Strain Fitness in Pseudomonas sp. RS175 around PFR28_02504

Experiment: sn-glycero-3-phosphocholine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sn-glycero-3-phosphocholine (C)
2,976,116	-		PFR28_02503	0.29	+1.3
2,976,141	-		PFR28_02503	0.32	+0.5
2,976,141	-		PFR28_02503	0.32	-2.5
2,976,141	-		PFR28_02503	0.32	-1.0
2,976,141	-		PFR28_02503	0.32	+0.1
2,976,157	+		PFR28_02503	0.34	-3.0
2,976,157	+		PFR28_02503	0.34	+1.1
2,976,157	+		PFR28_02503	0.34	-0.5
2,976,157	+		PFR28_02503	0.34	-2.4
2,976,158	-		PFR28_02503	0.34	+0.9
2,976,158	-		PFR28_02503	0.34	+0.9
2,976,161	+		PFR28_02503	0.35	-1.2
2,976,161	+		PFR28_02503	0.35	+0.3
2,976,161	+		PFR28_02503	0.35	-1.4
2,976,161	+		PFR28_02503	0.35	+2.0
2,976,162	-		PFR28_02503	0.35	+1.1
2,976,162	-		PFR28_02503	0.35	-0.3
2,976,207	-		PFR28_02503	0.41	+0.5
2,976,252	-		PFR28_02503	0.47	+1.0
2,976,252	-		PFR28_02503	0.47	+1.2
2,976,310	+		PFR28_02503	0.55	-0.2
2,976,310	+		PFR28_02503	0.55	+0.2
2,976,310	+		PFR28_02503	0.55	-0.9
2,976,310	+		PFR28_02503	0.55	+1.2
2,976,310	+		PFR28_02503	0.55	+0.8
2,976,310	+		PFR28_02503	0.55	+1.3
2,976,310	+		PFR28_02503	0.55	+0.3
2,976,310	+		PFR28_02503	0.55	+0.3
2,976,310	+		PFR28_02503	0.55	-0.5
2,976,310	+		PFR28_02503	0.55	-2.2
2,976,310	+		PFR28_02503	0.55	-1.2
2,976,310	+		PFR28_02503	0.55	-0.7
2,976,310	+		PFR28_02503	0.55	+0.3
2,976,310	+		PFR28_02503	0.55	-0.6
2,976,310	+		PFR28_02503	0.55	+1.2
2,976,310	+		PFR28_02503	0.55	-0.5
2,976,310	+		PFR28_02503	0.55	+0.6
2,976,310	+		PFR28_02503	0.55	+0.5
2,976,310	+		PFR28_02503	0.55	-2.2
2,976,310	+		PFR28_02503	0.55	+0.9
2,976,311	-		PFR28_02503	0.55	+0.2
2,976,311	-		PFR28_02503	0.55	-1.8
2,976,311	-		PFR28_02503	0.55	-1.8
2,976,311	-		PFR28_02503	0.55	-1.5
2,976,311	-		PFR28_02503	0.55	-1.6
2,976,311	-		PFR28_02503	0.55	+0.5
2,976,311	-		PFR28_02503	0.55	-1.2
2,976,311	-		PFR28_02503	0.55	-0.7
2,976,311	-		PFR28_02503	0.55	-0.3
2,976,311	-		PFR28_02503	0.55	-3.1
2,976,341	+		PFR28_02503	0.59	-2.9
2,976,342	-		PFR28_02503	0.59	+0.8
2,976,342	-		PFR28_02503	0.59	-0.5
2,976,395	-		PFR28_02503	0.66	+1.8
2,976,395	-		PFR28_02503	0.66	-1.4
2,976,432	-		PFR28_02503	0.71	-0.2
2,976,432	-		PFR28_02503	0.71	-1.7
2,976,433	+		PFR28_02503	0.71	+2.3
2,976,433	+		PFR28_02503	0.71	-0.8
2,976,433	+		PFR28_02503	0.71	+0.7
2,976,433	+		PFR28_02503	0.71	-0.7
2,976,434	-		PFR28_02503	0.71	+0.1
2,976,434	-		PFR28_02503	0.71	+0.6
2,976,454	+		PFR28_02503	0.74	-0.3
2,976,454	+		PFR28_02503	0.74	-1.3
2,976,454	+		PFR28_02503	0.74	-1.5
2,976,455	-		PFR28_02503	0.74	-0.9
2,976,455	-		PFR28_02503	0.74	+0.1
2,976,455	-		PFR28_02503	0.74	+1.5
2,976,754	+				-2.1
2,976,755	-				-0.9
2,976,771	-				+1.3
2,976,823	+				-0.7
2,976,858	+				-3.0
2,976,882	+				+0.9
2,976,999	-		PFR28_02504	0.14	-0.2
2,977,347	+		PFR28_02504	0.64	+0.8
2,977,347	+		PFR28_02504	0.64	+0.1
2,977,348	-		PFR28_02504	0.64	-1.8
2,977,348	-		PFR28_02504	0.64	-0.9
2,977,348	-		PFR28_02504	0.64	+0.9
2,977,457	+		PFR28_02504	0.79	+1.0
2,977,457	+		PFR28_02504	0.79	-0.1
2,977,457	+		PFR28_02504	0.79	+0.1
2,977,458	-		PFR28_02504	0.79	-1.0
2,977,458	-		PFR28_02504	0.79	-1.7
2,977,458	-		PFR28_02504	0.79	-0.0
2,977,598	+				+0.9
2,977,598	+				+0.4
2,977,598	+				-3.1
2,977,599	-				+0.9
2,977,599	-				-1.8
2,977,763	+		PFR28_02505	0.33	-0.2
