Strain Fitness in Pseudomonas sp. RS175 around PFR28_05151

Experiment: Guanosine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Guanosine (C)
5,898,709	+		PFR28_05150	0.11	+1.5
5,898,709	+		PFR28_05150	0.11	+1.9
5,898,709	+		PFR28_05150	0.11	+2.1
5,898,709	+		PFR28_05150	0.11	-0.2
5,898,709	+		PFR28_05150	0.11	+3.1
5,898,709	+		PFR28_05150	0.11	-0.1
5,898,709	+		PFR28_05150	0.11	-0.9
5,898,710	-		PFR28_05150	0.11	-1.2
5,898,710	-		PFR28_05150	0.11	+0.5
5,898,710	-		PFR28_05150	0.11	-2.1
5,898,710	-		PFR28_05150	0.11	-2.1
5,898,710	-		PFR28_05150	0.11	-0.7
5,898,804	+		PFR28_05150	0.21	+0.6
5,898,839	+		PFR28_05150	0.25	-0.1
5,898,839	+		PFR28_05150	0.25	+0.5
5,898,839	+		PFR28_05150	0.25	-2.3
5,898,839	+		PFR28_05150	0.25	+0.2
5,898,839	+		PFR28_05150	0.25	+0.0
5,898,839	+		PFR28_05150	0.25	-0.3
5,898,839	+		PFR28_05150	0.25	+0.9
5,898,839	+		PFR28_05150	0.25	-1.5
5,898,839	+		PFR28_05150	0.25	+1.1
5,898,839	+		PFR28_05150	0.25	-0.6
5,898,839	+		PFR28_05150	0.25	+0.4
5,898,839	+		PFR28_05150	0.25	+0.8
5,898,839	+		PFR28_05150	0.25	-1.9
5,898,839	+		PFR28_05150	0.25	+0.4
5,898,839	+		PFR28_05150	0.25	-1.4
5,898,839	+		PFR28_05150	0.25	+1.0
5,898,839	+		PFR28_05150	0.25	-0.1
5,898,839	+		PFR28_05150	0.25	+1.3
5,898,839	+		PFR28_05150	0.25	-2.0
5,898,839	+		PFR28_05150	0.25	-2.5
5,898,839	+		PFR28_05150	0.25	-0.5
5,898,839	+		PFR28_05150	0.25	-2.7
5,898,839	+		PFR28_05150	0.25	-1.1
5,898,840	-		PFR28_05150	0.25	+0.2
5,898,840	-		PFR28_05150	0.25	+2.1
5,898,840	-		PFR28_05150	0.25	-0.4
5,898,840	-		PFR28_05150	0.25	-2.0
5,898,840	-		PFR28_05150	0.25	-1.8
5,898,840	-		PFR28_05150	0.25	+0.5
5,898,840	-		PFR28_05150	0.25	-2.5
5,898,840	-		PFR28_05150	0.25	-0.6
5,898,840	-		PFR28_05150	0.25	-0.5
5,898,840	-		PFR28_05150	0.25	-2.4
5,898,840	-		PFR28_05150	0.25	-0.2
5,898,840	-		PFR28_05150	0.25	-2.2
5,898,840	-		PFR28_05150	0.25	+0.4
5,898,840	-		PFR28_05150	0.25	+2.7
5,898,840	-		PFR28_05150	0.25	-2.2
5,898,840	-		PFR28_05150	0.25	+3.8
5,898,840	-		PFR28_05150	0.25	-1.6
5,898,840	-		PFR28_05150	0.25	-0.9
5,898,840	-		PFR28_05150	0.25	-2.6
5,898,840	-		PFR28_05150	0.25	-1.9
5,898,840	-		PFR28_05150	0.25	-0.9
5,898,840	-		PFR28_05150	0.25	-1.6
5,898,840	-		PFR28_05150	0.25	-2.6
5,898,840	-		PFR28_05150	0.25	-0.1
5,898,841	+		PFR28_05150	0.25	-0.5
5,898,841	+		PFR28_05150	0.25	+1.1
5,898,841	+		PFR28_05150	0.25	+0.2
5,898,841	+		PFR28_05150	0.25	-1.7
5,898,841	+		PFR28_05150	0.25	-1.6
5,898,841	+		PFR28_05150	0.25	+1.0
5,898,841	+		PFR28_05150	0.25	-1.3
