Strain Fitness in Escherichia coli BL21 around ECD_02662

Experiment: Control_TnA

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02661 and ECD_02662 overlap by 1 nucleotidesECD_02662 and ECD_02663 are separated by 50 nucleotides ECD_02661: ECD_02661 - cysteine sulfinate desulfinase, at 2,781,617 to 2,782,822 _02661 ECD_02662: ECD_02662 - CsdA-binding activator; Fe-S protein, at 2,782,822 to 2,783,265 _02662 ECD_02663: ECD_02663 - tRNA threonylcarbamoyladenosine dehydratase; sulfur acceptor for CsdA, at 2,783,316 to 2,784,122 _02663 Position (kb) 2782 2783 2784Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2781.840 kb on + strand, within ECD_02661at 2781.840 kb on + strand, within ECD_02661at 2781.840 kb on + strand, within ECD_02661at 2781.841 kb on - strand, within ECD_02661at 2781.841 kb on - strand, within ECD_02661at 2781.859 kb on + strand, within ECD_02661at 2781.860 kb on - strand, within ECD_02661at 2781.860 kb on - strand, within ECD_02661at 2781.865 kb on + strand, within ECD_02661at 2781.917 kb on + strand, within ECD_02661at 2781.917 kb on + strand, within ECD_02661at 2781.918 kb on - strand, within ECD_02661at 2781.952 kb on + strand, within ECD_02661at 2782.087 kb on + strand, within ECD_02661at 2782.087 kb on + strand, within ECD_02661at 2782.165 kb on + strand, within ECD_02661at 2782.314 kb on - strand, within ECD_02661at 2782.455 kb on + strand, within ECD_02661at 2782.455 kb on + strand, within ECD_02661at 2782.490 kb on + strand, within ECD_02661at 2782.522 kb on + strand, within ECD_02661at 2782.528 kb on - strand, within ECD_02661at 2782.630 kb on + strand, within ECD_02661at 2782.636 kb on + strand, within ECD_02661at 2782.659 kb on - strand, within ECD_02661at 2782.663 kb on + strand, within ECD_02661at 2782.751 kb on + strandat 2782.751 kb on + strandat 2782.751 kb on + strandat 2782.751 kb on + strandat 2782.751 kb on + strandat 2782.751 kb on + strandat 2782.751 kb on + strandat 2782.753 kb on + strandat 2782.753 kb on + strandat 2782.753 kb on + strandat 2782.753 kb on + strandat 2782.753 kb on + strandat 2782.753 kb on + strandat 2782.753 kb on + strandat 2782.753 kb on + strandat 2782.753 kb on + strandat 2782.753 kb on + strandat 2782.754 kb on - strandat 2782.754 kb on - strandat 2782.754 kb on - strandat 2782.754 kb on - strandat 2782.754 kb on - strandat 2782.754 kb on - strandat 2782.754 kb on - strandat 2782.756 kb on + strandat 2782.756 kb on + strandat 2782.756 kb on + strandat 2782.756 kb on + strandat 2782.757 kb on - strandat 2782.757 kb on - strandat 2782.809 kb on + strandat 2782.809 kb on + strandat 2782.887 kb on + strand, within ECD_02662at 2782.888 kb on - strand, within ECD_02662at 2782.888 kb on - strand, within ECD_02662at 2782.917 kb on + strand, within ECD_02662at 2782.917 kb on + strand, within ECD_02662at 2782.918 kb on - strand, within ECD_02662at 2782.921 kb on + strand, within ECD_02662at 2782.921 kb on + strand, within ECD_02662at 2782.921 kb on + strand, within ECD_02662at 2782.922 kb on - strand, within ECD_02662at 2782.986 kb on + strand, within ECD_02662at 2782.987 kb on - strand, within ECD_02662at 2783.026 