Strain Fitness in Bosea sp. OAE506 around ABIE41_RS05675

Experiment: R2A with 6-Pentyl-2H-pyran-2-one 0.2709965 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 6-Pentyl-2H-pyran-2-one 0.2709965 mM
1,165,267	+		ABIE41_RS05670	0.42	+0.3
1,165,268	-		ABIE41_RS05670	0.42	-0.2
1,165,304	+		ABIE41_RS05670	0.45	-0.1
1,165,304	+		ABIE41_RS05670	0.45	+1.7
1,165,304	+		ABIE41_RS05670	0.45	+0.2
1,165,304	+		ABIE41_RS05670	0.45	+0.3
1,165,304	+		ABIE41_RS05670	0.45	+0.3
1,165,304	+		ABIE41_RS05670	0.45	+0.0
1,165,304	+		ABIE41_RS05670	0.45	+0.6
1,165,304	+		ABIE41_RS05670	0.45	+0.3
1,165,305	-		ABIE41_RS05670	0.45	+0.8
1,165,305	-		ABIE41_RS05670	0.45	+1.1
1,165,305	-		ABIE41_RS05670	0.45	+0.1
1,165,386	+		ABIE41_RS05670	0.53	-1.5
1,165,386	+		ABIE41_RS05670	0.53	-0.5
1,165,386	+		ABIE41_RS05670	0.53	-1.2
1,165,459	+		ABIE41_RS05670	0.59	-0.9
1,165,459	+		ABIE41_RS05670	0.59	-1.2
1,165,460	-		ABIE41_RS05670	0.59	-1.1
1,165,460	-		ABIE41_RS05670	0.59	+1.4
1,165,600	+		ABIE41_RS05670	0.72	-1.5
1,165,600	+		ABIE41_RS05670	0.72	-0.2
1,165,600	+		ABIE41_RS05670	0.72	-0.1
1,165,600	+		ABIE41_RS05670	0.72	-0.5
1,165,600	+		ABIE41_RS05670	0.72	-2.2
1,165,600	+		ABIE41_RS05670	0.72	+0.4
1,165,648	+		ABIE41_RS05670	0.76	-0.5
1,165,648	+		ABIE41_RS05670	0.76	-0.9
1,165,648	+		ABIE41_RS05670	0.76	+0.0
1,165,648	+		ABIE41_RS05670	0.76	-1.1
1,165,648	+		ABIE41_RS05670	0.76	+0.4
1,165,648	+		ABIE41_RS05670	0.76	+0.0
1,165,649	-		ABIE41_RS05670	0.76	+0.3
1,165,649	-		ABIE41_RS05670	0.76	-0.0
1,165,669	+		ABIE41_RS05670	0.78	-0.4
1,165,670	-		ABIE41_RS05670	0.78	-1.5
1,165,670	-		ABIE41_RS05670	0.78	-0.2
1,165,670	-		ABIE41_RS05670	0.78	-0.4
1,165,670	-		ABIE41_RS05670	0.78	-1.1
1,165,682	+		ABIE41_RS05670	0.79	-0.4
1,165,682	+		ABIE41_RS05670	0.79	+1.7
1,165,683	-		ABIE41_RS05670	0.79	-1.1
1,165,683	-		ABIE41_RS05670	0.79	-0.0
1,165,683	-		ABIE41_RS05670	0.79	+0.4
1,165,700	-		ABIE41_RS05670	0.80	+1.0
1,165,786	+		ABIE41_RS05670	0.88	+2.5
1,165,786	+		ABIE41_RS05670	0.88	-0.8
1,165,786	+		ABIE41_RS05670	0.88	-2.1
1,165,786	+		ABIE41_RS05670	0.88	+0.7
1,165,787	-		ABIE41_RS05670	0.88	-0.3
1,165,787	-		ABIE41_RS05670	0.88	-0.3
1,165,832	-				-0.5
1,165,951	+				+0.1
1,165,956	+				+0.7
1,165,956	+				-0.4
1,165,956	+				-0.1
1,165,956	+				-0.7
1,165,957	-				-0.3
1,165,957	-				+0.4
1,165,957	-				+0.1
1,165,979	-				-2.0
1,166,056	+				-1.3
1,166,057	-				-0.8
1,166,062	+				+0.1
1,166,062	+				-0.5
1,166,062	+				+0.2
1,166,062	+				+0.0
1,166,063	-				-0.3
1,166,063	-				-0.5
1,166,127	-				+0.3
1,166,176	-				+0.4
1,166,176	-				+0.5
1,166,176	-				+0.1
1,166,176	-				-0.2
1,166,176	-				-0.3