5,898,841	+		PFR28_05150	0.25	+1.2
5,898,841	+		PFR28_05150	0.25	-3.7
5,898,841	+		PFR28_05150	0.25	+0.6
5,898,841	+		PFR28_05150	0.25	+0.5
5,898,841	+		PFR28_05150	0.25	-2.3
5,898,841	+		PFR28_05150	0.25	+1.7
5,898,841	+		PFR28_05150	0.25	+0.4
5,898,841	+		PFR28_05150	0.25	-2.2
5,898,841	+		PFR28_05150	0.25	+1.3
5,898,841	+		PFR28_05150	0.25	+1.7
5,898,842	-		PFR28_05150	0.25	-1.1
5,898,842	-		PFR28_05150	0.25	+0.8
5,898,842	-		PFR28_05150	0.25	-0.9
5,898,842	-		PFR28_05150	0.25	+0.9
5,898,842	-		PFR28_05150	0.25	+0.1
5,898,842	-		PFR28_05150	0.25	+2.1
5,898,842	-		PFR28_05150	0.25	+0.0
5,898,842	-		PFR28_05150	0.25	-0.7
5,898,842	-		PFR28_05150	0.25	+1.8
5,898,842	-		PFR28_05150	0.25	+1.7
5,898,842	-		PFR28_05150	0.25	-2.8
5,898,842	-		PFR28_05150	0.25	-0.4
5,898,842	-		PFR28_05150	0.25	-0.2
5,898,842	-		PFR28_05150	0.25	+1.9
5,898,842	-		PFR28_05150	0.25	-1.4
5,898,842	-		PFR28_05150	0.25	-1.1
5,898,842	-		PFR28_05150	0.25	-1.8
5,898,842	-		PFR28_05150	0.25	+0.9
5,898,842	-		PFR28_05150	0.25	-0.2
5,898,842	-		PFR28_05150	0.25	+1.9
5,898,842	-		PFR28_05150	0.25	-1.7
5,898,842	-		PFR28_05150	0.25	-2.0
5,898,842	-		PFR28_05150	0.25	+0.3
5,898,868	+		PFR28_05150	0.28	+0.9
5,898,868	+		PFR28_05150	0.28	+1.5
5,898,868	+		PFR28_05150	0.28	-0.1
5,898,868	+		PFR28_05150	0.28	-0.5
5,898,868	+		PFR28_05150	0.28	+2.0
5,898,869	-		PFR28_05150	0.28	-1.4
5,898,869	-		PFR28_05150	0.28	-2.2
5,898,887	-		PFR28_05150	0.30	+0.3
5,899,075	+		PFR28_05150	0.51	-1.0
5,899,076	-		PFR28_05150	0.51	+0.5
5,899,076	-		PFR28_05150	0.51	+0.2
5,899,076	-		PFR28_05150	0.51	+0.4
5,899,246	+		PFR28_05150	0.70	-2.5
5,899,246	+		PFR28_05150	0.70	+0.5
5,899,246	+		PFR28_05150	0.70	+1.8
5,899,247	-		PFR28_05150	0.70	+3.0
5,899,258	+		PFR28_05150	0.71	+1.3
5,899,258	+		PFR28_05150	0.71	+0.6
5,899,296	+		PFR28_05150	0.75	+1.4
5,899,297	-		PFR28_05150	0.75	-3.0
5,899,309	+		PFR28_05150	0.77	-1.5
5,899,309	+		PFR28_05150	0.77	-0.8
5,899,309	+		PFR28_05150	0.77	-1.3
5,899,310	-		PFR28_05150	0.77	+0.2
5,899,505	-				+1.1
5,899,505	-				-3.5
5,899,548	+				+0.7
5,899,548	+				+0.3
5,899,548	+				+0.8
5,899,549	-				-0.5
5,899,549	-				-0.9
5,899,573	+				-0.5
5,899,585	+				-0.7
5,899,585	+				+1.5
5,899,585	+				+0.3
5,899,586	-				-2.2
5,899,586	-				+2.2
5,899,586	-				-0.2
5,899,586	-				-0.8
5,899,586	-				+1.1
5,899,595	-				+0.3
5,899,627	+				+1.0
5,899,627	+				-1.4
5,899,627	+				+1.1
5,899,627	+				+0.1
5,899,627	+				-0.2
5,899,627	+				+0.9
