Experiment: R2A with 2-pentyl-furan 21.3684 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS00365 and ABIE41_RS00370 are separated by 53 nucleotides ABIE41_RS00370 and ABIE41_RS00375 are separated by 96 nucleotides ABIE41_RS00375 and ABIE41_RS00380 are separated by 11 nucleotides
ABIE41_RS00365: ABIE41_RS00365 - DUF2188 domain-containing protein, at 63,834 to 64,079
_RS00365
ABIE41_RS00370: ABIE41_RS00370 - enoyl-ACP reductase FabI, at 64,133 to 64,960
_RS00370
ABIE41_RS00375: ABIE41_RS00375 - DUF3303 family protein, at 65,057 to 65,329
_RS00375
ABIE41_RS00380: ABIE41_RS00380 - beta-ketoacyl-ACP synthase I, at 65,341 to 66,567
_RS00380
Position (kb) 65
66 Strain fitness (log2 ratio) -2
-1
0
1
2 at 64.063 kb on + strand at 64.064 kb on - strand at 64.064 kb on - strand at 64.064 kb on - strand at 64.134 kb on + strand at 64.135 kb on - strand at 64.135 kb on - strand at 64.135 kb on - strand at 65.059 kb on - strand at 65.059 kb on - strand at 65.059 kb on - strand at 65.230 kb on - strand, within ABIE41_RS00375 at 65.230 kb on - strand, within ABIE41_RS00375 at 65.230 kb on - strand, within ABIE41_RS00375 at 65.230 kb on - strand, within ABIE41_RS00375 at 65.230 kb on - strand, within ABIE41_RS00375 at 65.278 kb on - strand, within ABIE41_RS00375 at 65.278 kb on - strand, within ABIE41_RS00375 at 65.278 kb on - strand, within ABIE41_RS00375 at 65.278 kb on - strand, within ABIE41_RS00375 at 65.278 kb on - strand, within ABIE41_RS00375 at 65.278 kb on - strand, within ABIE41_RS00375 at 65.278 kb on - strand, within ABIE41_RS00375
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with 2-pentyl-furan 21.3684 mM remove 64,063 + -0.3 64,064 - -2.2 64,064 - +2.5 64,064 - +0.3 64,134 + +0.0 64,135 - +0.0 64,135 - +1.8 64,135 - -0.2 65,059 - -0.9 65,059 - +0.5 65,059 - -0.1 65,230 - ABIE41_RS00375 0.63 +1.6 65,230 - ABIE41_RS00375 0.63 +0.8 65,230 - ABIE41_RS00375 0.63 +0.8 65,230 - ABIE41_RS00375 0.63 +0.7 65,230 - ABIE41_RS00375 0.63 -0.2 65,278 - ABIE41_RS00375 0.81 +1.7 65,278 - ABIE41_RS00375 0.81 +0.1 65,278 - ABIE41_RS00375 0.81 +1.1 65,278 - ABIE41_RS00375 0.81 +0.1 65,278 - ABIE41_RS00375 0.81 +0.2 65,278 - ABIE41_RS00375 0.81 -0.4 65,278 - ABIE41_RS00375 0.81 +1.8
Or see this region's nucleotide sequence