1,166,176	-				+0.2
1,166,176	-				-0.7
1,166,176	-				+0.4
1,166,176	-				+0.4
1,166,226	+				+0.2
1,166,226	+				+1.1
1,166,238	+				+0.2
1,166,238	+				+1.7
1,166,238	+				+0.1
1,166,239	-				-0.5
1,166,239	-				-0.1
1,166,310	+				-0.6
1,166,320	+				-0.4
1,166,320	+				-0.5
1,166,321	-				-0.6
1,166,334	+				-0.5
1,166,334	+				+0.3
1,166,334	+				-1.3
1,166,334	+				-1.4
1,166,391	+		ABIE41_RS05675	0.12	+0.5
1,166,391	+		ABIE41_RS05675	0.12	-2.6
1,166,391	+		ABIE41_RS05675	0.12	-0.5
1,166,391	+		ABIE41_RS05675	0.12	-1.0
1,166,392	-		ABIE41_RS05675	0.12	-0.1
1,166,392	-		ABIE41_RS05675	0.12	+0.4
1,166,392	-		ABIE41_RS05675	0.12	+0.1
1,166,393	+		ABIE41_RS05675	0.12	-1.4
1,166,393	+		ABIE41_RS05675	0.12	-0.4
1,166,394	-		ABIE41_RS05675	0.12	+1.7
1,166,394	-		ABIE41_RS05675	0.12	-0.9
1,166,394	-		ABIE41_RS05675	0.12	-0.7
1,166,496	+		ABIE41_RS05675	0.17	+0.1
1,166,496	+		ABIE41_RS05675	0.17	+0.4
1,166,496	+		ABIE41_RS05675	0.17	-0.1
1,166,496	+		ABIE41_RS05675	0.17	+3.7
1,166,497	-		ABIE41_RS05675	0.17	+0.9
1,166,568	+		ABIE41_RS05675	0.21	-0.5
1,166,568	+		ABIE41_RS05675	0.21	+0.3
1,166,568	+		ABIE41_RS05675	0.21	+1.7
1,166,568	+		ABIE41_RS05675	0.21	-0.5
1,166,568	+		ABIE41_RS05675	0.21	+2.2
1,166,568	+		ABIE41_RS05675	0.21	-0.1
1,166,569	-		ABIE41_RS05675	0.21	-0.2
1,166,569	-		ABIE41_RS05675	0.21	+0.8
1,166,569	-		ABIE41_RS05675	0.21	-0.8
1,166,569	-		ABIE41_RS05675	0.21	-0.4
1,166,569	-		ABIE41_RS05675	0.21	-0.8
1,166,569	-		ABIE41_RS05675	0.21	-1.1
1,166,569	-		ABIE41_RS05675	0.21	-1.3
1,166,596	-		ABIE41_RS05675	0.22	-0.9
1,166,862	+		ABIE41_RS05675	0.36	-0.2
1,166,862	+		ABIE41_RS05675	0.36	+0.2
1,166,863	-		ABIE41_RS05675	0.36	-0.2
1,166,940	+		ABIE41_RS05675	0.40	-2.4
1,166,941	-		ABIE41_RS05675	0.40	-0.6
1,166,941	-		ABIE41_RS05675	0.40	-2.1
1,166,941	-		ABIE41_RS05675	0.40	+0.4
1,166,977	+		ABIE41_RS05675	0.42	-0.3
1,166,977	+		ABIE41_RS05675	0.42	+0.2
1,166,978	-		ABIE41_RS05675	0.42	-0.2
1,166,978	-		ABIE41_RS05675	0.42	-0.6
1,166,994	+		ABIE41_RS05675	0.43	-0.8
1,166,994	+		ABIE41_RS05675	0.43	+0.6
1,166,995	-		ABIE41_RS05675	0.43	+0.8
1,167,003	+		ABIE41_RS05675	0.43	-0.1
1,167,024	+		ABIE41_RS05675	0.44	+0.9
1,167,024	+		ABIE41_RS05675	0.44	-0.1
1,167,024	+		ABIE41_RS05675	0.44	-1.0
1,167,024	+		ABIE41_RS05675	0.44	+0.6
1,167,024	+		ABIE41_RS05675	0.44	-0.9
1,167,024	+		ABIE41_RS05675	0.44	-0.5
1,167,025	-		ABIE41_RS05675	0.44	-0.3
1,167,025	-		ABIE41_RS05675	0.44	-0.5
1,167,025	-		ABIE41_RS05675	0.44	+0.4
1,167,036	+		ABIE41_RS05675	0.45	+0.4
1,167,036	+		ABIE41_RS05675	0.45	-0.3
1,167,054	+		ABIE41_RS05675	0.46	-0.2
1,167,054	+		ABIE41_RS05675	0.46	-1.2