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.028 kb on + strand, within ECD_02662at 2783.029 kb on - strand, within ECD_02662at 2783.029 kb on - strand, within ECD_02662at 2783.029 kb on - strand, within ECD_02662at 2783.029 kb on - strand, within ECD_02662at 2783.029 kb on - strand, within ECD_02662at 2783.029 kb on - strand, within ECD_02662at 2783.029 kb on - strand, within ECD_02662at 2783.029 kb on - strand, within ECD_02662at 2783.029 kb on - strand, within ECD_02662at 2783.029 kb on - strand, within ECD_02662at 2783.183 kb on + strand, within ECD_02662at 2783.183 kb on + strand, within ECD_02662at 2783.184 kb on - strand, within ECD_02662at 2783.184 kb on - strand, within ECD_02662at 2783.219 kb on + strand, within ECD_02662at 2783.219 kb on + strand, within ECD_02662at 2783.264 kb on - strandat 2783.264 kb on - strandat 2783.489 kb on - strand, within ECD_02663at 2783.505 kb on - strand, within ECD_02663at 2783.505 kb on - strand, within ECD_02663at 2783.538 kb on - strand, within ECD_02663at 2783.687 kb on + strand, within ECD_02663at 2783.701 kb on + strand, within ECD_02663at 2783.702 kb on - strand, within ECD_02663at 2783.702 kb on - strand, within ECD_02663at 2783.727 kb on + strand, within ECD_02663at 2783.728 kb on - strand, within ECD_02663at 2783.752 kb on + strand, within ECD_02663at 2783.753 kb on - strand, within ECD_02663at 2783.759 kb on - strand, within ECD_02663at 2783.771 kb on + strand, within ECD_02663at 2783.771 kb on + strand, within ECD_02663at 2783.772 kb on - strand, within ECD_02663at 2783.772 kb on - strand, within ECD_02663at 2783.772 kb on - strand, within ECD_02663at 2783.772 kb on - strand, within ECD_02663at 2783.772 kb on - strand, within ECD_02663at 2783.772 kb on - strand, within ECD_02663at 2783.772 kb on - strand, within ECD_02663at 2783.772 kb on - strand, within ECD_02663at 2783.772 kb on - strand, within ECD_02663at 2783.772 kb on - strand, within ECD_02663at 2783.773 kb on + strand, within ECD_02663at 2783.773 kb on + strand, within ECD_02663at 2783.774 kb on - strand, within ECD_02663at 2783.774 kb on - strand, within ECD_02663at 2783.774 kb on - strand, within ECD_02663at 2783.774 kb on - strand, within ECD_02663at 2783.782 kb on - strand, within ECD_02663at 2783.818 kb on - strand, within ECD_02663at 2783.834 kb on + strand, within ECD_02663at 2783.847 kb on - strand, within ECD_02663at 2783.859 kb on - strand, within ECD_02663at 2783.916 kb on - strand, within ECD_02663at 2783.916 kb on - strand, within ECD_02663at 2784.026 kb on + strand, within ECD_02663at 2784.026 kb on + strand, within ECD_02663at 2784.027 kb on - strand, within ECD_02663at 2784.027 kb on - strand, within ECD_02663at 2784.027 kb on - strand, within ECD_02663at 2784.027 kb on - strand, within ECD_02663at 2784.064 kb on + strandat 2784.065 kb on - strandat 2784.107 kb on + strandat 2784.108 kb on - strandat 2784.108 kb on - strandat 2784.108 kb on - strandat 2784.108 kb on - strandat 2784.108 kb on - strandat 2784.112 kb on - strandat 2784.112 kb on - strandat 2784.112 kb on - strandat 2784.122 kb on + strandat 2784.122 kb on + strandat 2784.122 kb on + strandat 2784.122 kb on + strandat 2784.123 kb on - strandat 2784.123 kb on - strandat 2784.123 kb on - strandat 2784.123 kb on - strandat 2784.123 kb on - strandat 2784.123 kb on - strandat 2784.123 kb on - strandat 2784.123 kb on - strandat 2784.123 kb on - strandat 2784.123 kb on - strandat 2784.123 kb on - strandat 2784.123 kb on - strandat 2784.123 kb on - strandat 2784.123 kb on - strandat 2784.123 kb on - strandat 2784.123 kb on - strandat 2784.123 kb on - strandat 2784.136 kb on + strandat 2784.171 kb on + strandat 2784.194 kb on - strandat 2784.202 kb on + strandat 2784.203 kb on - strandat 2784.203 kb on - strandat 2784.203 kb on - strandat 2784.203 kb on - strandat 2784.206 kb on + strandat 2784.206 kb on + strandat 2784.207 kb on - strandat 2784.219 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_TnA
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2,781,840 + ECD_02661 0.18 +0.3
2,781,840 + ECD_02661 0.18 +0.1
2,781,840 + ECD_02661 0.18 -1.0
2,781,841 - ECD_02661 0.19 +0.7
2,781,841 - ECD_02661 0.19 -1.0
2,781,859 + ECD_02661 0.20 +0.4
2,781,860 - ECD_02661 0.20 -0.3
2,781,860 - ECD_02661 0.20 +2.1
2,781,865 + ECD_02661 0.21 +0.7
2,781,917 + ECD_02661 0.25 +0.3
2,781,917 + ECD_02661 0.25 +0.3
2,781,918 - ECD_02661 0.25 -0.2
2,781,952 + ECD_02661 0.28 -0.7
2,782,087 + ECD_02661 0.39 -0.3
2,782,087 + ECD_02661 0.39 -0.4
2,782,165 + ECD_02661 0.45 +0.1
2,782,314 - ECD_02661 0.58 -0.2
2,782,455 + ECD_02661 0.69 -0.3
2,782,455 + ECD_02661 0.69 +0.5
2,782,490 + ECD_02661 0.72 -1.8
2,782,522 + ECD_02661 0.75 -0.5
2,782,528 - ECD_02661 0.76 +0.6
2,782,630 + ECD_02661 0.84 -0.7
2,782,636 + ECD_02661 0.84 -0.1
2,782,659 - ECD_02661 0.86 -1.0
2,782,663 + ECD_02661 0.87 +1.2
2,782,751 + +0.1
2,782,751 + +0.0
2,782,751 + +0.6
2,782,751 + +0.4
2,782,751 + -0.1
2,782,751 + +1.3
2,782,751 + +0.2
2,782,753 + -1.6
2,782,753 + +0.3
2,782,753 + -0.8
2,782,753 + +0.6
2,782,753 + -0.2
2,782,753 + +0.3
2,782,753 + +1.0
2,782,753 + +0.8
2,782,753 + +0.3
2,782,753 + -0.8
2,782,754 - -0.3
2,782,754 - +1.4
2,782,754 - -0.2
2,782,754 - +3.2
2,782,754 - -1.0
2,782,754 - +0.1
2,782,754 - -0.2
2,782,756 + -0.5
2,782,756 + +0.3
2,782,756 + -0.1
2,782,756 + -0.7
2,782,757 - -0.1
2,782,757 - +0.4
2,782,809 + -0.4
2,782,809 + -0.5
2,782,887 + ECD_02662 0.15 +0.1
2,782,888 - ECD_02662 0.15 -0.8
2,782,888 - ECD_02662 0.15 -0.2
2,782,917 + ECD_02662 0.21 +1.4
2,782,917 + ECD_02662 0.21 -0.4
2,782,918 - ECD_02662 0.22 +0.4
2,782,921 + ECD_02662 0.22 -1.1
2,782,921 + ECD_02662 0.22 -0.3
2,782,921 + ECD_02662 0.22 -0.4
2,782,922 - ECD_02662 0.23 +1.1
2,782,986 + ECD_02662 0.37 -0.0
2,782,987 - ECD_02662 0.37 -1.7
2,783,026 + ECD_02662 0.46 -0.1
2,783,028 + ECD_02662 0.46 -0.3
2,783,028 + ECD_02662 0.46 -0.7
2,783,028 + ECD_02662 0.46 -0.4
2,783,028 + ECD_02662 0.46 -0.9
2,783,028 + ECD_02662 0.46 +0.2
2,783,028 + ECD_02662 0.46 -0.8
2,783,028 + ECD_02662 0.46 -0.3
2,783,028 + ECD_02662 0.46 -1.1
2,783,028 + ECD_02662 0.46 +0.0
2,783,028 + ECD_02662 0.46 -0.3
2,783,028 + ECD_02662 0.46 -0.7
2,783,028 + ECD_02662 0.46 -0.0
2,783,028 + ECD_02662 0.46 -0.7
2,783,028 + ECD_02662 0.46 -1.2
2,783,028 + ECD_02662 0.46 -0.2
