Experiment: Control_TnA
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02661 and ECD_02662 overlap by 1 nucleotides ECD_02662 and ECD_02663 are separated by 50 nucleotides
ECD_02661: ECD_02661 - cysteine sulfinate desulfinase, at 2,781,617 to 2,782,822
_02661
ECD_02662: ECD_02662 - CsdA-binding activator; Fe-S protein, at 2,782,822 to 2,783,265
_02662
ECD_02663: ECD_02663 - tRNA threonylcarbamoyladenosine dehydratase; sulfur acceptor for CsdA, at 2,783,316 to 2,784,122
_02663
Position (kb)
2782
2783
2784 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2781.840 kb on + strand, within ECD_02661 at 2781.840 kb on + strand, within ECD_02661 at 2781.840 kb on + strand, within ECD_02661 at 2781.841 kb on - strand, within ECD_02661 at 2781.841 kb on - strand, within ECD_02661 at 2781.859 kb on + strand, within ECD_02661 at 2781.860 kb on - strand, within ECD_02661 at 2781.860 kb on - strand, within ECD_02661 at 2781.865 kb on + strand, within ECD_02661 at 2781.917 kb on + strand, within ECD_02661 at 2781.917 kb on + strand, within ECD_02661 at 2781.918 kb on - strand, within ECD_02661 at 2781.952 kb on + strand, within ECD_02661 at 2782.087 kb on + strand, within ECD_02661 at 2782.087 kb on + strand, within ECD_02661 at 2782.165 kb on + strand, within ECD_02661 at 2782.314 kb on - strand, within ECD_02661 at 2782.455 kb on + strand, within ECD_02661 at 2782.455 kb on + strand, within ECD_02661 at 2782.490 kb on + strand, within ECD_02661 at 2782.522 kb on + strand, within ECD_02661 at 2782.528 kb on - strand, within ECD_02661 at 2782.630 kb on + strand, within ECD_02661 at 2782.636 kb on + strand, within ECD_02661 at 2782.659 kb on - strand, within ECD_02661 at 2782.663 kb on + strand, within ECD_02661 at 2782.751 kb on + strand at 2782.751 kb on + strand at 2782.751 kb on + strand at 2782.751 kb on + strand at 2782.751 kb on + strand at 2782.751 kb on + strand at 2782.751 kb on + strand at 2782.753 kb on + strand at 2782.753 kb on + strand at 2782.753 kb on + strand at 2782.753 kb on + strand at 2782.753 kb on + strand at 2782.753 kb on + strand at 2782.753 kb on + strand at 2782.753 kb on + strand at 2782.753 kb on + strand at 2782.753 kb on + strand at 2782.754 kb on - strand at 2782.754 kb on - strand at 2782.754 kb on - strand at 2782.754 kb on - strand at 2782.754 kb on - strand at 2782.754 kb on - strand at 2782.754 kb on - strand at 2782.756 kb on + strand at 2782.756 kb on + strand at 2782.756 kb on + strand at 2782.756 kb on + strand at 2782.757 kb on - strand at 2782.757 kb on - strand at 2782.809 kb on + strand at 2782.809 kb on + strand at 2782.887 kb on + strand, within ECD_02662 at 2782.888 kb on - strand, within ECD_02662 at 2782.888 kb on - strand, within ECD_02662 at 2782.917 kb on + strand, within ECD_02662 at 2782.917 kb on + strand, within ECD_02662 at 2782.918 kb on - strand, within ECD_02662 at 2782.921 kb on + strand, within ECD_02662 at 2782.921 kb on + strand, within ECD_02662 at 2782.921 kb on + strand, within ECD_02662 at 2782.922 kb on - strand, within ECD_02662 at 2782.986 kb on + strand, within ECD_02662 at 2782.987 kb on - strand, within ECD_02662 at 2783.026 