Strain Fitness in Bosea sp. OAE506 around ABIE41_RS06010

Experiment: R2A with 1-octen-3-ol 0.493390333333333 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 1-octen-3-ol 0.493390333333333 mM
1,238,470	+		ABIE41_RS06005	0.21	+0.4
1,238,470	+		ABIE41_RS06005	0.21	+0.0
1,238,470	+		ABIE41_RS06005	0.21	-0.6
1,238,470	+		ABIE41_RS06005	0.21	-1.4
1,238,471	-		ABIE41_RS06005	0.21	+0.2
1,238,471	-		ABIE41_RS06005	0.21	-0.0
1,238,471	-		ABIE41_RS06005	0.21	-1.6
1,238,471	-		ABIE41_RS06005	0.21	+1.1
1,238,471	-		ABIE41_RS06005	0.21	+0.2
1,238,471	-		ABIE41_RS06005	0.21	+0.1
1,238,471	-		ABIE41_RS06005	0.21	-0.3
1,238,471	-		ABIE41_RS06005	0.21	-0.5
1,238,471	-		ABIE41_RS06005	0.21	+0.1
1,238,476	+		ABIE41_RS06005	0.22	-0.3
1,238,476	+		ABIE41_RS06005	0.22	-1.8
1,238,477	-		ABIE41_RS06005	0.22	-2.2
1,238,477	-		ABIE41_RS06005	0.22	-0.1
1,238,498	-		ABIE41_RS06005	0.24	-0.2
1,238,503	+		ABIE41_RS06005	0.25	-0.8
1,238,504	-		ABIE41_RS06005	0.25	+0.1
1,238,566	+		ABIE41_RS06005	0.31	+0.6
1,238,567	-		ABIE41_RS06005	0.31	+0.2
1,238,618	-		ABIE41_RS06005	0.37	+0.4
1,238,618	-		ABIE41_RS06005	0.37	+1.9
1,238,618	-		ABIE41_RS06005	0.37	-0.2
1,238,638	+		ABIE41_RS06005	0.39	+0.2
1,238,638	+		ABIE41_RS06005	0.39	+0.1
1,238,638	+		ABIE41_RS06005	0.39	-1.5
1,238,638	+		ABIE41_RS06005	0.39	-0.1
1,238,639	-		ABIE41_RS06005	0.39	-0.0
1,238,639	-		ABIE41_RS06005	0.39	-0.9
1,238,639	-		ABIE41_RS06005	0.39	+0.2
1,238,639	-		ABIE41_RS06005	0.39	+0.1
1,238,677	+		ABIE41_RS06005	0.43	-2.0
1,238,678	-		ABIE41_RS06005	0.44	-0.3
1,238,678	-		ABIE41_RS06005	0.44	-0.2
1,238,678	-		ABIE41_RS06005	0.44	-0.2
1,238,678	-		ABIE41_RS06005	0.44	+0.1
1,238,678	-		ABIE41_RS06005	0.44	+0.6
1,238,713	+		ABIE41_RS06005	0.47	+2.4
1,238,713	+		ABIE41_RS06005	0.47	+0.1
1,238,713	+		ABIE41_RS06005	0.47	+0.1
1,238,713	+		ABIE41_RS06005	0.47	+0.4
1,238,713	+		ABIE41_RS06005	0.47	+0.1
1,238,713	+		ABIE41_RS06005	0.47	+0.5
1,238,713	+		ABIE41_RS06005	0.47	-0.1
1,238,714	-		ABIE41_RS06005	0.47	+0.1
1,238,714	-		ABIE41_RS06005	0.47	+2.4
1,238,720	-		ABIE41_RS06005	0.48	+0.6
1,238,720	-		ABIE41_RS06005	0.48	+0.2
1,238,734	+		ABIE41_RS06005	0.50	-0.0
1,238,734	+		ABIE41_RS06005	0.50	+0.1
1,238,810	-		ABIE41_RS06005	0.58	+0.7
1,238,812	+		ABIE41_RS06005	0.58	-1.7
1,238,812	+		ABIE41_RS06005	0.58	-1.5
1,238,812	+		ABIE41_RS06005	0.58	-0.2
1,238,812	+		ABIE41_RS06005	0.58	+1.7
1,238,812	+		ABIE41_RS06005	0.58	+1.1
1,238,812	+		ABIE41_RS06005	0.58	-1.6
1,238,813	-		ABIE41_RS06005	0.58	+1.7
1,238,813	-		ABIE41_RS06005	0.58	+3.3
1,238,813	-		ABIE41_RS06005	0.58	-0.5
1,238,813	-		ABIE41_RS06005	0.58	+0.0
1,238,813	-		ABIE41_RS06005	0.58	+0.3
1,238,813	-		ABIE41_RS06005	0.58	+0.5
1,238,813	-		ABIE41_RS06005	0.58	+2.1
1,238,813	-		ABIE41_RS06005	0.58	-1.8
1,238,815	+		ABIE41_RS06005	0.58	+0.1
1,238,817	-		ABIE41_RS06005	0.59	-0.1
1,238,873	-		ABIE41_RS06005	0.65	-0.2
1,238,924	-		ABIE41_RS06005	0.70	-0.2
1,238,924	-		ABIE41_RS06005	0.70	-0.1
1,238,924	-		ABIE41_RS06005	0.70	+0.4
