Strain Fitness in Bosea sp. OAE506 around ABIE41_RS16155

Experiment: R2A with 6-Pentyl-2H-pyran-2-one 0.2709965 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS16150 and ABIE41_RS16155 are separated by 132 nucleotidesABIE41_RS16155 and ABIE41_RS16160 are separated by 636 nucleotides ABIE41_RS16150: ABIE41_RS16150 - penicillin-binding protein 1A, at 3,309,336 to 3,311,783 _RS16150 ABIE41_RS16155: ABIE41_RS16155 - N-acetylmuramoyl-L-alanine amidase, at 3,311,916 to 3,313,196 _RS16155 ABIE41_RS16160: ABIE41_RS16160 - ribonuclease E/G, at 3,313,833 to 3,316,586 _RS16160 Position (kb) 3311 3312 3313 3314Strain fitness (log2 ratio) -2 -1 0 1at 3311.077 kb on + strand, within ABIE41_RS16150at 3311.077 kb on + strand, within ABIE41_RS16150at 3311.228 kb on - strand, within ABIE41_RS16150at 3311.276 kb on - strand, within ABIE41_RS16150at 3311.501 kb on - strand, within ABIE41_RS16150at 3311.969 kb on - strandat 3311.969 kb on - strandat 3311.969 kb on - strandat 3312.058 kb on + strand, within ABIE41_RS16155at 3312.059 kb on - strand, within ABIE41_RS16155at 3312.059 kb on - strand, within ABIE41_RS16155at 3312.129 kb on + strand, within ABIE41_RS16155at 3312.129 kb on + strand, within ABIE41_RS16155at 3312.129 kb on + strand, within ABIE41_RS16155at 3312.130 kb on - strand, within ABIE41_RS16155at 3312.249 kb on - strand, within ABIE41_RS16155at 3312.249 kb on - strand, within ABIE41_RS16155at 3312.344 kb on + strand, within ABIE41_RS16155at 3312.345 kb on - strand, within ABIE41_RS16155at 3312.345 kb on - strand, within ABIE41_RS16155at 3312.347 kb on - strand, within ABIE41_RS16155at 3312.347 kb on - strand, within ABIE41_RS16155at 3312.347 kb on - strand, within ABIE41_RS16155at 3313.245 kb on + strandat 3313.245 kb on + strandat 3313.246 kb on - strandat 3313.246 kb on - strandat 3313.246 kb on - strandat 3313.347 kb on + strandat 3313.828 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with 6-Pentyl-2H-pyran-2-one 0.2709965 mM
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3,311,077 + ABIE41_RS16150 0.71 +0.1
3,311,077 + ABIE41_RS16150 0.71 -2.5
3,311,228 - ABIE41_RS16150 0.77 -0.9
3,311,276 - ABIE41_RS16150 0.79 -2.4
3,311,501 - ABIE41_RS16150 0.88 -1.9
3,311,969 - +0.3
3,311,969 - -1.1
3,311,969 - -0.2
3,312,058 + ABIE41_RS16155 0.11 +0.6
3,312,059 - ABIE41_RS16155 0.11 -1.7
3,312,059 - ABIE41_RS16155 0.11 -0.2
3,312,129 + ABIE41_RS16155 0.17 -0.6
3,312,129 + ABIE41_RS16155 0.17 +0.1
3,312,129 + ABIE41_RS16155 0.17 -0.6
3,312,130 - ABIE41_RS16155 0.17 +0.1
3,312,249 - ABIE41_RS16155 0.26 -0.6
3,312,249 - ABIE41_RS16155 0.26 -0.7
3,312,344 + ABIE41_RS16155 0.33 -0.8
3,312,345 - ABIE41_RS16155 0.33 +0.2
3,312,345 - ABIE41_RS16155 0.33 -0.5
3,312,347 - ABIE41_RS16155 0.34 +0.0
3,312,347 - ABIE41_RS16155 0.34 -0.4
3,312,347 - ABIE41_RS16155 0.34 -0.5
3,313,245 + +0.0
3,313,245 + -0.4
3,313,246 - +1.7
3,313,246 - -0.7
3,313,246 - +0.2
3,313,347 + +0.6
3,313,828 + -0.6

Or see this region's nucleotide sequence