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.028 kb on + strand, within ECD_02662 at 2783.029 kb on - strand, within ECD_02662 at 2783.029 kb on - strand, within ECD_02662 at 2783.029 kb on - strand, within ECD_02662 at 2783.029 kb on - strand, within ECD_02662 at 2783.029 kb on - strand, within ECD_02662 at 2783.029 kb on - strand, within ECD_02662 at 2783.029 kb on - strand, within ECD_02662 at 2783.029 kb on - strand, within ECD_02662 at 2783.029 kb on - strand, within ECD_02662 at 2783.029 kb on - strand, within ECD_02662 at 2783.183 kb on + strand, within ECD_02662 at 2783.183 kb on + strand, within ECD_02662 at 2783.184 kb on - strand, within ECD_02662 at 2783.184 kb on - strand, within ECD_02662 at 2783.219 kb on + strand, within ECD_02662 at 2783.219 kb on + strand, within ECD_02662 at 2783.264 kb on - strand at 2783.264 kb on - strand at 2783.489 kb on - strand, within ECD_02663 at 2783.505 kb on - strand, within ECD_02663 at 2783.505 kb on - strand, within ECD_02663 at 2783.538 kb on - strand, within ECD_02663 at 2783.687 kb on + strand, within ECD_02663 at 2783.701 kb on + strand, within ECD_02663 at 2783.702 kb on - strand, within ECD_02663 at 2783.702 kb on - strand, within ECD_02663 at 2783.727 kb on + strand, within ECD_02663 at 2783.728 kb on - strand, within ECD_02663 at 2783.752 kb on + strand, within ECD_02663 at 2783.753 kb on - strand, within ECD_02663 at 2783.759 kb on - strand, within ECD_02663 at 2783.771 kb on + strand, within ECD_02663 at 2783.771 kb on + strand, within ECD_02663 at 2783.772 kb on - strand, within ECD_02663 at 2783.772 kb on - strand, within ECD_02663 at 2783.772 kb on - strand, within ECD_02663 at 2783.772 kb on - strand, within ECD_02663 at 2783.772 kb on - strand, within ECD_02663 at 2783.772 kb on - strand, within ECD_02663 at 2783.772 kb on - strand, within ECD_02663 at 2783.772 kb on - strand, within ECD_02663 at 2783.772 kb on - strand, within ECD_02663 at 2783.772 kb on - strand, within ECD_02663 at 2783.773 kb on + strand, within ECD_02663 at 2783.773 kb on + strand, within ECD_02663 at 2783.774 kb on - strand, within ECD_02663 at 2783.774 kb on - strand, within ECD_02663 at 2783.774 kb on - strand, within ECD_02663 at 2783.774 kb on - strand, within ECD_02663 at 2783.782 kb on - strand, within ECD_02663 at 2783.818 kb on - strand, within ECD_02663 at 2783.834 kb on + strand, within ECD_02663 at 2783.847 kb on - strand, within ECD_02663 at 2783.859 kb on - strand, within ECD_02663 at 2783.916 kb on - strand, within ECD_02663 at 2783.916 kb on - strand, within ECD_02663 at 2784.026 kb on + strand, within ECD_02663 at 2784.026 kb on + strand, within ECD_02663 at 2784.027 kb on - strand, within ECD_02663 at 2784.027 kb on - strand, within ECD_02663 at 2784.027 kb on - strand, within ECD_02663 at 2784.027 kb on - strand, within ECD_02663 at 2784.064 kb on + strand at 2784.065 kb on - strand at 2784.107 kb on + strand at 2784.108 kb on - strand at 2784.108 kb on - strand at 2784.108 kb on - strand at 2784.108 kb on - strand at 2784.108 kb on - strand at 2784.112 kb on - strand at 2784.112 kb on - strand at 2784.112 kb on - strand at 2784.122 kb on + strand at 2784.122 kb on + strand at 2784.122 kb on + strand at 2784.122 kb on + strand at 2784.123 kb on - strand at 2784.123 kb on - strand at 2784.123 kb on - strand at 2784.123 kb on - strand at 2784.123 kb on - strand at 2784.123 kb on - strand at 2784.123 kb on - strand at 2784.123 kb on - strand at 2784.123 kb on - strand at 2784.123 kb on - strand at 2784.123 kb on - strand at 2784.123 kb on - strand at 2784.123 kb on - strand at 2784.123 kb on - strand at 2784.123 kb on - strand at 2784.123 kb on - strand at 2784.123 kb on - strand at 2784.136 kb on + strand at 2784.171 kb on + strand at 2784.194 kb on - strand at 2784.202 kb on + strand at 2784.203 kb on - strand at 2784.203 kb on - strand at 2784.203 kb on - strand at 2784.203 kb on - strand at 2784.206 kb on + strand at 2784.206 kb on + strand at 2784.207 kb on - strand at 2784.219 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_TnA remove 2,781,840 + ECD_02661 0.18 +0.3 2,781,840 + ECD_02661 0.18 +0.1 2,781,840 + ECD_02661 0.18 -1.0 2,781,841 - ECD_02661 0.19 +0.7 2,781,841 - ECD_02661 0.19 -1.0 2,781,859 + ECD_02661 0.20 +0.4 2,781,860 - ECD_02661 0.20 -0.3 2,781,860 - ECD_02661 0.20 +2.1 2,781,865 + ECD_02661 0.21 +0.7 2,781,917 + ECD_02661 0.25 +0.3 2,781,917 + ECD_02661 0.25 +0.3 2,781,918 - ECD_02661 0.25 -0.2 2,781,952 + ECD_02661 0.28 -0.7 2,782,087 + ECD_02661 0.39 -0.3 2,782,087 + ECD_02661 0.39 -0.4 2,782,165 + ECD_02661 0.45 +0.1 2,782,314 - ECD_02661 0.58 -0.2 2,782,455 + ECD_02661 0.69 -0.3 2,782,455 + ECD_02661 0.69 +0.5 2,782,490 + ECD_02661 0.72 -1.8 2,782,522 + ECD_02661 0.75 -0.5 2,782,528 - ECD_02661 0.76 +0.6 2,782,630 + ECD_02661 0.84 -0.7 2,782,636 + ECD_02661 0.84 -0.1 2,782,659 - ECD_02661 0.86 -1.0 2,782,663 + ECD_02661 0.87 +1.2 2,782,751 + +0.1 2,782,751 + +0.0 2,782,751 + +0.6 2,782,751 + +0.4 2,782,751 + -0.1 2,782,751 + +1.3 2,782,751 + +0.2 2,782,753 + -1.6 2,782,753 + +0.3 2,782,753 + -0.8 2,782,753 + +0.6 2,782,753 + -0.2 2,782,753 + +0.3 2,782,753 + +1.0 2,782,753 + +0.8 2,782,753 + +0.3 2,782,753 + -0.8 2,782,754 - -0.3 2,782,754 - +1.4 2,782,754 - -0.2 2,782,754 - +3.2 2,782,754 - -1.0 2,782,754 - +0.1 2,782,754 - -0.2 2,782,756 + -0.5 2,782,756 + +0.3 2,782,756 + -0.1 2,782,756 + -0.7 2,782,757 - -0.1 2,782,757 - +0.4 2,782,809 + -0.4 2,782,809 + -0.5 2,782,887 + ECD_02662 0.15 +0.1 2,782,888 - ECD_02662 0.15 -0.8 2,782,888 - ECD_02662 0.15 -0.2 2,782,917 + ECD_02662 0.21 +1.4 2,782,917 + ECD_02662 0.21 -0.4 2,782,918 - ECD_02662 0.22 +0.4 2,782,921 + ECD_02662 0.22 -1.1 2,782,921 + ECD_02662 0.22 -0.3 2,782,921 + ECD_02662 0.22 -0.4 2,782,922 - ECD_02662 0.23 +1.1 2,782,986 + ECD_02662 0.37 -0.0 2,782,987 - ECD_02662 0.37 -1.7 2,783,026 + ECD_02662 0.46 -0.1 2,783,028 + ECD_02662 0.46 -0.3 2,783,028 + ECD_02662 0.46 -0.7 2,783,028 + ECD_02662 0.46 -0.4 2,783,028 + ECD_02662 0.46 -0.9 2,783,028 + ECD_02662 0.46 +0.2 2,783,028 + ECD_02662 0.46 -0.8 2,783,028 + ECD_02662 0.46 -0.3 2,783,028 + ECD_02662 0.46 -1.1 2,783,028 + ECD_02662 0.46 +0.0 2,783,028 + ECD_02662 0.46 -0.3 2,783,028 + ECD_02662 0.46 -0.7 2,783,028 + ECD_02662 0.46 -0.0 2,783,028 + ECD_02662 0.46 -0.7 2,783,028 + ECD_02662 0.46 -1.2 