5,899,628	-				+0.1
5,899,633	+				-0.0
5,899,633	+				+1.2
5,899,633	+				+1.9
5,899,633	+				+1.4
5,899,633	+				+1.1
5,899,633	+				+0.8
5,899,633	+				+0.5
5,899,633	+				-1.6
5,899,634	-				+0.2
5,899,634	-				-0.2
5,899,634	-				+1.8
5,899,634	-				+2.8
5,899,634	-				-2.1
5,899,634	-				-1.9
5,899,634	-				-1.1
5,899,634	-				-2.5
5,899,634	-				-0.1
5,899,634	-				+2.0
5,899,634	-				-2.8
5,899,634	-				+2.1
5,899,691	+				-1.5
5,899,691	+				-0.7
5,899,691	+				+0.3
5,899,692	-				-2.1
5,899,692	-				-2.8
5,899,692	-				+2.4
5,899,692	-				+0.7
5,899,692	-				-1.8
5,899,741	+				+0.6
5,899,930	+		PFR28_05151	0.16	-0.2
5,899,930	+		PFR28_05151	0.16	+1.9
5,899,930	+		PFR28_05151	0.16	-0.7
5,899,930	+		PFR28_05151	0.16	+1.5
5,899,931	-		PFR28_05151	0.16	-3.1
5,899,931	-		PFR28_05151	0.16	+2.8
5,900,053	+		PFR28_05151	0.24	-3.0
5,900,053	+		PFR28_05151	0.24	-0.5
5,900,053	+		PFR28_05151	0.24	-2.8
5,900,053	+		PFR28_05151	0.24	-3.5
5,900,053	+		PFR28_05151	0.24	-3.9
5,900,053	+		PFR28_05151	0.24	-2.4
5,900,053	+		PFR28_05151	0.24	+2.1
5,900,054	-		PFR28_05151	0.24	-1.3
5,900,054	-		PFR28_05151	0.24	+1.0
5,900,054	-		PFR28_05151	0.24	+0.6
5,900,054	-		PFR28_05151	0.24	-2.7
5,900,300	-		PFR28_05151	0.41	-0.5
5,900,507	+		PFR28_05151	0.54	-0.1
5,900,507	+		PFR28_05151	0.54	-1.2
5,900,623	+		PFR28_05151	0.62	+1.3
5,900,623	+		PFR28_05151	0.62	-2.4
5,900,788	+		PFR28_05151	0.73	-1.1
5,900,788	+		PFR28_05151	0.73	+1.4
5,900,788	+		PFR28_05151	0.73	-1.6
5,900,788	+		PFR28_05151	0.73	+4.6
5,900,789	-		PFR28_05151	0.73	+0.1
5,900,789	-		PFR28_05151	0.73	+2.1
5,900,789	-		PFR28_05151	0.73	+1.2
5,900,789	-		PFR28_05151	0.73	+0.9
5,900,789	-		PFR28_05151	0.73	+0.5
5,900,791	+		PFR28_05151	0.73	-0.6
5,900,791	+		PFR28_05151	0.73	-1.1
5,900,791	+		PFR28_05151	0.73	-0.3
5,900,791	+		PFR28_05151	0.73	-0.1
5,900,791	+		PFR28_05151	0.73	+1.4
5,900,791	+		PFR28_05151	0.73	-1.3
5,900,791	+		PFR28_05151	0.73	-1.4
5,900,791	+		PFR28_05151	0.73	+1.7
5,900,791	+		PFR28_05151	0.73	+2.9
5,900,791	+		PFR28_05151	0.73	-3.0
5,900,791	+		PFR28_05151	0.73	-2.3
5,900,791	+		PFR28_05151	0.73	-4.1
5,900,791	+		PFR28_05151	0.73	-1.6
5,900,791	+		PFR28_05151	0.73	-1.3
5,900,791	+		PFR28_05151	0.73	+0.5
5,900,791	+		PFR28_05151	0.73	-0.1
5,900,792	-		PFR28_05151	0.74	+0.9
5,900,792	-		PFR28_05151	0.74	-2.2
5,900,792	-		PFR28_05151	0.74	-3.8
5,900,792	-		PFR28_05151	0.74	+0.2
5,900,792	-		PFR28_05151	0.74	-0.2
5,900,792	-		PFR28_05151	0.74	+0.2
5,900,792	-		PFR28_05151	0.74	-0.5