2,783,028 + ECD_02662 0.46 -1.2
2,783,028 + ECD_02662 0.46 +0.3
2,783,028 + ECD_02662 0.46 +1.7
2,783,028 + ECD_02662 0.46 +0.1
2,783,028 + ECD_02662 0.46 +0.8
2,783,028 + ECD_02662 0.46 +0.5
2,783,028 + ECD_02662 0.46 +0.3
2,783,028 + ECD_02662 0.46 -0.2
2,783,028 + ECD_02662 0.46 +0.5
2,783,028 + ECD_02662 0.46 +0.4
2,783,028 + ECD_02662 0.46 +0.0
2,783,028 + ECD_02662 0.46 -0.7
2,783,029 - ECD_02662 0.47 +0.3
2,783,029 - ECD_02662 0.47 -1.0
2,783,029 - ECD_02662 0.47 -0.4
2,783,029 - ECD_02662 0.47 +0.7
2,783,029 - ECD_02662 0.47 -0.7
2,783,029 - ECD_02662 0.47 -0.4
2,783,029 - ECD_02662 0.47 +0.5
2,783,029 - ECD_02662 0.47 -0.9
2,783,029 - ECD_02662 0.47 +0.1
2,783,029 - ECD_02662 0.47 -2.0
2,783,183 + ECD_02662 0.81 -0.3
2,783,183 + ECD_02662 0.81 +0.1
2,783,184 - ECD_02662 0.82 +0.2
2,783,184 - ECD_02662 0.82 -0.3
2,783,219 + ECD_02662 0.89 +0.8
2,783,219 + ECD_02662 0.89 -0.5
2,783,264 - -0.9
2,783,264 - -0.4
2,783,489 - ECD_02663 0.21 +0.3
2,783,505 - ECD_02663 0.23 +0.7
2,783,505 - ECD_02663 0.23 -0.6
2,783,538 - ECD_02663 0.28 -1.7
2,783,687 + ECD_02663 0.46 +1.0
2,783,701 + ECD_02663 0.48 +1.0
2,783,702 - ECD_02663 0.48 +1.2
2,783,702 - ECD_02663 0.48 +0.2
2,783,727 + ECD_02663 0.51 -1.7
2,783,728 - ECD_02663 0.51 -0.6
2,783,752 + ECD_02663 0.54 +1.2
2,783,753 - ECD_02663 0.54 -1.7
2,783,759 - ECD_02663 0.55 -1.3
2,783,771 + ECD_02663 0.56 -0.4
2,783,771 + ECD_02663 0.56 +0.5
2,783,772 - ECD_02663 0.57 -0.1
2,783,772 - ECD_02663 0.57 -0.9
2,783,772 - ECD_02663 0.57 -0.7
2,783,772 - ECD_02663 0.57 -1.6
2,783,772 - ECD_02663 0.57 +0.4
2,783,772 - ECD_02663 0.57 -0.4
2,783,772 - ECD_02663 0.57 -0.5
2,783,772 - ECD_02663 0.57 -0.4
2,783,772 - ECD_02663 0.57 +0.6
2,783,772 - ECD_02663 0.57 -0.2
2,783,773 + ECD_02663 0.57 -1.2
2,783,773 + ECD_02663 0.57 +1.1
2,783,774 - ECD_02663 0.57 +0.9
2,783,774 - ECD_02663 0.57 -0.7
2,783,774 - ECD_02663 0.57 +1.2
2,783,774 - ECD_02663 0.57 -1.8
2,783,782 - ECD_02663 0.58 +0.4
2,783,818 - ECD_02663 0.62 +0.7
2,783,834 + ECD_02663 0.64 +0.0
2,783,847 - ECD_02663 0.66 +1.0
2,783,859 - ECD_02663 0.67 +0.8
2,783,916 - ECD_02663 0.74 -1.3
2,783,916 - ECD_02663 0.74 -0.6
2,784,026 + ECD_02663 0.88 -1.1
2,784,026 + ECD_02663 0.88 -0.3
2,784,027 - ECD_02663 0.88 +0.5
2,784,027 - ECD_02663 0.88 +1.8
2,784,027 - ECD_02663 0.88 +0.5
2,784,027 - ECD_02663 0.88 -0.1
2,784,064 + +1.2
2,784,065 - +0.4
2,784,107 + -0.1
2,784,108 - -1.3
2,784,108 - -1.5
2,784,108 - -0.4
2,784,108 - -0.5
2,784,108 - +0.5
2,784,112 - -0.0
2,784,112 - -0.3
2,784,112 - -0.1
2,784,122 + -0.8
2,784,122 + -1.4
2,784,122 + +0.3
2,784,122 + -0.8
2,784,123 - +0.3
2,784,123 - +0.5
2,784,123 - +0.9
2,784,123 - -1.0
2,784,123 - +0.7
2,784,123 - +0.6
2,784,123 - -0.1
2,784,123 - -0.3
2,784,123 - -0.9
2,784,123 - -0.9
2,784,123 - -0.3
2,784,123 - +0.1
2,784,123 - -0.2
2,784,123 - +0.2
2,784,123 - +1.2
2,784,123 - +0.1
2,784,123 - -0.3
2,784,136 + +0.5
2,784,171 + +0.2
2,784,194 - +0.2
2,784,202 + -0.0
2,784,203 - -0.3
2,784,203 - -1.1
2,784,203 - -0.8
2,784,203 - -0.9
2,784,206 + +1.1
2,784,206 + +0.6
2,784,207 - -0.1
2,784,219 - +0.7

Or see this region's nucleotide sequence