Strain Fitness in Bosea sp. OAE506 around ABIE41_RS03150

Experiment: R2A with 1-octen-3-ol 0.493390333333333 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS03145 and ABIE41_RS03150 are separated by 102 nucleotidesABIE41_RS03150 and ABIE41_RS03155 are separated by 103 nucleotides ABIE41_RS03145: ABIE41_RS03145 - GNAT family N-acetyltransferase, at 656,201 to 657,160 _RS03145 ABIE41_RS03150: ABIE41_RS03150 - ATP-binding protein, at 657,263 to 659,347 _RS03150 ABIE41_RS03155: ABIE41_RS03155 - YifB family Mg chelatase-like AAA ATPase, at 659,451 to 660,989 _RS03155 Position (kb) 657 658 659 660Strain fitness (log2 ratio) -3 -2 -1 0 1at 656.314 kb on - strand, within ABIE41_RS03145at 656.349 kb on + strand, within ABIE41_RS03145at 656.575 kb on + strand, within ABIE41_RS03145at 656.575 kb on + strand, within ABIE41_RS03145at 656.576 kb on - strand, within ABIE41_RS03145at 656.577 kb on + strand, within ABIE41_RS03145at 656.577 kb on + strand, within ABIE41_RS03145at 656.577 kb on + strand, within ABIE41_RS03145at 656.578 kb on - strand, within ABIE41_RS03145at 656.578 kb on - strand, within ABIE41_RS03145at 656.626 kb on - strand, within ABIE41_RS03145at 656.716 kb on + strand, within ABIE41_RS03145at 656.716 kb on + strand, within ABIE41_RS03145at 656.716 kb on + strand, within ABIE41_RS03145at 656.717 kb on - strand, within ABIE41_RS03145at 656.717 kb on - strand, within ABIE41_RS03145at 656.718 kb on + strand, within ABIE41_RS03145at 656.718 kb on + strand, within ABIE41_RS03145at 656.718 kb on + strand, within ABIE41_RS03145at 656.718 kb on + strand, within ABIE41_RS03145at 656.718 kb on + strand, within ABIE41_RS03145at 656.719 kb on - strand, within ABIE41_RS03145at 656.719 kb on - strand, within ABIE41_RS03145at 656.719 kb on - strand, within ABIE41_RS03145at 656.913 kb on + strand, within ABIE41_RS03145at 656.913 kb on + strand, within ABIE41_RS03145at 656.913 kb on + strand, within ABIE41_RS03145at 656.913 kb on + strand, within ABIE41_RS03145at 656.914 kb on - strand, within ABIE41_RS03145at 656.914 kb on - strand, within ABIE41_RS03145at 657.258 kb on + strandat 657.258 kb on + strandat 657.258 kb on + strandat 657.762 kb on + strand, within ABIE41_RS03150at 657.762 kb on + strand, within ABIE41_RS03150at 658.634 kb on - strand, within ABIE41_RS03150at 658.634 kb on - strand, within ABIE41_RS03150at 658.634 kb on - strand, within ABIE41_RS03150at 658.669 kb on + strand, within ABIE41_RS03150at 658.669 kb on + strand, within ABIE41_RS03150at 658.669 kb on + strand, within ABIE41_RS03150at 658.686 kb on + strand, within ABIE41_RS03150at 658.686 kb on + strand, within ABIE41_RS03150at 658.686 kb on + strand, within ABIE41_RS03150at 658.686 kb on + strand, within ABIE41_RS03150at 658.686 kb on + strand, within ABIE41_RS03150at 658.686 kb on + strand, within ABIE41_RS03150at 658.686 kb on + strand, within ABIE41_RS03150at 658.687 kb on - strand, within ABIE41_RS03150at 658.687 kb on - strand, within ABIE41_RS03150at 658.687 kb on - strand, within ABIE41_RS03150at 658.687 kb on - strand, within ABIE41_RS03150at 658.687 kb on - strand, within ABIE41_RS03150at 658.687 kb on - strand, within ABIE41_RS03150at 658.687 kb on - strand, within ABIE41_RS03150at 658.687 kb on - strand, within ABIE41_RS03150at 658.687 kb on - strand, within ABIE41_RS03150at 658.687 kb on - strand, within ABIE41_RS03150at 659.085 kb on + strand, within ABIE41_RS03150at 659.085 kb on + strand, within ABIE41_RS03150at 659.085 kb on + strand, within ABIE41_RS03150at 659.086 kb on - strand, within ABIE41_RS03150at 659.086 kb on - strand, within ABIE41_RS03150at 659.086 kb on - strand, within ABIE41_RS03150at 659.101 kb on - strand, within ABIE41_RS03150at 659.101 kb on - strand, within ABIE41_RS03150at 659.164 kb on - strandat 659.164 kb on - strandat 659.164 kb on - strandat 659.341 kb on + strandat 659.341 kb on + strandat 659.342 kb on - strandat 659.342 kb on - strandat 659.342 kb on - strandat 659.344 kb on - strandat 659.358 kb on + strandat 659.358 kb on + strandat 659.359 kb on - strandat 659.579 kb on - strandat 659.878 kb on + strand, within ABIE41_RS03155at 659.879 kb on - strand, within ABIE41_RS03155at 659.989 kb on + strand, within ABIE41_RS03155at 659.989 kb on + strand, within ABIE41_RS03155at 659.990 kb on - strand, within ABIE41_RS03155

