Experiment: R2A with 1-octen-3-ol 0.542729333333333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS04435 and ABIE41_RS04440 overlap by 4 nucleotides ABIE41_RS04440 and ABIE41_RS04445 overlap by 4 nucleotides
ABIE41_RS04435: ABIE41_RS04435 - hypothetical protein, at 923,538 to 924,620
_RS04435
ABIE41_RS04440: ABIE41_RS04440 - GNAT family N-acetyltransferase, at 924,617 to 925,159
_RS04440
ABIE41_RS04445: ABIE41_RS04445 - ATP-dependent protease ATPase subunit HslU, at 925,156 to 926,466
_RS04445
Position (kb) 924
925
926 Strain fitness (log2 ratio) -1
0
1
2 at 923.985 kb on + strand, within ABIE41_RS04435 at 923.986 kb on - strand, within ABIE41_RS04435 at 923.986 kb on - strand, within ABIE41_RS04435 at 924.144 kb on + strand, within ABIE41_RS04435 at 924.144 kb on + strand, within ABIE41_RS04435 at 924.144 kb on + strand, within ABIE41_RS04435 at 924.145 kb on - strand, within ABIE41_RS04435 at 924.145 kb on - strand, within ABIE41_RS04435 at 924.145 kb on - strand, within ABIE41_RS04435 at 924.145 kb on - strand, within ABIE41_RS04435 at 924.145 kb on - strand, within ABIE41_RS04435 at 924.145 kb on - strand, within ABIE41_RS04435 at 924.145 kb on - strand, within ABIE41_RS04435 at 924.426 kb on + strand, within ABIE41_RS04435 at 924.426 kb on + strand, within ABIE41_RS04435 at 924.426 kb on + strand, within ABIE41_RS04435 at 924.427 kb on - strand, within ABIE41_RS04435 at 924.427 kb on - strand, within ABIE41_RS04435 at 924.447 kb on + strand, within ABIE41_RS04435 at 924.824 kb on + strand, within ABIE41_RS04440 at 924.824 kb on + strand, within ABIE41_RS04440 at 924.824 kb on + strand, within ABIE41_RS04440 at 924.825 kb on - strand, within ABIE41_RS04440 at 925.426 kb on + strand, within ABIE41_RS04445 at 925.427 kb on - strand, within ABIE41_RS04445 at 925.427 kb on - strand, within ABIE41_RS04445 at 925.427 kb on - strand, within ABIE41_RS04445 at 925.798 kb on + strand, within ABIE41_RS04445 at 925.799 kb on - strand, within ABIE41_RS04445
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with 1-octen-3-ol 0.542729333333333 mM remove 923,985 + ABIE41_RS04435 0.41 +0.6 923,986 - ABIE41_RS04435 0.41 +1.0 923,986 - ABIE41_RS04435 0.41 +2.2 924,144 + ABIE41_RS04435 0.56 +0.2 924,144 + ABIE41_RS04435 0.56 -0.6 924,144 + ABIE41_RS04435 0.56 -0.2 924,145 - ABIE41_RS04435 0.56 +0.2 924,145 - ABIE41_RS04435 0.56 +0.3 924,145 - ABIE41_RS04435 0.56 -0.4 924,145 - ABIE41_RS04435 0.56 -0.5 924,145 - ABIE41_RS04435 0.56 +0.3 924,145 - ABIE41_RS04435 0.56 -0.9 924,145 - ABIE41_RS04435 0.56 +0.0 924,426 + ABIE41_RS04435 0.82 -0.2 924,426 + ABIE41_RS04435 0.82 -0.5 924,426 + ABIE41_RS04435 0.82 +0.4 924,427 - ABIE41_RS04435 0.82 -0.8 924,427 - ABIE41_RS04435 0.82 -0.3 924,447 + ABIE41_RS04435 0.84 -0.9 924,824 + ABIE41_RS04440 0.38 -0.2 924,824 + ABIE41_RS04440 0.38 -1.7 924,824 + ABIE41_RS04440 0.38 +0.9 924,825 - ABIE41_RS04440 0.38 -0.8 925,426 + ABIE41_RS04445 0.21 +0.6 925,427 - ABIE41_RS04445 0.21 +1.8 925,427 - ABIE41_RS04445 0.21 +0.6 925,427 - ABIE41_RS04445 0.21 -0.8 925,798 + ABIE41_RS04445 0.49 -0.1 925,799 - ABIE41_RS04445 0.49 -0.8
Or see this region's nucleotide sequence