2,977,763	+		PFR28_02505	0.33	-1.2
2,977,763	+		PFR28_02505	0.33	+0.7
2,977,764	-		PFR28_02505	0.34	-3.4
2,977,764	-		PFR28_02505	0.34	-2.5
2,977,764	-		PFR28_02505	0.34	-2.7
2,977,871	+		PFR28_02505	0.54	-3.0
2,977,871	+		PFR28_02505	0.54	-1.0
2,977,871	+		PFR28_02505	0.54	+0.5
2,977,871	+		PFR28_02505	0.54	+0.6
2,977,871	+		PFR28_02505	0.54	-1.1
2,977,872	-		PFR28_02505	0.54	+0.3
2,977,872	-		PFR28_02505	0.54	-1.2
2,977,872	-		PFR28_02505	0.54	+0.2
2,977,872	-		PFR28_02505	0.54	+0.3
2,977,872	-		PFR28_02505	0.54	-1.4
2,977,872	-		PFR28_02505	0.54	-1.2
2,977,872	-		PFR28_02505	0.54	+1.0
2,978,137	+				+0.1
2,978,137	+				-3.3
2,978,138	-				-1.5
2,978,138	-				-1.8
2,978,138	-				+0.5
2,978,161	+				-0.4
2,978,181	+				+2.8
2,978,181	+				-0.1
2,978,181	+				+0.4
2,978,181	+				+0.8
2,978,181	+				-0.2
2,978,181	+				-2.7
2,978,182	-				-1.6
2,978,182	-				+2.5
2,978,182	-				+2.2
2,978,182	-				+1.7
2,978,182	-				-0.1
2,978,182	-				-2.5
2,978,182	-				-1.7
2,978,182	-				+0.2
2,978,182	-				-0.1
2,978,185	+				-0.5
2,978,185	+				+1.8
2,978,185	+				+0.6
2,978,186	-				+1.1
2,978,186	-				-0.8
2,978,186	-				+0.9
2,978,186	-				-2.3
2,978,287	+				-2.0
2,978,288	-				-0.2
2,978,352	+				+0.2
2,978,352	+				-2.1
2,978,352	+				+0.6
2,978,352	+				-0.2
2,978,352	+				+1.1
2,978,352	+				-0.2
2,978,352	+				-0.9
2,978,352	+				-2.4
2,978,352	+				+0.2
2,978,352	+				-1.8
2,978,352	+				-0.9
2,978,352	+				-0.3
2,978,352	+				-0.6
2,978,352	+				-2.9
2,978,352	+				+0.8
2,978,352	+				-2.0
2,978,352	+				+1.0
2,978,352	+				-1.5
2,978,353	-				-0.9
2,978,353	-				-1.0
2,978,353	-				-1.0
2,978,353	-				-1.8
2,978,353	-				+2.9
2,978,353	-				-0.9
2,978,353	-				+0.7
2,978,353	-				-1.8
2,978,353	-				+1.4
2,978,353	-				+0.5
2,978,353	-				-2.2
2,978,353	-				-3.9
2,978,353	-				+0.3
2,978,353	-				-0.2
2,978,353	-				-2.1
2,978,353	-				+0.6
2,978,353	-				-1.5
2,978,353	-				+1.3
2,978,353	-				-2.7
2,978,368	-				+0.3
2,978,440	+				-1.8
2,978,440	+				-1.5
2,978,440	+				-0.8
2,978,441	-				+1.5
2,978,441	-				-0.7
2,978,441	-				-1.2
2,978,441	-				-1.3
2,978,441	-				+0.5
2,978,441	-				-1.3
2,978,444	+				+1.7
2,978,444	+				+0.5
2,978,444	+				-1.2
2,978,444	+				-0.6
2,978,444	+				+1.1
2,978,444	+				-1.1
2,978,444	+				+0.2
2,978,444	+				-3.5
2,978,444	+				-0.3
2,978,444	+				-0.0
2,978,444	+				+0.8
2,978,444	+				-3.2
2,978,444	+				-2.7
2,978,444	+				+0.7
2,978,444	+				+1.3
2,978,444	+				+0.3
2,978,444	+				+0.1
2,978,444	+				-3.2
2,978,445	-				+0.5
2,978,445	-				+0.2
2,978,445	-				+1.2
2,978,445	-				-1.0
2,978,445	-				-0.8
2,978,445	-				+0.7
2,978,445	-				+0.2
2,978,445	-				+0.3
2,978,445	-				-0.6
2,978,445	-				-1.9
2,978,445	-				+0.7
2,978,445	-				-2.1
2,978,445	-				-2.5
2,978,445	-				-1.5
2,978,445	-				-1.8
2,978,445	-				-1.4
2,978,445	-				+1.9
2,978,445	-				-0.2
2,978,445	-				+0.1
2,978,447	-				+1.3
2,978,525	+		PFR28_02506	0.14	+0.2
2,978,525	+		PFR28_02506	0.14	-1.9
2,978,525	+		PFR28_02506	0.14	-1.7
2,978,525	+		PFR28_02506	0.14	+1.8
2,978,525	+		PFR28_02506	0.14	+1.7
2,978,526	-		PFR28_02506	0.14	+0.5
2,978,526	-		PFR28_02506	0.14	+0.1
2,978,526	-		PFR28_02506	0.14	-0.7
2,978,526	-		PFR28_02506	0.14	-0.8
2,978,526	-		PFR28_02506	0.14	+0.7