Strain Fitness in Bosea sp. OAE506 around ABIE41_RS12635

Experiment: R2A with 1-octen-3-ol 0.542729333333333 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS12630 and ABIE41_RS12635 are separated by 310 nucleotidesABIE41_RS12635 and ABIE41_RS12640 are separated by 141 nucleotides ABIE41_RS12630: ABIE41_RS12630 - cell division protein FtsZ, at 2,589,134 to 2,590,825 _RS12630 ABIE41_RS12635: ABIE41_RS12635 - UDP-3-O-acyl-N-acetylglucosamine deacetylase, at 2,591,136 to 2,592,083 _RS12635 ABIE41_RS12640: ABIE41_RS12640 - outer membrane protein assembly factor BamD, at 2,592,225 to 2,593,166 _RS12640 Position (kb) 2591 2592 2593Strain fitness (log2 ratio) -1 0 1at 2590.851 kb on - strandat 2590.998 kb on + strandat 2590.998 kb on + strandat 2590.998 kb on + strandat 2592.129 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with 1-octen-3-ol 0.542729333333333 mM
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2,590,851 - +0.9
2,590,998 + -0.1
2,590,998 + +0.1
2,590,998 + +0.5
2,592,129 + -0.8

Or see this region's nucleotide sequence