1,167,054	+		ABIE41_RS05675	0.46	+0.2
1,167,054	+		ABIE41_RS05675	0.46	-0.3
1,167,054	+		ABIE41_RS05675	0.46	+0.2
1,167,054	+		ABIE41_RS05675	0.46	+0.6
1,167,055	-		ABIE41_RS05675	0.46	-1.3
1,167,055	-		ABIE41_RS05675	0.46	+0.6
1,167,055	-		ABIE41_RS05675	0.46	-1.2
1,167,055	-		ABIE41_RS05675	0.46	+0.2
1,167,055	-		ABIE41_RS05675	0.46	-0.1
1,167,055	-		ABIE41_RS05675	0.46	-0.3
1,167,096	+		ABIE41_RS05675	0.48	+0.2
1,167,096	+		ABIE41_RS05675	0.48	-0.5
1,167,096	+		ABIE41_RS05675	0.48	-1.7
1,167,096	+		ABIE41_RS05675	0.48	+0.1
1,167,096	+		ABIE41_RS05675	0.48	-0.2
1,167,097	-		ABIE41_RS05675	0.48	-0.7
1,167,097	-		ABIE41_RS05675	0.48	+0.7
1,167,097	-		ABIE41_RS05675	0.48	-0.3
1,167,097	-		ABIE41_RS05675	0.48	+1.4
1,167,097	-		ABIE41_RS05675	0.48	+1.7
1,167,097	-		ABIE41_RS05675	0.48	+0.8
1,167,097	-		ABIE41_RS05675	0.48	+0.5
1,167,097	-		ABIE41_RS05675	0.48	-1.2
1,167,097	-		ABIE41_RS05675	0.48	-0.1
1,167,097	-		ABIE41_RS05675	0.48	-0.9
1,167,159	+		ABIE41_RS05675	0.51	+0.3
1,167,159	+		ABIE41_RS05675	0.51	+0.2
1,167,159	+		ABIE41_RS05675	0.51	+0.4
1,167,159	+		ABIE41_RS05675	0.51	+0.8
1,167,160	-		ABIE41_RS05675	0.51	-0.4
1,167,216	+		ABIE41_RS05675	0.54	+0.7
1,167,216	+		ABIE41_RS05675	0.54	-0.5
1,167,217	-		ABIE41_RS05675	0.54	-1.0
1,167,217	-		ABIE41_RS05675	0.54	-0.3
1,167,217	-		ABIE41_RS05675	0.54	-0.1
1,167,345	+		ABIE41_RS05675	0.61	-2.0
1,167,345	+		ABIE41_RS05675	0.61	-0.4
1,167,345	+		ABIE41_RS05675	0.61	-1.2
1,167,345	+		ABIE41_RS05675	0.61	-0.6
1,167,345	+		ABIE41_RS05675	0.61	+0.7
1,167,346	-		ABIE41_RS05675	0.61	-0.6
1,167,346	-		ABIE41_RS05675	0.61	+0.0
1,167,346	-		ABIE41_RS05675	0.61	-1.6
1,167,346	-		ABIE41_RS05675	0.61	-0.9
1,167,585	+		ABIE41_RS05675	0.73	-1.5
1,167,585	+		ABIE41_RS05675	0.73	-0.9
1,167,586	-		ABIE41_RS05675	0.73	+3.3
1,167,586	-		ABIE41_RS05675	0.73	+0.3
1,167,615	+		ABIE41_RS05675	0.75	+0.6
1,167,615	+		ABIE41_RS05675	0.75	-0.2
1,167,615	+		ABIE41_RS05675	0.75	-0.3
1,167,616	-		ABIE41_RS05675	0.75	-0.0
1,167,616	-		ABIE41_RS05675	0.75	-0.1
1,167,627	+		ABIE41_RS05675	0.75	-0.4
1,167,627	+		ABIE41_RS05675	0.75	+0.4
1,167,627	+		ABIE41_RS05675	0.75	-1.0
1,167,639	+		ABIE41_RS05675	0.76	-2.8
1,167,639	+		ABIE41_RS05675	0.76	+0.7
1,167,639	+		ABIE41_RS05675	0.76	-0.7
1,167,640	-		ABIE41_RS05675	0.76	-0.9
1,167,640	-		ABIE41_RS05675	0.76	-0.2
1,167,640	-		ABIE41_RS05675	0.76	-1.1
1,167,640	-		ABIE41_RS05675	0.76	+0.4
1,167,679	-		ABIE41_RS05675	0.78	+0.4
1,167,679	-		ABIE41_RS05675	0.78	+0.6
1,167,831	+		ABIE41_RS05675	0.86	-0.8
1,167,831	+		ABIE41_RS05675	0.86	+0.0
1,167,831	+		ABIE41_RS05675	0.86	-0.3
1,167,831	+		ABIE41_RS05675	0.86	-0.4
