Strain Fitness in Bosea sp. OAE506 around ABIE41_RS17950

Experiment: R2A with 2-pentyl-furan 21.3684 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS17940 and ABIE41_RS17945 are separated by 142 nucleotidesABIE41_RS17945 and ABIE41_RS17950 are separated by 64 nucleotidesABIE41_RS17950 and ABIE41_RS17955 are separated by 298 nucleotidesABIE41_RS17955 and ABIE41_RS17960 are separated by 5 nucleotides ABIE41_RS17940: ABIE41_RS17940 - NADH-quinone oxidoreductase subunit C, at 3,694,484 to 3,695,089 _RS17940 ABIE41_RS17945: ABIE41_RS17945 - NADH-quinone oxidoreductase subunit B, at 3,695,232 to 3,695,816 _RS17945 ABIE41_RS17950: ABIE41_RS17950 - NADH-quinone oxidoreductase subunit A, at 3,695,881 to 3,696,246 _RS17950 ABIE41_RS17955: ABIE41_RS17955 - HdeA/HdeB family chaperone, at 3,696,545 to 3,696,859 _RS17955 ABIE41_RS17960: ABIE41_RS17960 - D-Ala-D-Ala carboxypeptidase family metallohydrolase, at 3,696,865 to 3,697,494 _RS17960 Position (kb) 3695 3696 3697Strain fitness (log2 ratio) -1 0 1at 3695.073 kb on - strandat 3695.849 kb on - strandat 3696.472 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with 2-pentyl-furan 21.3684 mM
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3,695,073 - +0.1
3,695,849 - +0.6
3,696,472 - +0.3

Or see this region's nucleotide sequence