2,783,028 + ECD_02662 0.46 -0.2 2,783,028 + ECD_02662 0.46 -1.2 2,783,028 + ECD_02662 0.46 +0.3 2,783,028 + ECD_02662 0.46 +1.7 2,783,028 + ECD_02662 0.46 +0.1 2,783,028 + ECD_02662 0.46 +0.8 2,783,028 + ECD_02662 0.46 +0.5 2,783,028 + ECD_02662 0.46 +0.3 2,783,028 + ECD_02662 0.46 -0.2 2,783,028 + ECD_02662 0.46 +0.5 2,783,028 + ECD_02662 0.46 +0.4 2,783,028 + ECD_02662 0.46 +0.0 2,783,028 + ECD_02662 0.46 -0.7 2,783,029 - ECD_02662 0.47 +0.3 2,783,029 - ECD_02662 0.47 -1.0 2,783,029 - ECD_02662 0.47 -0.4 2,783,029 - ECD_02662 0.47 +0.7 2,783,029 - ECD_02662 0.47 -0.7 2,783,029 - ECD_02662 0.47 -0.4 2,783,029 - ECD_02662 0.47 +0.5 2,783,029 - ECD_02662 0.47 -0.9 2,783,029 - ECD_02662 0.47 +0.1 2,783,029 - ECD_02662 0.47 -2.0 2,783,183 + ECD_02662 0.81 -0.3 2,783,183 + ECD_02662 0.81 +0.1 2,783,184 - ECD_02662 0.82 +0.2 2,783,184 - ECD_02662 0.82 -0.3 2,783,219 + ECD_02662 0.89 +0.8 2,783,219 + ECD_02662 0.89 -0.5 2,783,264 - -0.9 2,783,264 - -0.4 2,783,489 - ECD_02663 0.21 +0.3 2,783,505 - ECD_02663 0.23 +0.7 2,783,505 - ECD_02663 0.23 -0.6 2,783,538 - ECD_02663 0.28 -1.7 2,783,687 + ECD_02663 0.46 +1.0 2,783,701 + ECD_02663 0.48 +1.0 2,783,702 - ECD_02663 0.48 +1.2 2,783,702 - ECD_02663 0.48 +0.2 2,783,727 + ECD_02663 0.51 -1.7 2,783,728 - ECD_02663 0.51 -0.6 2,783,752 + ECD_02663 0.54 +1.2 2,783,753 - ECD_02663 0.54 -1.7 2,783,759 - ECD_02663 0.55 -1.3 2,783,771 + ECD_02663 0.56 -0.4 2,783,771 + ECD_02663 0.56 +0.5 2,783,772 - ECD_02663 0.57 -0.1 2,783,772 - ECD_02663 0.57 -0.9 2,783,772 - ECD_02663 0.57 -0.7 2,783,772 - ECD_02663 0.57 -1.6 2,783,772 - ECD_02663 0.57 +0.4 2,783,772 - ECD_02663 0.57 -0.4 2,783,772 - ECD_02663 0.57 -0.5 2,783,772 - ECD_02663 0.57 -0.4 2,783,772 - ECD_02663 0.57 +0.6 2,783,772 - ECD_02663 0.57 -0.2 2,783,773 + ECD_02663 0.57 -1.2 2,783,773 + ECD_02663 0.57 +1.1 2,783,774 - ECD_02663 0.57 +0.9 2,783,774 - ECD_02663 0.57 -0.7 2,783,774 - ECD_02663 0.57 +1.2 2,783,774 - ECD_02663 0.57 -1.8 2,783,782 - ECD_02663 0.58 +0.4 2,783,818 - ECD_02663 0.62 +0.7 2,783,834 + ECD_02663 0.64 +0.0 2,783,847 - ECD_02663 0.66 +1.0 2,783,859 - ECD_02663 0.67 +0.8 2,783,916 - ECD_02663 0.74 -1.3 2,783,916 - ECD_02663 0.74 -0.6 2,784,026 + ECD_02663 0.88 -1.1 2,784,026 + ECD_02663 0.88 -0.3 2,784,027 - ECD_02663 0.88 +0.5 2,784,027 - ECD_02663 0.88 +1.8 2,784,027 - ECD_02663 0.88 +0.5 2,784,027 - ECD_02663 0.88 -0.1 2,784,064 + +1.2 2,784,065 - +0.4 2,784,107 + -0.1 2,784,108 - -1.3 2,784,108 - -1.5 2,784,108 - -0.4 2,784,108 - -0.5 2,784,108 - +0.5 2,784,112 - -0.0 2,784,112 - -0.3 2,784,112 - -0.1 2,784,122 + -0.8 2,784,122 + -1.4 2,784,122 + +0.3 2,784,122 + -0.8 2,784,123 - +0.3 2,784,123 - +0.5 2,784,123 - +0.9 2,784,123 - -1.0 2,784,123 - +0.7 2,784,123 - +0.6 2,784,123 - -0.1 2,784,123 - -0.3 2,784,123 - -0.9 2,784,123 - -0.9 2,784,123 - -0.3 2,784,123 - +0.1 2,784,123 - -0.2 2,784,123 - +0.2 2,784,123 - +1.2 2,784,123 - +0.1 2,784,123 - -0.3 2,784,136 + +0.5 2,784,171 + +0.2 2,784,194 - +0.2 2,784,202 + -0.0 2,784,203 - -0.3 2,784,203 - -1.1 2,784,203 - -0.8 2,784,203 - -0.9 2,784,206 + +1.1 2,784,206 + +0.6 2,784,207 - -0.1 2,784,219 - +0.7
Or see this region's nucleotide sequence