Strain Fitness in Bosea sp. OAE506 around ABIE41_RS07895

Experiment: R2A with 2-pentyl-furan 21.3684 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntABIE41_RS07890 and ABIE41_RS07895 are separated by 96 nucleotidesABIE41_RS07895 and ABIE41_RS07900 are separated by 66 nucleotides ABIE41_RS07890: ABIE41_RS07890 - F0F1 ATP synthase subunit alpha, at 1,621,134 to 1,622,663 _RS07890 ABIE41_RS07895: ABIE41_RS07895 - F0F1 ATP synthase subunit gamma, at 1,622,760 to 1,623,629 _RS07895 ABIE41_RS07900: ABIE41_RS07900 - F0F1 ATP synthase subunit beta, at 1,623,696 to 1,625,165 _RS07900 Position (kb) 1622 1623 1624Strain fitness (log2 ratio) -1 0 1at 1622.743 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction R2A with 2-pentyl-furan 21.3684 mM
remove
1,622,743 + -0.9

Or see this region's nucleotide sequence