Strain Fitness in Bosea sp. OAE506 around ABIE41_RS15780

Experiment: R2A with 2-pentyl-furan 21.3684 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS15775 and ABIE41_RS15780 are separated by 42 nucleotidesABIE41_RS15780 and ABIE41_RS15785 are separated by 19 nucleotides ABIE41_RS15775: ABIE41_RS15775 - VOC family protein, at 3,230,905 to 3,231,804 _RS15775 ABIE41_RS15780: ABIE41_RS15780 - DUF350 domain-containing protein, at 3,231,847 to 3,232,251 _RS15780 ABIE41_RS15785: ABIE41_RS15785 - glucans biosynthesis glucosyltransferase MdoH, at 3,232,271 to 3,234,445 _RS15785 Position (kb) 3231 3232 3233Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 3230.866 kb on + strandat 3230.866 kb on + strandat 3231.007 kb on + strand, within ABIE41_RS15775at 3231.007 kb on + strand, within ABIE41_RS15775at 3231.007 kb on + strand, within ABIE41_RS15775at 3231.007 kb on + strand, within ABIE41_RS15775at 3231.008 kb on - strand, within ABIE41_RS15775at 3231.008 kb on - strand, within ABIE41_RS15775at 3231.008 kb on - strand, within ABIE41_RS15775at 3231.326 kb on + strand, within ABIE41_RS15775at 3231.326 kb on + strand, within ABIE41_RS15775at 3231.326 kb on + strand, within ABIE41_RS15775at 3231.327 kb on - strand, within ABIE41_RS15775at 3231.327 kb on - strand, within ABIE41_RS15775at 3231.327 kb on - strand, within ABIE41_RS15775at 3231.327 kb on - strand, within ABIE41_RS15775at 3231.559 kb on + strand, within ABIE41_RS15775at 3231.622 kb on + strand, within ABIE41_RS15775at 3231.622 kb on + strand, within ABIE41_RS15775at 3231.622 kb on + strand, within ABIE41_RS15775at 3231.622 kb on + strand, within ABIE41_RS15775at 3231.623 kb on - strand, within ABIE41_RS15775at 3231.623 kb on - strand, within ABIE41_RS15775at 3231.922 kb on + strand, within ABIE41_RS15780at 3231.923 kb on - strand, within ABIE41_RS15780at 3231.934 kb on + strand, within ABIE41_RS15780at 3232.249 kb on + strandat 3232.277 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with 2-pentyl-furan 21.3684 mM
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3,230,866 + +0.1
3,230,866 + +1.7
3,231,007 + ABIE41_RS15775 0.11 -0.4
3,231,007 + ABIE41_RS15775 0.11 +2.6
3,231,007 + ABIE41_RS15775 0.11 -0.3
3,231,007 + ABIE41_RS15775 0.11 +0.8
3,231,008 - ABIE41_RS15775 0.11 +1.6
3,231,008 - ABIE41_RS15775 0.11 +2.5
3,231,008 - ABIE41_RS15775 0.11 +0.1
3,231,326 + ABIE41_RS15775 0.47 +0.9
3,231,326 + ABIE41_RS15775 0.47 +0.1
3,231,326 + ABIE41_RS15775 0.47 -1.2
3,231,327 - ABIE41_RS15775 0.47 +0.2
3,231,327 - ABIE41_RS15775 0.47 -1.6
3,231,327 - ABIE41_RS15775 0.47 -0.3
3,231,327 - ABIE41_RS15775 0.47 +1.1
3,231,559 + ABIE41_RS15775 0.73 -0.5
3,231,622 + ABIE41_RS15775 0.80 +0.9
3,231,622 + ABIE41_RS15775 0.80 +5.1
3,231,622 + ABIE41_RS15775 0.80 -1.8
3,231,622 + ABIE41_RS15775 0.80 -0.3
3,231,623 - ABIE41_RS15775 0.80 +0.3
3,231,623 - ABIE41_RS15775 0.80 +0.1
3,231,922 + ABIE41_RS15780 0.19 -0.2
3,231,923 - ABIE41_RS15780 0.19 -0.7
3,231,934 + ABIE41_RS15780 0.21 -0.1
3,232,249 + -1.1
3,232,277 - +0.1

Or see this region's nucleotide sequence