1,238,935	+		ABIE41_RS06005	0.71	-0.4
1,238,936	-		ABIE41_RS06005	0.72	-0.2
1,238,936	-		ABIE41_RS06005	0.72	+0.3
1,238,936	-		ABIE41_RS06005	0.72	-2.4
1,238,936	-		ABIE41_RS06005	0.72	-0.3
1,238,936	-		ABIE41_RS06005	0.72	+1.9
1,238,936	-		ABIE41_RS06005	0.72	+0.3
1,238,950	+		ABIE41_RS06005	0.73	+0.3
1,238,950	+		ABIE41_RS06005	0.73	+0.9
1,238,951	-		ABIE41_RS06005	0.73	-0.1
1,239,019	+		ABIE41_RS06005	0.81	-1.1
1,239,304	-				-0.0
1,239,604	-		ABIE41_RS06010	0.14	-0.2
1,239,604	-		ABIE41_RS06010	0.14	+0.1
1,239,604	-		ABIE41_RS06010	0.14	+0.3
1,240,032	+		ABIE41_RS06010	0.44	-1.9
1,240,033	-		ABIE41_RS06010	0.44	-0.5
1,240,033	-		ABIE41_RS06010	0.44	-2.9
1,240,033	-		ABIE41_RS06010	0.44	+1.1
1,240,033	-		ABIE41_RS06010	0.44	-0.2
1,240,033	-		ABIE41_RS06010	0.44	-1.1
1,240,152	+		ABIE41_RS06010	0.52	-1.7
1,240,153	-		ABIE41_RS06010	0.52	+0.5
1,240,203	+		ABIE41_RS06010	0.55	-0.6
1,240,203	+		ABIE41_RS06010	0.55	+0.1
1,240,204	-		ABIE41_RS06010	0.56	-2.0
1,240,327	+		ABIE41_RS06010	0.64	+0.6
1,240,350	+		ABIE41_RS06010	0.66	-0.6
1,240,351	-		ABIE41_RS06010	0.66	-0.4
1,240,351	-		ABIE41_RS06010	0.66	-0.4
1,240,351	-		ABIE41_RS06010	0.66	+1.9
1,240,351	-		ABIE41_RS06010	0.66	-0.9
1,240,383	+		ABIE41_RS06010	0.68	-2.0
1,240,383	+		ABIE41_RS06010	0.68	-0.8
1,240,384	-		ABIE41_RS06010	0.68	-0.6
1,240,485	+		ABIE41_RS06010	0.75	+0.1
1,240,485	+		ABIE41_RS06010	0.75	-1.9
1,240,485	+		ABIE41_RS06010	0.75	+2.5
1,240,485	+		ABIE41_RS06010	0.75	+0.1
1,240,485	+		ABIE41_RS06010	0.75	-0.9
1,240,485	+		ABIE41_RS06010	0.75	-0.1
1,240,485	+		ABIE41_RS06010	0.75	-0.8
1,240,485	+		ABIE41_RS06010	0.75	-0.6
1,240,485	+		ABIE41_RS06010	0.75	+0.1
1,240,485	+		ABIE41_RS06010	0.75	-0.6
1,240,486	-		ABIE41_RS06010	0.75	+0.3
1,240,486	-		ABIE41_RS06010	0.75	-0.1
1,240,486	-		ABIE41_RS06010	0.75	-0.9
1,240,486	-		ABIE41_RS06010	0.75	-0.3
1,240,486	-		ABIE41_RS06010	0.75	-0.3
1,240,486	-		ABIE41_RS06010	0.75	-0.8
1,240,488	+		ABIE41_RS06010	0.75	-1.2
1,240,489	-		ABIE41_RS06010	0.75	+2.3
1,240,489	-		ABIE41_RS06010	0.75	-0.0
1,240,527	+		ABIE41_RS06010	0.78	+0.2
1,240,527	+		ABIE41_RS06010	0.78	-1.2
1,240,527	+		ABIE41_RS06010	0.78	-0.5
1,240,527	+		ABIE41_RS06010	0.78	+0.4
1,240,528	-		ABIE41_RS06010	0.78	-0.2
1,240,528	-		ABIE41_RS06010	0.78	+0.3
1,240,528	-		ABIE41_RS06010	0.78	+0.4
1,240,528	-		ABIE41_RS06010	0.78	+0.7
1,240,602	+		ABIE41_RS06010	0.83	-0.5
1,240,603	-		ABIE41_RS06010	0.83	-0.1
1,240,672	-		ABIE41_RS06010	0.88	-0.4
1,240,672	-		ABIE41_RS06010	0.88	-0.1
1,240,672	-		ABIE41_RS06010	0.88	-0.9
1,240,728	+				-0.6
1,240,728	+				-0.0
1,240,728	+				-0.3
1,240,728	+				-0.8
1,240,728	+				-0.0
1,240,728	+				+2.5
1,240,728	+				-1.2
1,240,729	-				+0.4
1,240,729	-				+0.0
1,240,729	-				-0.2
1,240,729	-				+0.4
1,240,818	-				+1.7
1,240,924	+				-0.4
1,240,924	+				-0.1
1,240,924	+				+0.3
1,240,924	+				-0.3
1,240,924	+				-0.8
1,240,925	-				+0.1
1,240,925	-				-0.3
1,240,933	+				+0.5
1,240,992	-				-1.3