Strain Fitness in Bosea sp. OAE506 around ABIE41_RS17775

Experiment: R2A with 2-pentyl-furan 21.3684 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS17765 and ABIE41_RS17770 are separated by 347 nucleotidesABIE41_RS17770 and ABIE41_RS17775 are separated by 3 nucleotidesABIE41_RS17775 and ABIE41_RS17780 are separated by 182 nucleotides ABIE41_RS17765: ABIE41_RS17765 - ACP S-malonyltransferase, at 3,659,930 to 3,660,865 _RS17765 ABIE41_RS17770: ABIE41_RS17770 - 30S ribosomal protein S6, at 3,661,213 to 3,661,671 _RS17770 ABIE41_RS17775: ABIE41_RS17775 - 30S ribosomal protein S18, at 3,661,675 to 3,661,920 _RS17775 ABIE41_RS17780: ABIE41_RS17780 - DUF2232 domain-containing protein, at 3,662,103 to 3,663,062 _RS17780 Position (kb) 3661 3662Strain fitness (log2 ratio) -3 -2 -1 0 1at 3661.906 kb on + strandat 3661.906 kb on + strandat 3662.499 kb on + strand, within ABIE41_RS17780

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with 2-pentyl-furan 21.3684 mM
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3,661,906 + -2.9
3,661,906 + -0.2
3,662,499 + ABIE41_RS17780 0.41 -0.1

Or see this region's nucleotide sequence