5,900,792	-		PFR28_05151	0.74	+2.1
5,900,792	-		PFR28_05151	0.74	-3.5
5,900,792	-		PFR28_05151	0.74	-0.1
5,900,792	-		PFR28_05151	0.74	+0.5
5,900,866	+		PFR28_05151	0.78	+0.7
5,900,866	+		PFR28_05151	0.78	+0.2
5,900,866	+		PFR28_05151	0.78	-3.1
5,900,866	+		PFR28_05151	0.78	-1.3
5,900,867	-		PFR28_05151	0.79	-1.7
5,900,867	-		PFR28_05151	0.79	-0.7
5,900,867	-		PFR28_05151	0.79	+1.3
5,900,867	-		PFR28_05151	0.79	+0.1
5,900,867	-		PFR28_05151	0.79	-0.9
5,900,867	-		PFR28_05151	0.79	+0.3
5,900,878	+		PFR28_05151	0.79	-2.2
5,900,879	-		PFR28_05151	0.79	+0.4
5,900,879	-		PFR28_05151	0.79	+0.5
5,901,112	+				+0.6
5,901,112	+				+0.2
5,901,112	+				+0.1
5,901,112	+				-4.0
5,901,112	+				+0.5
5,901,112	+				+1.5
5,901,112	+				-2.9
5,901,112	+				-0.7
5,901,113	-				+0.9
5,901,113	-				-2.8
5,901,113	-				-4.4
5,901,113	-				+0.6
5,901,113	-				+0.2
5,901,114	+				-0.6
5,901,114	+				+0.9
5,901,114	+				+0.2
5,901,114	+				-0.7
5,901,115	-				+1.0
5,901,132	+				+2.0
5,901,132	+				+0.8
5,901,142	+				+0.6
5,901,142	+				-0.7
5,901,142	+				+0.2
5,901,319	+				+1.0
5,901,319	+				+1.3
5,901,319	+				-0.3
5,901,319	+				-1.6
5,901,319	+				-0.1
5,901,378	+				+0.1
5,901,378	+				+1.7
5,901,379	-				+1.0
5,901,695	+		PFR28_05152	0.26	+0.7
5,901,695	+		PFR28_05152	0.26	+0.1
5,901,695	+		PFR28_05152	0.26	+2.7
5,901,695	+		PFR28_05152	0.26	-1.1
5,901,696	-		PFR28_05152	0.26	+0.6
5,901,696	-		PFR28_05152	0.26	+3.2
5,901,851	-		PFR28_05152	0.39	-0.8
5,901,851	-		PFR28_05152	0.39	-0.7
5,901,851	-		PFR28_05152	0.39	-1.9
5,901,911	+		PFR28_05152	0.43	-2.7
5,901,911	+		PFR28_05152	0.43	+0.1
5,901,911	+		PFR28_05152	0.43	-1.4
5,901,911	+		PFR28_05152	0.43	+0.8
5,901,912	-		PFR28_05152	0.43	+1.0
5,901,912	-		PFR28_05152	0.43	-2.4
5,902,067	+		PFR28_05152	0.55	+2.4
5,902,067	+		PFR28_05152	0.55	-1.9
5,902,067	+		PFR28_05152	0.55	-2.4
5,902,068	-		PFR28_05152	0.55	-0.9
5,902,068	-		PFR28_05152	0.55	+1.3
5,902,118	+		PFR28_05152	0.59	-0.1
5,902,118	+		PFR28_05152	0.59	+3.0
5,902,118	+		PFR28_05152	0.59	-1.5
5,902,118	+		PFR28_05152	0.59	-0.9
5,902,119	-		PFR28_05152	0.59	+0.0
5,902,119	-		PFR28_05152	0.59	+0.2
5,902,119	-		PFR28_05152	0.59	-1.7
5,902,119	-		PFR28_05152	0.59	-1.5
5,902,119	-		PFR28_05152	0.59	-3.5
5,902,121	+		PFR28_05152	0.60	+1.0
5,902,121	+		PFR28_05152	0.60	-1.2
5,902,122	-		PFR28_05152	0.60	+0.6
5,902,122	-		PFR28_05152	0.60	-2.2
5,902,122	-		PFR28_05152	0.60	-2.5
5,902,167	+		PFR28_05152	0.63	-0.6
5,902,168	-		PFR28_05152	0.63	-0.1