Strain Fitness in Bosea sp. OAE506 around ABIE41_RS10905

Experiment: R2A with 2-pentyl-furan 21.3684 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 2-pentyl-furan 21.3684 mM
2,238,523	+		ABIE41_RS10895	0.67	+1.1
2,238,524	-		ABIE41_RS10895	0.68	+0.7
2,238,524	-		ABIE41_RS10895	0.68	-0.1
2,238,524	-		ABIE41_RS10895	0.68	-0.6
2,238,524	-		ABIE41_RS10895	0.68	-0.4
2,238,784	-		ABIE41_RS10895	0.87	-1.2
2,238,907	+				-1.1
2,238,907	+				+0.5
2,238,907	+				-0.6
2,238,907	+				-1.9
2,238,907	+				+1.9
2,238,908	-				+0.3
2,238,908	-				+1.9
2,238,908	-				-1.3
2,238,999	-				-0.1
2,239,001	+				-0.7
2,239,016	+		ABIE41_RS10900	0.10	+1.1
2,239,017	-		ABIE41_RS10900	0.11	+0.2
2,239,017	-		ABIE41_RS10900	0.11	-1.7
2,239,019	+		ABIE41_RS10900	0.11	+0.8
2,239,020	-		ABIE41_RS10900	0.12	-0.2
2,239,034	+		ABIE41_RS10900	0.16	-2.3
2,239,034	+		ABIE41_RS10900	0.16	-0.5
2,239,034	+		ABIE41_RS10900	0.16	-0.2
2,239,034	+		ABIE41_RS10900	0.16	+0.6
2,239,034	+		ABIE41_RS10900	0.16	-1.8
2,239,034	+		ABIE41_RS10900	0.16	-1.3
2,239,034	+		ABIE41_RS10900	0.16	+2.7
2,239,035	-		ABIE41_RS10900	0.16	+0.3
2,239,035	-		ABIE41_RS10900	0.16	-0.5
2,239,037	+		ABIE41_RS10900	0.17	-0.5
2,239,038	-		ABIE41_RS10900	0.17	-0.2
2,239,038	-		ABIE41_RS10900	0.17	-2.2
2,239,052	+		ABIE41_RS10900	0.21	-0.5
2,239,055	+		ABIE41_RS10900	0.22	-0.4
2,239,067	+		ABIE41_RS10900	0.26	+0.7
2,239,068	-		ABIE41_RS10900	0.26	-0.8
2,239,070	+		ABIE41_RS10900	0.27	+0.3
2,239,070	+		ABIE41_RS10900	0.27	-2.5
2,239,070	+		ABIE41_RS10900	0.27	-2.6
2,239,070	+		ABIE41_RS10900	0.27	+0.1
2,239,070	+		ABIE41_RS10900	0.27	+0.2
2,239,070	+		ABIE41_RS10900	0.27	-0.6
2,239,071	-		ABIE41_RS10900	0.27	+1.1
2,239,071	-		ABIE41_RS10900	0.27	-0.1
2,239,071	-		ABIE41_RS10900	0.27	+0.3
2,239,071	-		ABIE41_RS10900	0.27	-1.0
2,239,088	+		ABIE41_RS10900	0.32	-1.1
2,239,089	-		ABIE41_RS10900	0.32	+0.1
2,239,091	+		ABIE41_RS10900	0.33	-1.3
2,239,092	-		ABIE41_RS10900	0.33	-0.7
2,239,112	+		ABIE41_RS10900	0.39	+0.3
2,239,112	+		ABIE41_RS10900	0.39	-0.7
2,239,112	+		ABIE41_RS10900	0.39	+0.8
2,239,112	+		ABIE41_RS10900	0.39	+2.2
2,239,112	+		ABIE41_RS10900	0.39	+2.3
2,239,113	-		ABIE41_RS10900	0.40	-0.2
2,239,113	-		ABIE41_RS10900	0.40	+0.4
2,239,113	-		ABIE41_RS10900	0.40	-0.3
2,239,113	-		ABIE41_RS10900	0.40	-2.4
2,239,113	-		ABIE41_RS10900	0.40	-0.6
2,239,113	-		ABIE41_RS10900	0.40	+0.5
2,239,113	-		ABIE41_RS10900	0.40	+0.9
2,239,113	-		ABIE41_RS10900	0.40	+0.1
2,239,115	+		ABIE41_RS10900	0.40	+1.2
2,239,115	+		ABIE41_RS10900	0.40	+0.5
2,239,115	+		ABIE41_RS10900	0.40	+0.3
2,239,115	+		ABIE41_RS10900	0.40	+0.2
2,239,116	-		ABIE41_RS10900	0.41	+0.0
2,239,116	-		ABIE41_RS10900	0.41	+1.3
2,239,127	+		ABIE41_RS10900	0.44	+0.9
2,239,128	-		ABIE41_RS10900	0.44	-0.3
2,239,356	+				+0.1
2,239,356	+				-1.2
2,239,356	+				-2.2
2,239,356	+				+0.2
2,239,456	+				+1.5
2,239,457	-				-1.6
2,239,457	-				+1.3
2,239,669	+		ABIE41_RS10905	0.14	-0.8
2,239,670	-		ABIE41_RS10905	0.14	+0.3
2,239,670	-		ABIE41_RS10905	0.14	+0.8
2,239,670	-		ABIE41_RS10905	0.14	+0.2
