Experiment: R2A with 3-octanone 5.3129 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS03795 and ABIE41_RS03800 are separated by 23 nucleotides ABIE41_RS03800 and ABIE41_RS03805 are separated by 263 nucleotides
ABIE41_RS03795: ABIE41_RS03795 - sulfite exporter TauE/SafE family protein, at 790,084 to 790,836
_RS03795
ABIE41_RS03800: ABIE41_RS03800 - carbonic anhydrase, at 790,860 to 791,585
_RS03800
ABIE41_RS03805: ABIE41_RS03805 - hypothetical protein, at 791,849 to 792,634
_RS03805
Position (kb) 790
791
792 Strain fitness (log2 ratio) -2
-1
0
1
2 at 789.964 kb on + strand at 789.965 kb on - strand at 789.965 kb on - strand at 789.965 kb on - strand at 790.044 kb on + strand at 790.044 kb on + strand at 790.044 kb on + strand at 790.044 kb on + strand at 790.044 kb on + strand at 790.045 kb on - strand at 790.045 kb on - strand at 790.045 kb on - strand at 790.291 kb on + strand, within ABIE41_RS03795 at 790.291 kb on + strand, within ABIE41_RS03795 at 790.291 kb on + strand, within ABIE41_RS03795 at 790.291 kb on + strand, within ABIE41_RS03795 at 790.291 kb on + strand, within ABIE41_RS03795 at 790.291 kb on + strand, within ABIE41_RS03795 at 790.291 kb on + strand, within ABIE41_RS03795 at 790.291 kb on + strand, within ABIE41_RS03795 at 790.291 kb on + strand, within ABIE41_RS03795 at 790.291 kb on + strand, within ABIE41_RS03795 at 790.292 kb on - strand, within ABIE41_RS03795 at 790.292 kb on - strand, within ABIE41_RS03795 at 790.292 kb on - strand, within ABIE41_RS03795 at 790.292 kb on - strand, within ABIE41_RS03795 at 790.292 kb on - strand, within ABIE41_RS03795 at 790.292 kb on - strand, within ABIE41_RS03795 at 790.292 kb on - strand, within ABIE41_RS03795 at 790.292 kb on - strand, within ABIE41_RS03795 at 790.895 kb on - strand at 791.163 kb on + strand, within ABIE41_RS03800 at 791.163 kb on + strand, within ABIE41_RS03800 at 791.163 kb on + strand, within ABIE41_RS03800 at 791.659 kb on + strand at 791.768 kb on - strand at 792.053 kb on + strand, within ABIE41_RS03805 at 792.053 kb on + strand, within ABIE41_RS03805 at 792.054 kb on - strand, within ABIE41_RS03805
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with 3-octanone 5.3129 mM remove 789,964 + -1.9 789,965 - +1.1 789,965 - +1.3 789,965 - -2.5 790,044 + +0.6 790,044 + -0.2 790,044 + +2.0 790,044 + +0.2 790,044 + +0.2 790,045 - +1.9 790,045 - -1.1 790,045 - +0.7 790,291 + ABIE41_RS03795 0.27 -0.8 790,291 + ABIE41_RS03795 0.27 +1.5 790,291 + ABIE41_RS03795 0.27 +0.0 790,291 + ABIE41_RS03795 0.27 +0.1 790,291 + ABIE41_RS03795 0.27 +2.6 790,291 + ABIE41_RS03795 0.27 +0.2 790,291 + ABIE41_RS03795 0.27 +0.4 790,291 + ABIE41_RS03795 0.27 +1.9 790,291 + ABIE41_RS03795 0.27 +1.7 790,291 + ABIE41_RS03795 0.27 +1.1 790,292 - ABIE41_RS03795 0.28 +0.5 790,292 - ABIE41_RS03795 0.28 -0.2 790,292 - ABIE41_RS03795 0.28 -0.8 790,292 - ABIE41_RS03795 0.28 -1.6 790,292 - ABIE41_RS03795 0.28 -0.3 790,292 - ABIE41_RS03795 0.28 +0.4 790,292 - ABIE41_RS03795 0.28 -0.5 790,292 - ABIE41_RS03795 0.28 -0.0 790,895 - -1.2 791,163 + ABIE41_RS03800 0.42 +0.1 791,163 + ABIE41_RS03800 0.42 +0.5 791,163 + ABIE41_RS03800 0.42 +0.4 791,659 + -0.3 791,768 - -0.3 792,053 + ABIE41_RS03805 0.26 -1.7 792,053 + ABIE41_RS03805 0.26 -1.5 792,054 - ABIE41_RS03805 0.26 -1.2
Or see this region's nucleotide sequence