Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS23385 and ABID97_RS23390 are separated by 137 nucleotides ABID97_RS23390 and ABID97_RS23395 are separated by 91 nucleotides ABID97_RS23395 and ABID97_RS23400 are separated by 32 nucleotides
ABID97_RS23385: ABID97_RS23385 - proline--tRNA ligase, at 4,837,448 to 4,839,193
_RS23385
ABID97_RS23390: ABID97_RS23390 - RNA pyrophosphohydrolase, at 4,839,331 to 4,839,996
_RS23390
ABID97_RS23395: ABID97_RS23395 - CNP1-like family protein, at 4,840,088 to 4,840,537
_RS23395
ABID97_RS23400: ABID97_RS23400 - glutamate 5-kinase, at 4,840,570 to 4,841,709
_RS23400
Position (kb) 4839
4840 Strain fitness (log2 ratio) -2
-1
0
1 at 4839.299 kb on - strand at 4839.331 kb on - strand at 4839.414 kb on - strand, within ABID97_RS23390 at 4839.414 kb on - strand, within ABID97_RS23390 at 4839.414 kb on - strand, within ABID97_RS23390 at 4839.414 kb on - strand, within ABID97_RS23390 at 4839.449 kb on + strand, within ABID97_RS23390 at 4839.449 kb on + strand, within ABID97_RS23390 at 4839.449 kb on + strand, within ABID97_RS23390 at 4839.559 kb on + strand, within ABID97_RS23390 at 4839.559 kb on + strand, within ABID97_RS23390 at 4839.604 kb on + strand, within ABID97_RS23390 at 4839.604 kb on + strand, within ABID97_RS23390 at 4839.605 kb on - strand, within ABID97_RS23390 at 4839.605 kb on - strand, within ABID97_RS23390 at 4839.605 kb on - strand, within ABID97_RS23390 at 4839.605 kb on - strand, within ABID97_RS23390 at 4839.629 kb on - strand, within ABID97_RS23390 at 4839.629 kb on - strand, within ABID97_RS23390 at 4839.715 kb on + strand, within ABID97_RS23390 at 4839.716 kb on - strand, within ABID97_RS23390 at 4840.199 kb on + strand, within ABID97_RS23395 at 4840.199 kb on + strand, within ABID97_RS23395 at 4840.199 kb on + strand, within ABID97_RS23395 at 4840.199 kb on + strand, within ABID97_RS23395 at 4840.199 kb on + strand, within ABID97_RS23395 at 4840.199 kb on + strand, within ABID97_RS23395 at 4840.199 kb on + strand, within ABID97_RS23395 at 4840.199 kb on + strand, within ABID97_RS23395 at 4840.200 kb on - strand, within ABID97_RS23395 at 4840.200 kb on - strand, within ABID97_RS23395 at 4840.266 kb on - strand, within ABID97_RS23395 at 4840.266 kb on - strand, within ABID97_RS23395 at 4840.266 kb on - strand, within ABID97_RS23395 at 4840.266 kb on - strand, within ABID97_RS23395 at 4840.314 kb on - strand, within ABID97_RS23395 at 4840.314 kb on - strand, within ABID97_RS23395 at 4840.314 kb on - strand, within ABID97_RS23395 at 4840.314 kb on - strand, within ABID97_RS23395 at 4840.314 kb on - strand, within ABID97_RS23395 at 4840.314 kb on - strand, within ABID97_RS23395 at 4840.345 kb on - strand, within ABID97_RS23395 at 4840.345 kb on - strand, within ABID97_RS23395 at 4840.345 kb on - strand, within ABID97_RS23395 at 4840.345 kb on - strand, within ABID97_RS23395 at 4840.352 kb on + strand, within ABID97_RS23395 at 4840.352 kb on + strand, within ABID97_RS23395 at 4840.353 kb on - strand, within ABID97_RS23395 at 4840.361 kb on + strand, within ABID97_RS23395 at 4840.535 kb on + strand at 4840.535 kb on + strand at 4840.535 kb on + strand at 4840.536 kb on - strand at 4840.536 kb on - strand at 4840.692 kb on - strand, within ABID97_RS23400
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 4,839,299 - +0.0 4,839,331 - +0.0 4,839,414 - ABID97_RS23390 0.12 -1.4 4,839,414 - ABID97_RS23390 0.12 +0.2 4,839,414 - ABID97_RS23390 0.12 +0.0 4,839,414 - ABID97_RS23390 0.12 -1.5 4,839,449 + ABID97_RS23390 0.18 -0.6 4,839,449 + ABID97_RS23390 0.18 -1.6 4,839,449 + ABID97_RS23390 0.18 +0.0 4,839,559 + ABID97_RS23390 0.34 -0.4 4,839,559 + ABID97_RS23390 0.34 -0.9 4,839,604 + ABID97_RS23390 0.41 -2.2 4,839,604 + ABID97_RS23390 0.41 -1.0 4,839,605 - ABID97_RS23390 0.41 +1.0 4,839,605 - ABID97_RS23390 0.41 -2.0 4,839,605 - ABID97_RS23390 0.41 -0.5 4,839,605 - ABID97_RS23390 0.41 -0.9 4,839,629 - ABID97_RS23390 0.45 -1.3 4,839,629 - ABID97_RS23390 0.45 -0.7 4,839,715 + ABID97_RS23390 0.58 -0.4 4,839,716 - ABID97_RS23390 0.58 -1.9 4,840,199 + ABID97_RS23395 0.25 -0.3 4,840,199 + ABID97_RS23395 0.25 +0.4 4,840,199 + ABID97_RS23395 0.25 -0.9 4,840,199 + ABID97_RS23395 0.25 -0.6 4,840,199 + ABID97_RS23395 0.25 -0.2 4,840,199 + ABID97_RS23395 0.25 +0.1 4,840,199 + ABID97_RS23395 0.25 -0.5 4,840,199 + ABID97_RS23395 0.25 +0.3 4,840,200 - ABID97_RS23395 0.25 +0.8 4,840,200 - ABID97_RS23395 0.25 -0.6 4,840,266 - ABID97_RS23395 0.40 -0.2 4,840,266 - ABID97_RS23395 0.40 -0.1 4,840,266 - ABID97_RS23395 0.40 -0.8 4,840,266 - ABID97_RS23395 0.40 -0.8 4,840,314 - ABID97_RS23395 0.50 -0.5 4,840,314 - ABID97_RS23395 0.50 +0.1 4,840,314 - ABID97_RS23395 0.50 +0.3 4,840,314 - ABID97_RS23395 0.50 -0.2 4,840,314 - ABID97_RS23395 0.50 -0.6 4,840,314 - ABID97_RS23395 0.50 -0.5 4,840,345 - ABID97_RS23395 0.57 -0.9 4,840,345 - ABID97_RS23395 0.57 -0.7 4,840,345 - ABID97_RS23395 0.57 -0.3 4,840,345 - ABID97_RS23395 0.57 +0.9 4,840,352 + ABID97_RS23395 0.59 +0.0 4,840,352 + ABID97_RS23395 0.59 +1.0 4,840,353 - ABID97_RS23395 0.59 -0.0 4,840,361 + ABID97_RS23395 0.61 -0.1 4,840,535 + +0.7 4,840,535 + +0.1 4,840,535 + +0.8 4,840,536 - -0.7 4,840,536 - -0.1 4,840,692 - ABID97_RS23400 0.11 +0.2
Or see this region's nucleotide sequence