2,239,670	-		ABIE41_RS10905	0.14	-0.3
2,239,670	-		ABIE41_RS10905	0.14	+0.1
2,239,670	-		ABIE41_RS10905	0.14	-0.4
2,239,670	-		ABIE41_RS10905	0.14	+0.5
2,239,670	-		ABIE41_RS10905	0.14	+0.1
2,239,729	+		ABIE41_RS10905	0.18	-2.4
2,239,822	+		ABIE41_RS10905	0.25	+1.8
2,239,822	+		ABIE41_RS10905	0.25	-1.6
2,239,822	+		ABIE41_RS10905	0.25	-4.1
2,239,823	-		ABIE41_RS10905	0.25	-0.7
2,239,858	+		ABIE41_RS10905	0.27	-0.2
2,239,858	+		ABIE41_RS10905	0.27	-0.9
2,239,859	-		ABIE41_RS10905	0.27	-1.4
2,239,984	+		ABIE41_RS10905	0.36	-0.1
2,239,984	+		ABIE41_RS10905	0.36	+1.1
2,239,984	+		ABIE41_RS10905	0.36	+1.4
2,239,984	+		ABIE41_RS10905	0.36	+1.1
2,239,984	+		ABIE41_RS10905	0.36	+0.2
2,239,984	+		ABIE41_RS10905	0.36	-1.3
2,239,984	+		ABIE41_RS10905	0.36	+0.7
2,239,985	-		ABIE41_RS10905	0.36	-2.4
2,239,985	-		ABIE41_RS10905	0.36	-1.0
2,239,985	-		ABIE41_RS10905	0.36	-0.5
2,240,009	-		ABIE41_RS10905	0.38	+0.2
2,240,009	-		ABIE41_RS10905	0.38	+0.5
2,240,009	-		ABIE41_RS10905	0.38	-1.8
2,240,009	-		ABIE41_RS10905	0.38	-2.2
2,240,029	+		ABIE41_RS10905	0.39	+0.8
2,240,029	+		ABIE41_RS10905	0.39	+1.4
2,240,029	+		ABIE41_RS10905	0.39	+0.7
2,240,030	-		ABIE41_RS10905	0.39	+0.9
2,240,030	-		ABIE41_RS10905	0.39	+0.7
2,240,030	-		ABIE41_RS10905	0.39	-0.2
2,240,172	+		ABIE41_RS10905	0.49	-2.5
2,240,173	+		ABIE41_RS10905	0.49	+0.4
2,240,173	+		ABIE41_RS10905	0.49	+0.6
2,240,173	+		ABIE41_RS10905	0.49	+0.9
2,240,173	+		ABIE41_RS10905	0.49	+1.9
2,240,173	+		ABIE41_RS10905	0.49	-0.3
2,240,174	-		ABIE41_RS10905	0.49	+0.9
2,240,174	-		ABIE41_RS10905	0.49	-0.3
2,240,174	-		ABIE41_RS10905	0.49	+3.7
2,240,174	-		ABIE41_RS10905	0.49	+1.4
2,240,174	-		ABIE41_RS10905	0.49	-2.9
2,240,174	-		ABIE41_RS10905	0.49	-1.7
2,240,174	-		ABIE41_RS10905	0.49	-3.0
2,240,174	-		ABIE41_RS10905	0.49	-0.6
2,240,488	+		ABIE41_RS10905	0.71	+0.4
2,240,489	-		ABIE41_RS10905	0.71	+0.2
2,240,489	-		ABIE41_RS10905	0.71	+0.3
2,240,489	-		ABIE41_RS10905	0.71	-0.0
2,240,489	-		ABIE41_RS10905	0.71	-0.7
2,240,581	+		ABIE41_RS10905	0.77	+2.5
2,240,581	+		ABIE41_RS10905	0.77	+1.2
2,240,581	+		ABIE41_RS10905	0.77	-1.0
2,240,582	-		ABIE41_RS10905	0.77	+1.1
2,240,674	+		ABIE41_RS10905	0.84	+1.5
2,240,674	+		ABIE41_RS10905	0.84	+0.7
2,240,674	+		ABIE41_RS10905	0.84	-0.2
2,240,674	+		ABIE41_RS10905	0.84	+0.9
2,240,675	-		ABIE41_RS10905	0.84	+0.0
2,240,816	+				+0.1
2,240,817	-				-0.3
2,240,817	-				+0.8
2,241,057	-		ABIE41_RS10910	0.16	-0.3
2,241,057	-		ABIE41_RS10910	0.16	-1.3
2,241,059	+		ABIE41_RS10910	0.17	+0.4
2,241,059	+		ABIE41_RS10910	0.17	-0.4
2,241,059	+		ABIE41_RS10910	0.17	+1.0
2,241,059	+		ABIE41_RS10910	0.17	+1.8
2,241,060	-		ABIE41_RS10910	0.17	-0.6
2,241,336	-				-3.2
2,241,336	-				-1.8
2,241,336	-				-2.0
2,241,351	+				-0.4
2,241,352	-				-2.6
2,241,412	+				-1.0
2,241,412	+				-0.4
2,241,452	+				-2.0
2,241,453	-				-2.5
2,241,466	+				+1.4
2,241,467	-				+0.4
2,241,483	+				+2.6
2,241,484	-				+2.1
2,241,484	-				-0.6
2,241,484	-				+1.1
2,241,552	-				-1.7
2,241,552	-				-4.1
2,241,552	-				-0.5