Strain Fitness in Escherichia coli BL21 around ECD_00756

Experiment: Bas49

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00754 and ECD_00755 are separated by 35 nucleotidesECD_00755 and ECD_00756 overlap by 1 nucleotidesECD_00756 and ECD_00757 overlap by 4 nucleotidesECD_00757 and ECD_00758 are separated by 132 nucleotides ECD_00754: ECD_00754 - BAX Inhibitor-1 family inner membrane protein, at 804,785 to 805,498 _00754 ECD_00755: ECD_00755 - UPF0104 family inner membrane protein, at 805,534 to 806,490 _00755 ECD_00756: ECD_00756 - cardiolipin synthase 2, at 806,490 to 807,731 _00756 ECD_00757: ECD_00757 - endo/exonuclease/phosphatase family protein, at 807,728 to 808,489 _00757 ECD_00758: ECD_00758 - inner membrane protein, at 808,622 to 809,032 _00758 Position (kb) 806 807 808Strain fitness (log2 ratio) -2 -1 0 1 2 3at 805.512 kb on + strandat 805.512 kb on + strandat 805.524 kb on + strandat 805.677 kb on + strand, within ECD_00755at 805.678 kb on - strand, within ECD_00755at 805.678 kb on - strand, within ECD_00755at 805.678 kb on - strand, within ECD_00755at 805.678 kb on - strand, within ECD_00755at 805.678 kb on - strand, within ECD_00755at 805.759 kb on - strand, within ECD_00755at 805.793 kb on + strand, within ECD_00755at 805.793 kb on + strand, within ECD_00755at 805.996 kb on - strand, within ECD_00755at 806.097 kb on + strand, within ECD_00755at 806.097 kb on + strand, within ECD_00755at 806.307 kb on - strand, within ECD_00755at 806.403 kb on - strandat 806.814 kb on - strand, within ECD_00756at 806.854 kb on - strand, within ECD_00756at 806.915 kb on - strand, within ECD_00756at 806.915 kb on - strand, within ECD_00756at 806.918 kb on + strand, within ECD_00756at 806.918 kb on + strand, within ECD_00756at 806.918 kb on + strand, within ECD_00756at 806.919 kb on - strand, within ECD_00756at 806.919 kb on - strand, within ECD_00756at 806.921 kb on - strand, within ECD_00756at 806.921 kb on - strand, within ECD_00756at 807.257 kb on + strand, within ECD_00756at 807.326 kb on + strand, within ECD_00756at 807.326 kb on + strand, within ECD_00756at 807.327 kb on - strand, within ECD_00756at 807.327 kb on - strand, within ECD_00756at 807.452 kb on - strand, within ECD_00756at 807.670 kb on + strandat 807.673 kb on + strandat 807.674 kb on - strandat 807.722 kb on + strandat 807.723 kb on - strandat 807.828 kb on + strand, within ECD_00757at 807.829 kb on - strand, within ECD_00757at 807.829 kb on - strand, within ECD_00757at 807.845 kb on + strand, within ECD_00757at 808.068 kb on - strand, within ECD_00757at 808.171 kb on - strand, within ECD_00757at 808.224 kb on + strand, within ECD_00757at 808.226 kb on + strand, within ECD_00757at 808.227 kb on - strand, within ECD_00757at 808.282 kb on - strand, within ECD_00757at 808.490 kb on - strandat 808.692 kb on + strand, within ECD_00758

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas49
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805,512 + +2.4
805,512 + +1.4
805,524 + +0.7
805,677 + ECD_00755 0.15 -2.1
805,678 - ECD_00755 0.15 +2.1
805,678 - ECD_00755 0.15 +0.9
805,678 - ECD_00755 0.15 -1.1
805,678 - ECD_00755 0.15 +1.3
805,678 - ECD_00755 0.15 +0.9
805,759 - ECD_00755 0.24 +1.4
805,793 + ECD_00755 0.27 +1.7
805,793 + ECD_00755 0.27 +0.8
805,996 - ECD_00755 0.48 -1.1
806,097 + ECD_00755 0.59 +1.1
806,097 + ECD_00755 0.59 -1.5
806,307 - ECD_00755 0.81 +1.2
806,403 - +2.9
806,814 - ECD_00756 0.26 -1.6
806,854 - ECD_00756 0.29 +2.0
806,915 - ECD_00756 0.34 +0.3
806,915 - ECD_00756 0.34 -0.3
806,918 + ECD_00756 0.34 +1.5
806,918 + ECD_00756 0.34 -0.1
806,918 + ECD_00756 0.34 +2.3
806,919 - ECD_00756 0.35 -1.3
806,919 - ECD_00756 0.35 -0.6
806,921 - ECD_00756 0.35 +2.4
806,921 - ECD_00756 0.35 +2.4
807,257 + ECD_00756 0.62 +2.5
807,326 + ECD_00756 0.67 +2.0
807,326 + ECD_00756 0.67 +0.8
807,327 - ECD_00756 0.67 -0.1
807,327 - ECD_00756 0.67 +1.3
807,452 - ECD_00756 0.77 +2.0
807,670 + -0.2
807,673 + -1.4
807,674 - +1.7
807,722 + +0.7
807,723 - +1.5
807,828 + ECD_00757 0.13 +1.7
807,829 - ECD_00757 0.13 +2.8
807,829 - ECD_00757 0.13 +0.5
807,845 + ECD_00757 0.15 +0.9
808,068 - ECD_00757 0.45 -0.9
808,171 - ECD_00757 0.58 +2.1
808,224 + ECD_00757 0.65 +0.2
808,226 + ECD_00757 0.65 +1.3
808,227 - ECD_00757 0.65 +2.9
808,282 - ECD_00757 0.73 +1.4
808,490 - +0.8
808,692 + ECD_00758 0.17 +0.4

Or see this region's nucleotide sequence