Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS15975 and ABID97_RS15980 are separated by 122 nucleotides ABID97_RS15980 and ABID97_RS15985 overlap by 4 nucleotides ABID97_RS15985 and ABID97_RS15990 overlap by 4 nucleotides
ABID97_RS15975: ABID97_RS15975 - folate-binding protein, at 3,309,731 to 3,310,657
_RS15975
ABID97_RS15980: ABID97_RS15980 - endolytic transglycosylase MltG, at 3,310,780 to 3,311,817
_RS15980
ABID97_RS15985: ABID97_RS15985 - dTMP kinase, at 3,311,814 to 3,312,488
_RS15985
ABID97_RS15990: ABID97_RS15990 - DNA polymerase III subunit delta', at 3,312,485 to 3,313,507
_RS15990
Position (kb) 3310
3311
3312 Strain fitness (log2 ratio) -2
-1
0
1 at 3310.666 kb on + strand at 3310.666 kb on + strand at 3310.667 kb on - strand at 3310.667 kb on - strand at 3310.985 kb on + strand, within ABID97_RS15980 at 3310.985 kb on + strand, within ABID97_RS15980 at 3310.985 kb on + strand, within ABID97_RS15980 at 3310.985 kb on + strand, within ABID97_RS15980 at 3310.986 kb on - strand, within ABID97_RS15980 at 3310.986 kb on - strand, within ABID97_RS15980
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 3,310,666 + -1.9 3,310,666 + -0.1 3,310,667 - +0.6 3,310,667 - +0.6 3,310,985 + ABID97_RS15980 0.20 -1.5 3,310,985 + ABID97_RS15980 0.20 -1.0 3,310,985 + ABID97_RS15980 0.20 -0.2 3,310,985 + ABID97_RS15980 0.20 -0.2 3,310,986 - ABID97_RS15980 0.20 -0.5 3,310,986 - ABID97_RS15980 0.20 +0.5
Or see this region's nucleotide sequence