Strain Fitness in Bosea sp. OAE506 around ABIE41_RS11885

Experiment: R2A with 1-octen-3-ol 0.542729333333333 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS11880 and ABIE41_RS11885 are separated by 144 nucleotidesABIE41_RS11885 and ABIE41_RS11890 are separated by 71 nucleotides ABIE41_RS11880: ABIE41_RS11880 - LysR family transcriptional regulator, at 2,429,009 to 2,429,899 _RS11880 ABIE41_RS11885: ABIE41_RS11885 - thioredoxin-disulfide reductase, at 2,430,044 to 2,431,009 _RS11885 ABIE41_RS11890: ABIE41_RS11890 - mitochondrial fission ELM1 family protein, at 2,431,081 to 2,432,064 _RS11890 Position (kb) 2430 2431 2432Strain fitness (log2 ratio) -1 0 1at 2429.973 kb on - strandat 2431.040 kb on - strandat 2431.110 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with 1-octen-3-ol 0.542729333333333 mM
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2,429,973 - -0.2
2,431,040 - -1.1
2,431,110 + +0.2

Or see this region's nucleotide sequence