Strain Fitness in Bosea sp. OAE506 around ABIE41_RS19755

Experiment: R2A with 1-octen-3-ol 0.603032666666667 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS19745 and ABIE41_RS19750 overlap by 4 nucleotidesABIE41_RS19750 and ABIE41_RS19755 are separated by 35 nucleotidesABIE41_RS19755 and ABIE41_RS19760 overlap by 1 nucleotides ABIE41_RS19745: ABIE41_RS19745 - transcription antitermination factor NusB, at 4,055,203 to 4,055,700 _RS19745 ABIE41_RS19750: ABIE41_RS19750 - 6,7-dimethyl-8-ribityllumazine synthase, at 4,055,697 to 4,056,207 _RS19750 ABIE41_RS19755: ABIE41_RS19755 - riboflavin synthase, at 4,056,243 to 4,056,890 _RS19755 ABIE41_RS19760: ABIE41_RS19760 - bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD, at 4,056,890 to 4,058,035 _RS19760 Position (kb) 4056 4057Strain fitness (log2 ratio) -1 0 1 2at 4056.245 kb on - strandat 4056.245 kb on - strandat 4056.245 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with 1-octen-3-ol 0.603032666666667 mM
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4,056,245 - -0.6
4,056,245 - +2.2
4,056,245 - -0.5

Or see this region's nucleotide sequence