1,167,831	+		ABIE41_RS05675	0.86	+0.0
1,167,831	+		ABIE41_RS05675	0.86	+0.0
1,167,831	+		ABIE41_RS05675	0.86	+0.0
1,167,831	+		ABIE41_RS05675	0.86	-0.1
1,167,832	-		ABIE41_RS05675	0.86	+1.0
1,167,832	-		ABIE41_RS05675	0.86	-2.9
1,167,832	-		ABIE41_RS05675	0.86	+1.0
1,167,832	-		ABIE41_RS05675	0.86	+0.4
1,167,832	-		ABIE41_RS05675	0.86	-0.5
1,167,832	-		ABIE41_RS05675	0.86	+0.6
1,167,832	-		ABIE41_RS05675	0.86	-0.5
1,167,832	-		ABIE41_RS05675	0.86	-0.1
1,167,837	+		ABIE41_RS05675	0.86	-0.1
1,167,837	+		ABIE41_RS05675	0.86	+0.1
1,167,837	+		ABIE41_RS05675	0.86	-0.1
1,167,837	+		ABIE41_RS05675	0.86	+0.0
1,167,837	+		ABIE41_RS05675	0.86	+0.4
1,167,837	+		ABIE41_RS05675	0.86	-0.3
1,167,837	+		ABIE41_RS05675	0.86	-1.7
1,167,838	-		ABIE41_RS05675	0.86	-0.9
1,167,838	-		ABIE41_RS05675	0.86	-0.1
1,167,838	-		ABIE41_RS05675	0.86	-1.3
1,167,838	-		ABIE41_RS05675	0.86	-0.2
1,167,838	-		ABIE41_RS05675	0.86	+1.3
1,167,897	+		ABIE41_RS05675	0.89	-0.4
1,167,897	+		ABIE41_RS05675	0.89	-1.2
1,167,897	+		ABIE41_RS05675	0.89	-1.1
1,167,897	+		ABIE41_RS05675	0.89	-0.2
1,167,898	-		ABIE41_RS05675	0.89	-2.6
1,167,898	-		ABIE41_RS05675	0.89	+0.3
1,167,937	+				-1.7
1,167,937	+				-0.1
1,167,938	-				+0.9
1,167,938	-				+1.3
1,167,938	-				-1.2
1,167,938	-				+1.2
1,168,037	+				-1.2
1,168,038	-				-0.4
1,168,429	+		ABIE41_RS05680	0.84	+0.0
1,168,430	-		ABIE41_RS05680	0.84	+1.7
1,168,430	-		ABIE41_RS05680	0.84	+1.1
1,168,519	+				+0.1
1,168,519	+				+0.7
1,168,519	+				-3.2
1,168,519	+				+1.1
1,168,520	-				-1.4
1,168,520	-				-0.1
1,168,520	-				+0.3
1,168,520	-				-0.5
1,168,520	-				+0.4
1,168,520	-				+0.2
1,168,558	+				+0.9
1,168,558	+				+0.3
1,168,558	+				-1.5
1,168,559	-				-0.5
1,168,702	+		ABIE41_RS05685	0.22	-0.3
1,168,703	-		ABIE41_RS05685	0.22	-0.1
1,168,703	-		ABIE41_RS05685	0.22	+0.2
1,168,703	-		ABIE41_RS05685	0.22	+1.0
1,168,703	-		ABIE41_RS05685	0.22	-0.3
1,168,723	+		ABIE41_RS05685	0.24	-0.2
1,168,723	+		ABIE41_RS05685	0.24	-1.4
1,168,723	+		ABIE41_RS05685	0.24	+0.4
1,168,723	+		ABIE41_RS05685	0.24	-0.2
1,168,723	+		ABIE41_RS05685	0.24	+0.2
1,168,724	-		ABIE41_RS05685	0.24	-0.2
1,168,724	-		ABIE41_RS05685	0.24	-1.1
1,168,724	-		ABIE41_RS05685	0.24	-0.5
1,168,724	-		ABIE41_RS05685	0.24	-0.3
1,168,753	+		ABIE41_RS05685	0.27	-1.2
1,168,850	-		ABIE41_RS05685	0.38	-1.2
1,168,850	-		ABIE41_RS05685	0.38	+0.7
1,168,850	-		ABIE41_RS05685	0.38	-0.3
1,168,885	+		ABIE41_RS05685	0.41	+0.2
1,168,886	-		ABIE41_RS05685	0.41	+0.1
1,168,886	-		ABIE41_RS05685	0.41	+0.3
1,168,927	+		ABIE41_RS05685	0.46	-0.2
1,168,928	-		ABIE41_RS05685	0.46	+1.3
1,168,928	-		ABIE41_RS05685	0.46	-0.3