Experiment: R2A with 2-pentyl-furan 21.3684 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS03340 and ABIE41_RS03345 are separated by 189 nucleotides ABIE41_RS03345 and ABIE41_RS03350 are separated by 127 nucleotides
ABIE41_RS03340: ABIE41_RS03340 - molybdopterin-synthase adenylyltransferase MoeB, at 695,634 to 696,413
_RS03340
ABIE41_RS03345: ABIE41_RS03345 - BMP family ABC transporter substrate-binding protein, at 696,603 to 697,604
_RS03345
ABIE41_RS03350: ABIE41_RS03350 - ABC transporter ATP-binding protein, at 697,732 to 699,264
_RS03350
Position (kb) 696
697
698 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 695.616 kb on - strand at 696.696 kb on + strand at 696.696 kb on + strand at 697.002 kb on + strand, within ABIE41_RS03345 at 697.002 kb on + strand, within ABIE41_RS03345 at 697.002 kb on + strand, within ABIE41_RS03345 at 697.002 kb on + strand, within ABIE41_RS03345 at 697.002 kb on + strand, within ABIE41_RS03345 at 697.002 kb on + strand, within ABIE41_RS03345 at 697.002 kb on + strand, within ABIE41_RS03345 at 697.003 kb on - strand, within ABIE41_RS03345 at 697.242 kb on + strand, within ABIE41_RS03345 at 697.242 kb on + strand, within ABIE41_RS03345 at 697.242 kb on + strand, within ABIE41_RS03345 at 697.243 kb on - strand, within ABIE41_RS03345 at 697.243 kb on - strand, within ABIE41_RS03345 at 697.243 kb on - strand, within ABIE41_RS03345 at 697.243 kb on - strand, within ABIE41_RS03345 at 697.243 kb on - strand, within ABIE41_RS03345 at 697.243 kb on - strand, within ABIE41_RS03345 at 697.390 kb on - strand, within ABIE41_RS03345 at 697.390 kb on - strand, within ABIE41_RS03345 at 697.390 kb on - strand, within ABIE41_RS03345 at 697.390 kb on - strand, within ABIE41_RS03345 at 697.575 kb on + strand at 697.575 kb on + strand at 697.575 kb on + strand at 697.575 kb on + strand at 697.575 kb on + strand at 697.576 kb on - strand at 697.576 kb on - strand at 697.576 kb on - strand at 697.576 kb on - strand at 697.576 kb on - strand at 697.576 kb on - strand at 697.891 kb on + strand, within ABIE41_RS03350 at 697.900 kb on + strand, within ABIE41_RS03350 at 697.900 kb on + strand, within ABIE41_RS03350 at 698.123 kb on - strand, within ABIE41_RS03350
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with 2-pentyl-furan 21.3684 mM remove 695,616 - -1.0 696,696 + +1.8 696,696 + -0.7 697,002 + ABIE41_RS03345 0.40 +0.2 697,002 + ABIE41_RS03345 0.40 +0.6 697,002 + ABIE41_RS03345 0.40 +1.5 697,002 + ABIE41_RS03345 0.40 -0.9 697,002 + ABIE41_RS03345 0.40 +0.6 697,002 + ABIE41_RS03345 0.40 +0.3 697,002 + ABIE41_RS03345 0.40 -0.2 697,003 - ABIE41_RS03345 0.40 +0.5 697,242 + ABIE41_RS03345 0.64 +1.5 697,242 + ABIE41_RS03345 0.64 -0.6 697,242 + ABIE41_RS03345 0.64 -0.4 697,243 - ABIE41_RS03345 0.64 -2.6 697,243 - ABIE41_RS03345 0.64 +0.2 697,243 - ABIE41_RS03345 0.64 +1.0 697,243 - ABIE41_RS03345 0.64 -1.6 697,243 - ABIE41_RS03345 0.64 +0.3 697,243 - ABIE41_RS03345 0.64 -0.7 697,390 - ABIE41_RS03345 0.79 +3.2 697,390 - ABIE41_RS03345 0.79 +0.1 697,390 - ABIE41_RS03345 0.79 -0.4 697,390 - ABIE41_RS03345 0.79 -0.0 697,575 + +0.4 697,575 + -2.6 697,575 + +0.4 697,575 + -0.3 697,575 + +2.5 697,576 - -0.9 697,576 - +0.9 697,576 - -0.5 697,576 - -0.8 697,576 - +1.2 697,576 - +0.5 697,891 + ABIE41_RS03350 0.10 -0.9 697,900 + ABIE41_RS03350 0.11 +2.9 697,900 + ABIE41_RS03350 0.11 +1.0 698,123 - ABIE41_RS03350 0.26 +0.7
Or see this region's nucleotide sequence