41_RS05960	0.63	+0.0
1,230,149	-		ABIE41_RS05960	0.63	+1.1
1,230,149	-		ABIE41_RS05960	0.63	-2.3
1,230,149	-		ABIE41_RS05960	0.63	-1.1
1,230,149	-		ABIE41_RS05960	0.63	-0.6
1,230,268	+		ABIE41_RS05960	0.72	-1.1
1,230,269	-		ABIE41_RS05960	0.72	-0.0
1,230,269	-		ABIE41_RS05960	0.72	-0.4
1,230,283	+		ABIE41_RS05960	0.73	+0.7
1,230,283	+		ABIE41_RS05960	0.73	-0.8
1,230,283	+		ABIE41_RS05960	0.73	-0.3
1,230,283	+		ABIE41_RS05960	0.73	+2.1
1,230,283	+		ABIE41_RS05960	0.73	+0.9
1,230,284	-		ABIE41_RS05960	0.73	-0.6
1,230,284	-		ABIE41_RS05960	0.73	-0.3
1,230,284	-		ABIE41_RS05960	0.73	-0.2
1,230,284	-		ABIE41_RS05960	0.73	-0.2
1,230,284	-		ABIE41_RS05960	0.73	-0.9
1,230,284	-		ABIE41_RS05960	0.73	+1.8
1,230,284	-		ABIE41_RS05960	0.73	+1.3
1,230,481	+		ABIE41_RS05960	0.88	-0.2
1,230,481	+		ABIE41_RS05960	0.88	+0.0
1,230,482	-		ABIE41_RS05960	0.88	-0.1
1,230,482	-		ABIE41_RS05960	0.88	-1.8
1,230,482	-		ABIE41_RS05960	0.88	-1.7
1,230,482	-		ABIE41_RS05960	0.88	+0.3
1,230,482	-		ABIE41_RS05960	0.88	+0.0
1,230,482	-		ABIE41_RS05960	0.88	-0.1
1,230,583	+				-0.2
1,230,583	+				-0.3
1,230,844	+				+0.1
1,230,844	+				+0.5
1,230,844	+				-0.6
1,230,844	+				-0.6
1,230,844	+				+2.4
1,230,844	+				+0.5
1,230,844	+				+0.4
1,230,844	+				-1.4
1,230,845	-		ABIE41_RS05965	0.10	+1.2
1,230,845	-		ABIE41_RS05965	0.10	+1.1
1,230,845	-		ABIE41_RS05965	0.10	-0.2
1,231,186	+		ABIE41_RS05965	0.50	-0.6
1,231,186	+		ABIE41_RS05965	0.50	+0.2
1,231,186	+		ABIE41_RS05965	0.50	+0.3
1,231,186	+		ABIE41_RS05965	0.50	+0.1
1,231,186	+		ABIE41_RS05965	0.50	-0.4
1,231,186	+		ABIE41_RS05965	0.50	+0.2
1,231,186	+		ABIE41_RS05965	0.50	+0.2
1,231,186	+		ABIE41_RS05965	0.50	+1.1
1,231,186	+		ABIE41_RS05965	0.50	-0.2
1,231,186	+		ABIE41_RS05965	0.50	+0.0
1,231,187	-		ABIE41_RS05965	0.50	-0.2
1,231,187	-		ABIE41_RS05965	0.50	+0.0
1,231,187	-		ABIE41_RS05965	0.50	+2.2
1,231,234	+		ABIE41_RS05965	0.56	+0.1
1,231,444	+		ABIE41_RS05965	0.81	-0.0
1,231,444	+		ABIE41_RS05965	0.81	+0.2
1,231,444	+		ABIE41_RS05965	0.81	+0.1
1,231,444	+		ABIE41_RS05965	0.81	+0.2
1,231,444	+		ABIE41_RS05965	0.81	-0.4
1,231,444	+		ABIE41_RS05965	0.81	+1.0
1,231,445	-		ABIE41_RS05965	0.81	+4.6
1,231,445	-		ABIE41_RS05965	0.81	-1.4
1,231,445	-		ABIE41_RS05965	0.81	+0.2
1,231,445	-		ABIE41_RS05965	0.81	+0.4
1,231,445	-		ABIE41_RS05965	0.81	+0.6
1,231,450	+		ABIE41_RS05965	0.81	+0.1
1,231,450	+		ABIE41_RS05965	0.81	-0.9
1,231,450	+		ABIE41_RS05965	0.81	+0.2
1,231,450	+		ABIE41_RS05965	0.81	+0.5
1,231,450	+		ABIE41_RS05965	0.81	+0.6
1,231,450	+		ABIE41_RS05965	0.81	+0.2
1,231,450	+		ABIE41_RS05965	0.81	+0.1
1,231,450	+		ABIE41_RS05965	0.81	+0.8
1,231,451	-		ABIE41_RS05965	0.81	+1.6
1,231,451	-		ABIE41_RS05965	0.81	+0.3
1,231,451	-		ABIE41_RS05965	0.81	+0.4
1,231,451	-		ABIE41_RS05965	0.81	+0.4
1,231,451	-		ABIE41_RS05965	0.81	+0.8
1,231,451	-		ABIE41_RS05965	0.81	+0.9
1,231,451	-		ABIE41_RS05965	0.81	-0.1
1,231,451	-		ABIE41_RS05965	0.81	+1.1
1,231,528	+				+0.4
1,231,529	-				-0.4
1,231,529	-				-0.4
1,231,529	-				-0.6
1,231,579	+				+0.3
1,231,579	+				+0.7
1,231,579	+				+1.2
1,231,579	+				-0.3
1,231,579	+				-0.7
1,231,580	-				-0.6
1,231,580	-				+3.8