Experiment: HBM-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LU632_RS03335 and LU632_RS03340 are separated by 1 nucleotides LU632_RS03340 and LU632_RS03345 are separated by 99 nucleotides
LU632_RS03335: LU632_RS03335 - ABC transporter ATP-binding protein, at 683,528 to 684,571
_RS03335
LU632_RS03340: LU632_RS03340 - iron ABC transporter permease, at 684,573 to 686,069
_RS03340
LU632_RS03345: LU632_RS03345 - iron ABC transporter substrate-binding protein, at 686,169 to 687,173
_RS03345
Position (kb) 684
685
686
687 Strain fitness (log2 ratio) -2
-1
0
1 at 683.709 kb on - strand, within LU632_RS03335 at 683.738 kb on + strand, within LU632_RS03335 at 683.876 kb on - strand, within LU632_RS03335 at 684.196 kb on - strand, within LU632_RS03335 at 684.367 kb on + strand, within LU632_RS03335 at 684.547 kb on + strand at 684.571 kb on + strand at 684.571 kb on + strand at 684.572 kb on - strand at 684.572 kb on - strand at 684.574 kb on + strand at 684.574 kb on + strand at 684.575 kb on - strand at 684.653 kb on - strand at 684.946 kb on + strand, within LU632_RS03340 at 685.176 kb on + strand, within LU632_RS03340 at 685.446 kb on - strand, within LU632_RS03340 at 685.534 kb on + strand, within LU632_RS03340 at 685.654 kb on + strand, within LU632_RS03340 at 685.787 kb on - strand, within LU632_RS03340 at 685.860 kb on - strand, within LU632_RS03340 at 685.917 kb on - strand, within LU632_RS03340 at 686.069 kb on + strand at 686.302 kb on + strand, within LU632_RS03345 at 686.303 kb on - strand, within LU632_RS03345 at 686.420 kb on + strand, within LU632_RS03345 at 686.456 kb on - strand, within LU632_RS03345 at 686.458 kb on + strand, within LU632_RS03345 at 686.515 kb on + strand, within LU632_RS03345 at 686.521 kb on + strand, within LU632_RS03345 at 686.577 kb on - strand, within LU632_RS03345 at 686.910 kb on - strand, within LU632_RS03345 at 686.910 kb on - strand, within LU632_RS03345 at 686.910 kb on - strand, within LU632_RS03345 at 687.033 kb on - strand, within LU632_RS03345
Per-strain Table
Position Strand Gene LocusTag Fraction HBM-Glucose remove 683,709 - LU632_RS03335 0.17 -0.0 683,738 + LU632_RS03335 0.20 -0.3 683,876 - LU632_RS03335 0.33 +0.6 684,196 - LU632_RS03335 0.64 -0.7 684,367 + LU632_RS03335 0.80 -0.0 684,547 + +0.2 684,571 + +0.1 684,571 + +0.6 684,572 - -0.9 684,572 - +0.4 684,574 + -0.6 684,574 + +0.6 684,575 - +0.6 684,653 - -0.3 684,946 + LU632_RS03340 0.25 +1.0 685,176 + LU632_RS03340 0.40 +0.3 685,446 - LU632_RS03340 0.58 -0.2 685,534 + LU632_RS03340 0.64 -0.3 685,654 + LU632_RS03340 0.72 +0.0 685,787 - LU632_RS03340 0.81 +0.5 685,860 - LU632_RS03340 0.86 +0.2 685,917 - LU632_RS03340 0.90 -0.4 686,069 + -0.1 686,302 + LU632_RS03345 0.13 +0.7 686,303 - LU632_RS03345 0.13 +1.7 686,420 + LU632_RS03345 0.25 +0.1 686,456 - LU632_RS03345 0.29 -2.2 686,458 + LU632_RS03345 0.29 -1.0 686,515 + LU632_RS03345 0.34 +0.5 686,521 + LU632_RS03345 0.35 -0.6 686,577 - LU632_RS03345 0.41 +0.5 686,910 - LU632_RS03345 0.74 +1.1 686,910 - LU632_RS03345 0.74 -0.7 686,910 - LU632_RS03345 0.74 +1.0 687,033 - LU632_RS03345 0.86 -0.4
Or see this region's nucleotide sequence