Experiment: Control_TnB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00557 and ECD_00558 are separated by 110 nucleotides ECD_00558 and ECD_00559 are separated by 3 nucleotides
ECD_00557: ECD_00557 - ferrienterobactin ABC transporter permease, at 581,672 to 582,676
_00557
ECD_00558: ECD_00558 - enterobactin exporter, iron-regulated, at 582,787 to 584,037
_00558
ECD_00559: ECD_00559 - ferrienterobactin ABC transporter periplasmic binding protein, at 584,041 to 584,997
_00559
Position (kb) 582
583
584
585 Strain fitness (log2 ratio) -2
-1
0
1 at 582.692 kb on - strand at 582.733 kb on - strand at 582.867 kb on + strand at 583.130 kb on + strand, within ECD_00558 at 583.131 kb on - strand, within ECD_00558 at 583.289 kb on + strand, within ECD_00558 at 583.321 kb on + strand, within ECD_00558 at 583.350 kb on + strand, within ECD_00558 at 583.350 kb on + strand, within ECD_00558 at 583.350 kb on + strand, within ECD_00558 at 583.635 kb on + strand, within ECD_00558 at 583.636 kb on - strand, within ECD_00558 at 583.636 kb on - strand, within ECD_00558 at 583.636 kb on - strand, within ECD_00558 at 583.636 kb on - strand, within ECD_00558 at 583.783 kb on + strand, within ECD_00558 at 584.035 kb on + strand at 584.043 kb on - strand at 584.055 kb on + strand at 584.056 kb on - strand at 584.402 kb on + strand, within ECD_00559 at 584.559 kb on - strand, within ECD_00559 at 584.693 kb on + strand, within ECD_00559 at 584.694 kb on - strand, within ECD_00559 at 584.853 kb on + strand, within ECD_00559 at 584.878 kb on - strand, within ECD_00559 at 584.963 kb on - strand at 585.017 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_TnB remove 582,692 - +1.7 582,733 - +0.1 582,867 + +0.2 583,130 + ECD_00558 0.27 -0.9 583,131 - ECD_00558 0.27 -0.9 583,289 + ECD_00558 0.40 -1.9 583,321 + ECD_00558 0.43 +0.1 583,350 + ECD_00558 0.45 -1.9 583,350 + ECD_00558 0.45 -2.2 583,350 + ECD_00558 0.45 +1.0 583,635 + ECD_00558 0.68 +0.9 583,636 - ECD_00558 0.68 +0.1 583,636 - ECD_00558 0.68 +0.4 583,636 - ECD_00558 0.68 -0.7 583,636 - ECD_00558 0.68 +0.2 583,783 + ECD_00558 0.80 -1.2 584,035 + +1.2 584,043 - -0.1 584,055 + -0.2 584,056 - -0.9 584,402 + ECD_00559 0.38 -0.4 584,559 - ECD_00559 0.54 -0.5 584,693 + ECD_00559 0.68 +0.5 584,694 - ECD_00559 0.68 -0.1 584,853 + ECD_00559 0.85 -0.6 584,878 - ECD_00559 0.87 -0.3 584,963 - -0.5 585,017 - +0.5
Or see this region's nucleotide sequence