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with 1-octen-3-ol 0.493390333333333 mM
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656,314 - ABIE41_RS03145 0.12 +0.2
656,349 + ABIE41_RS03145 0.15 +0.1
656,575 + ABIE41_RS03145 0.39 +0.6
656,575 + ABIE41_RS03145 0.39 -0.1
656,576 - ABIE41_RS03145 0.39 +1.7
656,577 + ABIE41_RS03145 0.39 -1.3
656,577 + ABIE41_RS03145 0.39 +0.2
656,577 + ABIE41_RS03145 0.39 -0.1
656,578 - ABIE41_RS03145 0.39 -0.0
656,578 - ABIE41_RS03145 0.39 -0.7
656,626 - ABIE41_RS03145 0.44 +0.5
656,716 + ABIE41_RS03145 0.54 +0.2
656,716 + ABIE41_RS03145 0.54 -0.3
656,716 + ABIE41_RS03145 0.54 +1.2
656,717 - ABIE41_RS03145 0.54 -1.1
656,717 - ABIE41_RS03145 0.54 +1.7
656,718 + ABIE41_RS03145 0.54 +0.0
656,718 + ABIE41_RS03145 0.54 +0.1
656,718 + ABIE41_RS03145 0.54 +0.9
656,718 + ABIE41_RS03145 0.54 -0.1
656,718 + ABIE41_RS03145 0.54 +0.1
656,719 - ABIE41_RS03145 0.54 +0.6
656,719 - ABIE41_RS03145 0.54 +0.9
656,719 - ABIE41_RS03145 0.54 -0.2
656,913 + ABIE41_RS03145 0.74 -0.6
656,913 + ABIE41_RS03145 0.74 -0.4
656,913 + ABIE41_RS03145 0.74 -0.0
656,913 + ABIE41_RS03145 0.74 -0.3
656,914 - ABIE41_RS03145 0.74 +0.2
656,914 - ABIE41_RS03145 0.74 -0.6
657,258 + -0.7
657,258 + +0.0
657,258 + +0.4
657,762 + ABIE41_RS03150 0.24 -0.3
657,762 + ABIE41_RS03150 0.24 -0.3
658,634 - ABIE41_RS03150 0.66 -0.0
658,634 - ABIE41_RS03150 0.66 +1.2
658,634 - ABIE41_RS03150 0.66 -0.3
658,669 + ABIE41_RS03150 0.67 -0.5
658,669 + ABIE41_RS03150 0.67 +0.0
658,669 + ABIE41_RS03150 0.67 -0.8
658,686 + ABIE41_RS03150 0.68 +0.2
658,686 + ABIE41_RS03150 0.68 +0.6
658,686 + ABIE41_RS03150 0.68 +0.0
658,686 + ABIE41_RS03150 0.68 +0.1
658,686 + ABIE41_RS03150 0.68 +0.9
658,686 + ABIE41_RS03150 0.68 -2.8
658,686 + ABIE41_RS03150 0.68 -0.9
658,687 - ABIE41_RS03150 0.68 +0.7
658,687 - ABIE41_RS03150 0.68 +0.3
658,687 - ABIE41_RS03150 0.68 -0.4
658,687 - ABIE41_RS03150 0.68 -0.4
658,687 - ABIE41_RS03150 0.68 -0.3
658,687 - ABIE41_RS03150 0.68 -0.4
658,687 - ABIE41_RS03150 0.68 -0.7
658,687 - ABIE41_RS03150 0.68 -0.1
658,687 - ABIE41_RS03150 0.68 -0.8
658,687 - ABIE41_RS03150 0.68 -1.8
659,085 + ABIE41_RS03150 0.87 -0.3
659,085 + ABIE41_RS03150 0.87 -0.2
659,085 + ABIE41_RS03150 0.87 +0.9
659,086 - ABIE41_RS03150 0.87 +0.2
659,086 - ABIE41_RS03150 0.87 +0.2
659,086 - ABIE41_RS03150 0.87 -0.9
659,101 - ABIE41_RS03150 0.88 +1.4
659,101 - ABIE41_RS03150 0.88 -0.3
659,164 - -0.2
659,164 - +1.7
659,164 - +0.7
659,341 + +0.1
659,341 + +0.6
659,342 - -0.0
659,342 - -0.8
659,342 - +0.1
659,344 - -0.7
659,358 + +0.4
659,358 + +1.0
659,359 - +1.4
659,579 - +1.0
659,878 + ABIE41_RS03155 0.28 +0.5
659,879 - ABIE41_RS03155 0.28 -0.5
659,989 + ABIE41_RS03155 0.35 -0.1
659,989 + ABIE41_RS03155 0.35 -1.6
659,990 - ABIE41_RS03155 0.35 -0.1

Or see this region's nucleotide sequence